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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 4 |
| Model size | 762 |
| Cds size | 678 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2243.5972.1 >prot_H-paniculata_contig2243.5972.1 ID=prot_H-paniculata_contig2243.5972.1|Name=mRNA_H-paniculata_contig2243.5972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MISAVARRSRICAAHSTVDRIISRSVSSTAARCSPCRRCNPWNHYQHGYA
RTAAFDHRRRRSSAYDRIGDSGSRRELSCFSRTEQSQASTVSGAATTLDS
RRSSSADVANGGDDSGAAVCVSSTTTDENKQQAVKSSARRRKRAAKKGSD
GDVADSAEAAAVRAREVLEAYKLAESGSDLPPLGAFGNVSDEVDFGDCES
EQAPGGPGAGPGEEEATEPKKEKGRG back to topmRNA from alignment at H-paniculata_contig2243:13255..17596- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2243.5972.1 ID=mRNA_H-paniculata_contig2243.5972.1|Name=mRNA_H-paniculata_contig2243.5972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4342bp|location=Sequence derived from alignment at H-paniculata_contig2243:13255..17596- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTTGATTTCGCGAGAATCGTGAGCGGGGGCTACGATTGGCAGCTGTCGC
CTGGTAAGTCCTGTTGCAGGCGAACCAGATGCATCGTTGCTTTTTGAGCG
TGACCGACTGAAGAGCGGCATGTCAAGAAAAGGAGAAAGCTGTTTCTACT
GATTTGTCTGTCAGTCTCTCTATATTTCTCGTTTCGAACGAGCGATGCAG
TCTCAGTGCTGGATGCCTTCTCTCCTCAGGCGCCACGGCTTCCACGCTCC
ATACCCTGCTTTCCCTCTCGTCTCCTGTTCAAGCTTATAACAGACAATAA
GACCACAAGGCTCACTTGCCCGCCTAGGTTGCTCCTCCTTGAAGATGAAA
TGGAGCAAATGGAAGACGAGATGGAGCAAAATGGAAAACGAAACAGACCA
GATTTGGGGCCTCTCTGCCGTTCCTAGACACCACCTGACTGCTGGTGATG
TGTACTCTGCAACTGACAATCCAAATGCAAGTGACAACCGCGAGTCTAAA
GGAGAAATGTCGACAGCTGTCGATTGATGAAGTCACACAGTTTGGGAACT
CGGGTGGGTAGCTCCAGGAACCCGGTTCAGTCTCAAGTGCACAGACCAAA
TTTTTAATTTTTGACGTGGTCGAGTATGTATCGCAGATATTCTAGGTCAT
ACTCATTGTCAAAGGCAGACACTATACCCAGTTATAGTGAGGACCTTGCC
TGTGTCGCTGTGTTGGAGAGCTGATGATAAGTGCCGTGGCACGACGCTCA
AGAATCTGCGCTGCTCATAGTACCGTAGATAGGATTATCTCTCGCTCCGT
TTCTTCCACTGCCGCTCGCTGCTCACCTTGCAGAAGATGCAATCCGTGGA
ATCACTACCAACATGGATATGCGAGGACTGCGGCGTTCGATCATCGTCGA
AGGAGGTCCAGTGCATACGATAGGTGATGCATGTAGGCGTGGTATTTTTT
TTACTTGCTAGTCGCAGCACGATTTTTGTGTACATTGGAAGCAGCTACTG
TTCTGTAGTCCGTGACAGAATGTGCTGCTAGAGCACTGCTATGTAACAGC
CTTAATTTATGGTGTCCATCGACCTGATATGAGATACAAATACTTCAATA
CTATAACTAGTACTTGTATTGCTCACCAGTTCAGACGGGGGATGCTTGTG
ATCCTTTACTGACCGTCTTTTGAACAGGCACCACCGTTGTCCACCCGTCA
AAGCTTACGCGGCACACAACGCAACGGAATAGCCTTCGGCAACACATCGT
TTTCCTGGTTCTATTGGCATAGACCGACACGGATGATGATCCGCTCCGAC
TGAATCGCCGTGACATAATTAATGGCTCTGTAACTGCATGTTCACTGAGT
ATAATCATTACATAAATCCTATCGACTGAGCGTTTGCTTTTTCAAATCGC
GCTTTTTGCAATCGGCACTCGGTCATGTTCTTGTTCAACCCCACCCACAG
GATTGGCGATAGTGGTAGCAGGCGAGAGTTATCCTGCTTCTCAAGGACCG
AGCAGAGCCAGGCGTCGACAGTATCTGGAGCAGCCACCACCCTTGACAGC
CGCCGCAGCAGCAGCGCTGATGTAGCCAATGGCGGCGATGATAGTGGCGC
TGCTGTGTGCGTATCCTCGACGACCACGGACGAAAACAAGCAGCAAGCTG
TCAAATCGTCGGCAAGACGACGGAAACGCGCAGGTGCGTTCCACCAGATA
GTAGACAGCGGACTGACTGCCGTTGTACACACGGAGTACTTGATTTTTTG
GTGGGGTCGTGGGCCAGTCGGCGGCCTCCTGCCAGGCGTTTCTTGGTCGC
GATCTGTTGAGGCACGGTCTACAGTAGTACTAGTTGTTGAAAACAGCGTA
AGTAGGTGACTGAACCTACTATTAATAGTATTAAGTTCTCTTGGTGATAC
TTCTTGTAAACAACATATCTACTATGGGACATTTTATTTAGACGCTCGCC
ATATCTCGAGAAGCACAACGAATTTTGTAATGCGGATTTTTGCAAGGGTG
TGTTCTGTAGGGTACTGGTACTCTCGGTAGGGTATTGGAAATGTTACAGA
ACTCACAAAAGCACCGGTAGGGTATTGGAAGTGTTACAGAACCTACCGAA
GTGTAGGGTATTGTAGCGGATGCGTCACAGAACCTACAGAAAGTGATGGG
GTATGTTTCGATCTCAGTACCGGTACCCCCGGTACCCTACAGAACACACC
CTTGGAATTTTTGCATCAGCACCGTGAGTGCAAAACCCAAAGACTTGCAC
GGAAGAATTTTGGGAAAAAAGAAAAATCAAAACTCGAAAAGTTACAGCCA
AAAAAACATATTTTCCTATGGTATATGAGATTTTTCGTAAAATCGGCCTT
TAGACCGTGTCATAGGCCACCTCTTACAGGAAGCTGTGATATTTGAAGGT
GTTCCAAACTTGGACAGGCTGCAGCTGCTGCGAAGAGAACAGAGTGAATT
CATATCCTCAGTTTCGAAAAAAGCGCGGGGAAAACGCCAGCTGTAGTTAG
CAAACGAGATAGAGGTCAGCGGTAGGCACGATGTTTGTGGTTGGTTGACA
CACAGCAAGGAACATCTCATCCTCATCTTTGGACCAATCAAACATATCTT
CATCCTCAGTGACTGACACCTTCGCGGTAGGGTGTGCGACAAGGGTAGCT
TGTGTGCGAGGTGTAGCGGGGGTGGCCTGTTGTACCTCATTCTCTGTACT
CTTGGAAAGTCAGATAGATACTGCCGTGTTTTCTGAAGATGCCGCTGGTG
CTTTGAGTCATGCCTAGACGATGTTGCTCCTGCCTTTCGTCATGTTCTTC
AGATTAAATGATCCAAGTTCCGAAAATCCTACTAAAATAATTATGAATCT
CCCCCCCCCCCAAGTTGACTTGAATATTAAAAAATATATATATCCACTTT
TTCAAGAATTTCCATGTCCCGTAAGAAGTGGTCTTGCGGCGTTGAAAATG
AGAAATGATGTTTGTGATTCTTGGGCAATCGCGCCTCCATTCCAACATTT
CATGGGAACGAGAAATGGTATTTGGACACTATATCGAAGAGTACTGTACT
GTACTGTCGGTTGTCTGTTGGACTCTCCGCGGCAAAAAATGCAAGTAAAG
GCTGGCGTTCTATACAATGCCAAATCCCATCGCTCTGAAAAGTTGTGATA
TTTGGGCTCCATTTCCTACGAGATTGGGAGGTCGGATAGGAAATATGTTT
TTTTAGCTCGTGGGAAATGGGCCATTTTTCATTTTCAAAAATGCCCAAAA
ATCACAAGGGTGTGTTGTGTAGGGTATTTGTAGGGTATTGGAAATGTTAC
AGACTTCACAGAAGTTCTCTGTAGGGTACTTACAGACGGTAACTACCCCC
GGTATTTTCGTGGGTACCCTACGGAACACACCCTTGAAAAATTATCCCAT
GAGATTTGGTCTTGGACCTCTACAATCCCCTTTTTTGCTAATATCTCGAT
TTCACGGAATAAAAATAGAAATCCCCCTGGCCACTTTTTCAGTATCAACA
ATAGAATCATGATGCAAAAAAAATACCAATAAACGTCTTTGTATCGACGG
AATTACTTCCGAAAAACAGAACATAGTGGCATTTGGCCCATAAATGCGAA
AAAAAAAATGTTCCGATATACGTTTCCAGCACAAGATTGGCCTCAAATGA
GCAGCAGGACGAATCTCCAAAAATACACTTGTTTTCTTCGCGCCTTGTGC
CAAGGAAGCCCCCCCAGCAACTATCTCAGCTGTGCGTACCCTTGCGCCAA
AAAGTCTCTTTCGCTGGTACTTCAAGTACATTAGTACCGTATCTGTGTTT
ACGGTATACCAGGTAGAGAAATAGTCGAGAGGAGATCAGGGGTGATGTAT
GCAGCCATACAGTATAATACAGTTGCGGAAAGTTTCAAGCACACACTTTT
CCGACGCCATCGCCAAAAAATACAACAATGACAACCATGAATATTTTTTT
ACTAAATATTCTGCGGTAATTGAGACTACTGGTGGATTTCGATAGTATTC
ATGTGCAGCAGAGGGAGGGGGGCAAAAAGCGTTCCACATTCAACTGAAGC
GATCAACCAATCTATTAAGCCTACCGAATCAATCATTCCTCTCACAGCCA
AGAAAGGAAGCGACGGAGACGTAGCTGACTCCGCCGAAGCCGCCGCGGTT
CGAGCGCGAGAGGTGTTGGAAGCCTATAAACTCGCCGAGTCCGGGTCTGA
CCTGCCCCCTCTCGGCGCCTTTGGTAACGTCTCGGACGAGGTGGACTTCG
GCGACTGCGAGTCAGAGCAGGCGCCCGGGGGTCCAGGGGCAGGGCCGGGG
GAAGAAGAAGCGACAGAGCCCAAGAAGGAGAAGGGAAGGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2243:13255..17596- >mRNA_H-paniculata_contig2243.5972.1 ID=mRNA_H-paniculata_contig2243.5972.1|Name=mRNA_H-paniculata_contig2243.5972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig2243:13255..17596- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATAAGTGCCGTGGCACGACGCTCAAGAATCTGCGCTGCTCATAGTAC
CGTAGATAGGATTATCTCTCGCTCCGTTTCTTCCACTGCCGCTCGCTGCT
CACCTTGCAGAAGATGCAATCCGTGGAATCACTACCAACATGGATATGCG
AGGACTGCGGCGTTCGATCATCGTCGAAGGAGGTCCAGTGCATACGATAG
ATGATAAGTGCCGTGGCACGACGCTCAAGAATCTGCGCTGCTCATAGTAC
CGTAGATAGGATTATCTCTCGCTCCGTTTCTTCCACTGCCGCTCGCTGCT
CACCTTGCAGAAGATGCAATCCGTGGAATCACTACCAACATGGATATGCG
AGGACTGCGGCGTTCGATCATCGTCGAAGGAGGTCCAGTGCATACGATAG
GATTGGCGATAGTGGTAGCAGGCGAGAGTTATCCTGCTTCTCAAGGACCG
AGCAGAGCCAGGCGTCGACAGTATCTGGAGCAGCCACCACCCTTGACAGC
CGCCGCAGCAGCAGCGCTGATGTAGCCAATGGCGGCGATGATAGTGGCGC
TGCTGTGTGCGTATCCTCGACGACCACGGACGAAAACAAGCAGCAAGCTG
TCAAATCGTCGGCAAGACGACGGAAACGCGCAGGATTGGCGATAGTGGTA
GCAGGCGAGAGTTATCCTGCTTCTCAAGGACCGAGCAGAGCCAGGCGTCG
ACAGTATCTGGAGCAGCCACCACCCTTGACAGCCGCCGCAGCAGCAGCGC
TGATGTAGCCAATGGCGGCGATGATAGTGGCGCTGCTGTGTGCGTATCCT
CGACGACCACGGACGAAAACAAGCAGCAAGCTGTCAAATCGTCGGCAAGA
CGACGGAAACGCGCAGCCAAGAAAGGAAGCGACGGAGACGTAGCTGACTC
CGCCGAAGCCGCCGCGGTTCGAGCGCGAGAGGTGTTGGAAGCCTATAAAC
TCGCCGAGTCCGGGTCTGACCTGCCCCCTCTCGGCGCCTTTGGTAACGTC
TCGGACGAGGTGGACTTCGGCGACTGCGAGTCAGAGCAGGCGCCCGGGGG
TCCAGGGGCAGGGCCGGGGGAAGAAGAAGCGACAGAGCCCAAGAAGGAGA
AGGGAAGGGGGCCAAGAAAGGAAGCGACGGAGACGTAGCTGACTCCGCCG
AAGCCGCCGCGGTTCGAGCGCGAGAGGTGTTGGAAGCCTATAAACTCGCC
GAGTCCGGGTCTGACCTGCCCCCTCTCGGCGCCTTTGGTAACGTCTCGGA
CGAGGTGGACTTCGGCGACTGCGAGTCAGAGCAGGCGCCCGGGGGTCCAG
GGGCAGGGCCGGGGGAAGAAGAAGCGACAGAGCCCAAGAAGGAGAAGGGA
AGGGGG back to top
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