mRNA_H-paniculata_contig22418.5968.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: D8LKT3_ECTSI (APH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT3_ECTSI) HSP 1 Score: 124 bits (310), Expect = 3.460e-29 Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 1 KQEEDAGPFAGLTKVMSDLRGLSAA---VPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADA 252
KQ EDAGP G ++ DLR L A+ V DRV +VH DFR+DNL+FHPTE+RVIAVLDWELSTLGH LADLANLCILHHLPA+A A
Sbjct: 183 KQAEDAGPIEGFDGIVRDLRELIASGSVVQDRVAIVHGDFRIDNLVFHPTESRVIAVLDWELSTLGHPLADLANLCILHHLPASAVA 269
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A6H5L392_9PHAE (APH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L392_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.660e-28 Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 1 KQEEDAGPFAGLTKVMSDLRGLSAA---VPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADA 252
KQ EDAGP G V+ DLR L A+ V DRV +VH DFR+DNL+FHP E RVIAVLDWELSTLGH LADLANLCILHHLPA+A A
Sbjct: 246 KQAEDAGPIEGFDGVVRDLRELIASGSVVQDRVAIVHGDFRIDNLVFHPAEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAAA 332
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A7S2FDT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FDT2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.910e-21 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 1 KQEEDAGPFAGLTKVMSDLRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAA 243
KQEEDA GL +V + + +VPD +L+H DF++DNLIFHPTE RVI +LDWELST+GH + D+ANL ++H P A
Sbjct: 21 KQEEDAPSVDGLREVAEAMALVVDSVPDTASLIHGDFKIDNLIFHPTEPRVIGILDWELSTIGHPMGDVANLSLMHFSPHA 101
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A4D9CXK6_9STRA (APH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXK6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.040e-19 Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 1 KQEEDAGPFAGLTKVMSDLRGLSAA----VPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADAATRGI 267
KQ E+AG F GL +V SD+ S + D+ LVH DF+VDN++FHPTE RVIAVLDWELSTLGH +ADLANL ++ +PA A G+
Sbjct: 186 KQAENAGYFPGLQEVCSDMLLYSEQPGFKMRDQTCLVHGDFKVDNVVFHPTEPRVIAVLDWELSTLGHPMADLANLAMMFFVPAVPRAPISGL 278
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A448YZL2_9STRA (APH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZL2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.870e-19 Identity = 44/90 (48.89%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 1 KQEEDAG-PFAGLTKVMSDLRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADAATRGI 267
+Q E +G P + ++ L +A P+R++L+H DF++DNL+FHPTE RVIAVLDWELST+G +L DLANLC+++ +P + AA G+
Sbjct: 215 RQAELSGTPAPEIERLARQLGEFAAGCPNRISLLHGDFKIDNLVFHPTEPRVIAVLDWELSTVGDSLCDLANLCVMYLMPQSKKAAISGV 304
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A7S0C1G1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1G1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 8.490e-19 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1 KQEEDAGPFAGLTKVMSDLRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLP 237
KQ D GP GL + ++L S PD VTL+H D++VDNLIFHP +VI VLDWELST+G L D+AN+ ++++LP
Sbjct: 51 KQANDIGPVEGLKAIANNLSSASLHCPDNVTLIHGDYKVDNLIFHPVLPKVIGVLDWELSTIGDPLCDVANISMMYYLP 129
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A7S4JTE3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTE3_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 8.880e-19 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1 KQEEDAGPFAGLTKVMSDLRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLP 237
KQ E GP GL +DL S PD TL+H D+++DNL+FHP E RVIAVLDWELST+G L DLANL +++++P
Sbjct: 262 KQAEVVGPVDGLDVAAADLSAGSGGCPDESTLIHGDYKIDNLVFHPVEPRVIAVLDWELSTIGDPLCDLANLSMMYYMP 340
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: W4G0Z2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0Z2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.030e-17 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 31 GLTKVMSD-LRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADAATRGI 267
G K +SD L G ++PD +VH DFR+DN+IFHPTE R++A+LDWELST+GH LAD+A LC L+ +PA G+
Sbjct: 199 GDVKAVSDYLHGAVGSIPDESCIVHGDFRLDNVIFHPTEPRIVALLDWELSTVGHPLADVATLCSLYRVPATTSQMVHGL 278
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: W4G0X8_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0X8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.090e-17 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 31 GLTKVMSD-LRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADAATRGI 267
G K +SD L G ++PD +VH DFR+DN+IFHPTE R++A+LDWELST+GH LAD+A LC L+ +PA G+
Sbjct: 199 GDVKAVSDYLHGAVGSIPDESCIVHGDFRLDNVIFHPTEPRIVALLDWELSTVGHPLADVATLCSLYRVPATTSQMVHGL 278
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Match: A0A7S1YLP5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YLP5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.110e-17 Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 34 LTKVMSDLRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHALADLANLCILHHLPAAADAATRGI 267
L ++ S L + PD V+L H DF+VDNLIFHPTE RV+AVLDWELST+G +L+DLANL + + LP D GI
Sbjct: 12 LEQIASTLAEAAPHCPDYVSLCHGDFKVDNLIFHPTEPRVVAVLDWELSTIGDSLSDLANLSMQYFLPRRKDVGIAGI 89 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22418.5968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22418.5968.1 >prot_H-paniculata_contig22418.5968.1 ID=prot_H-paniculata_contig22418.5968.1|Name=mRNA_H-paniculata_contig22418.5968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp MSDLRGLSAAVPDRVTLVHDDFRVDNLIFHPTEARVIAVLDWELSTLGHAback to top mRNA from alignment at H-paniculata_contig22418:165..2833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22418.5968.1 ID=mRNA_H-paniculata_contig22418.5968.1|Name=mRNA_H-paniculata_contig22418.5968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2669bp|location=Sequence derived from alignment at H-paniculata_contig22418:165..2833+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22418:165..2833+ >mRNA_H-paniculata_contig22418.5968.1 ID=mRNA_H-paniculata_contig22418.5968.1|Name=mRNA_H-paniculata_contig22418.5968.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig22418:165..2833+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |