prot_H-paniculata_contig22405.5965.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22405.5965.1
Unique Nameprot_H-paniculata_contig22405.5965.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.560e-44
Identity = 72/135 (53.33%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    1 MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRG-GCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAP 134
            MVCAHM+EAGHRG  AT+ RL+ YC W  ME +V +FV+QCLHC+DS++G +VPRPLGE +H T   EV+HFD+L++GAS PL +  +    G  Y+LV++DD+S +VWLEP+  CT  + A  +L WC + G P
Sbjct: 1297 MVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVP 1431          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.040e-43
Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 0
Query:    1 MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRG-GCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAP 134
            M+CAHM+EAGHRGV AT++RL  YC W+ M+ +V EFV+QCLHC+DS+SG  VPRP GE +H     EVLHFD+LH+G S PL    +    G  YLLV++DD+S + W+EP+  CT ++ A  +L WC   G P
Sbjct:  419 MLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVP 553          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.240e-43
Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 0
Query:    1 MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRG-GCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAP 134
            M+CAHM+EAGHRGV AT++RL  YC W+ M+ +V EFV+QCLHC+DS+SG  VPRP GE +H     EVLHFD+LH+G S PL    +    G  YLLV++DD+S + W+EP+  CT ++ A  +L WC   G P
Sbjct: 1195 MLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVP 1329          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 5.390e-29
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 0
Query:   30 MEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRG-GCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAP 134
            M+ +V EFV+QCLHC+DS+SG  VPRP GE +H     EVLHFD+LH+G S PL    +    G  YLLV++DD+S + W+EP+  CT ++ A  +L WC   G P
Sbjct:    1 MDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVP 106          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A6H5J9M0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9M0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.760e-28
Identity = 48/106 (45.28%), Postives = 72/106 (67.92%), Query Frame = 0
Query:   30 MEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPL-KEHEVIRGGCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAP 134
            ME +V +FV+ CL+C+DS++G +VP+PLGE  H T   EV+ FD+L++GAS  L K+      G  Y+LV++DD+S +VWLEP+  CT ++ +  +L WC   G P
Sbjct:    1 MEEHVTDFVKHCLNCMDSKAGEKVPQPLGETAHGTRPGEVVLFDYLYVGASGLLGKDSLDEEDGFKYILVMMDDMSNWVWLEPTGACTARLTSQHLLTWCKTLGVP 106          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: R7Q542_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q542_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 1.520e-24
Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    1 MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRGGCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFG 132
            MVC+H    GHRG+DAT + +     W+ ++ +V   VR C HC+ +R+G  VPRPLG  +H     EV+H DFL++G     K+         YLL+L DD+S Y+WL P+ + T   AA  +  W  VFG
Sbjct:  290 MVCSHCGSIGHRGMDATGSVIRENFWWSSLDQDVKALVRGCYHCIVTRTGEVVPRPLGHAIHGDRPNEVVHMDFLYMGQGLSNKK---------YLLILRDDLSSYIWLWPTEDTTAASAAEALCVWIGVFG 412          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A0G4J8M9_PLABS (Integrase catalytic domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8M9_PLABS)

HSP 1 Score: 99.4 bits (246), Expect = 1.400e-21
Identity = 51/137 (37.23%), Postives = 73/137 (53.28%), Query Frame = 0
Query:    1 MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRGG---CPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAP 134
            +V  H   AGHR  + T   +     W  +  ++    +QCLHC+ +R G +VPRPLGE LH  + ++VL  D+L++         E +RG      Y+L+L DD SGYV L PS E T +VAA  + +W   F  P
Sbjct:  610 LVIGHCASAGHRASEVTKQMITERFFWTKINQDIEAMCQQCLHCITTRGGKKVPRPLGEALHGHQPFDVLTMDYLYV---------EPVRGADHKYKYILLLKDDFSGYVRLIPSAEATSRVAAEALNQWIADFATP 737          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A2P4WY00_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WY00_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.150e-21
Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 0
Query:    2 VCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRGGCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFG 132
            +  H   AGHRG+D T+  ++    W  +  +V  FVR+CLHC+    G  +PRPLGE +H+    E++H+D+L++GAS              Y+LV+ DD S YVW     + T     T ++ W   FG
Sbjct: 1294 IVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLYMGAS---------TSDDMYILVIKDDASKYVWFFAVPDATADTTYTCLVEWFAAFG 1415          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A0G4IJW2_PLABS (Integrase_H2C2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJW2_PLABS)

HSP 1 Score: 92.8 bits (229), Expect = 1.000e-20
Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = 0
Query:    1 MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRGG---CPYLLVLLDDVSGYVWLEPSLECTVKVAA 121
            +V  H   AGHR  + T   +     W  +  ++    +QCLHC+ +R G +VPRPLGE+LH  + ++VL  D+L++         E +RG      Y+L+L DD SGYV L PS E T +VAA
Sbjct:  100 LVIGHCASAGHRASEVTKQMITERFFWTKINQDIEAMCQQCLHCITTRGGKKVPRPLGEVLHGHQPFDVLTMDYLYV---------EPVRGADHKYKYILLLKDDFSGYVRLIPSAEATSRVAA 214          
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Match: A0A6A3N928_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N928_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.250e-20
Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 0
Query:    2 VCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSGSRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRGGCPYLLVLLDDVSGYVWLEPSLECTVKVAATTVLRWCTVFG 132
            +  H   AGHRG+D T+  ++    W  +  +V  FVR+CLHC+    G  +PRPLGE +H+    E++H+D+L +GAS    +         Y+LV+ DD S YVW     + T   + T ++ W   FG
Sbjct:  625 IVGHFGVAGHRGLDTTLGAISKRFWWTDLATDVEYFVRRCLHCVSVVGGPPIPRPLGEAMHAERPNELIHWDYLFMGASTSDDK---------YILVIKDDASKYVWFFVVPDATADTSYTCLMYWFAAFG 746          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22405.5965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE2.560e-4453.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE1.040e-4352.59Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L7F6_9PHAE2.240e-4352.59Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS6_9PHAE5.390e-2949.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9M0_9PHAE3.760e-2845.28Integrase catalytic domain-containing protein n=1 ... [more]
R7Q542_CHOCR1.520e-2440.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0G4J8M9_PLABS1.400e-2137.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P4WY00_9STRA5.150e-2135.11Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A0G4IJW2_PLABS1.000e-2038.71Integrase_H2C2 domain-containing protein n=1 Tax=P... [more]
A0A6A3N928_9STRA1.250e-2035.11Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.70coord: 1..48
e-value: 2.5E-8
score: 36.0
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 4..47
e-value: 5.5E-11
score: 42.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 60..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22405contigH-paniculata_contig22405:2509..2916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22405.5965.1mRNA_H-paniculata_contig22405.5965.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22405 2491..2916 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22405.5965.1 ID=prot_H-paniculata_contig22405.5965.1|Name=mRNA_H-paniculata_contig22405.5965.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MVCAHMQEAGHRGVDATVNRLAAYCVWAGMEANVAEFVRQCLHCLDSRSG
SRVPRPLGELLHSTEVWEVLHFDFLHLGASDPLKEHEVIRGGCPYLLVLL
DDVSGYVWLEPSLECTVKVAATTVLRWCTVFGAPGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2
IPR012337RNaseH-like_sf