prot_H-paniculata_contig224.5964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig224.5964.1
Unique Nameprot_H-paniculata_contig224.5964.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length268
Homology
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BLAST of mRNA_H-paniculata_contig224.5964.1 vs. uniprot
Match: A0A6H5K8M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M6_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.950e-66
Identity = 133/204 (65.20%), Postives = 161/204 (78.92%), Query Frame = 0 
Query:    1 MGKAR--GPKRKEAPARKRLQINNPSSSGLLQKQSRRNKGSGVHCTEGLDGGAAVGKRTLGQMLLVPNKRARGGKRRRQRSNAPVPNQPKSSETATIQAEYASVDARASAKKASEESQRLQAPVKVRLVPATAMLRMPSQGNVSLQALRASSSARMVDALLQSITDDPAPDALPARPVRSAGRKRKGNPYAALQDDPSDEEYDS 202
            MGKA   G KRKEAPARK+LQ     +SGLL K + ++   G H   G DG AA+GKRTL Q LL PNKRARGGKRRR+ S    P++P SSETA IQAEYA+VDAR  AK+ SE+++R++APV++RL P+T  LRMPS+G VS+ +LRASSSARMV+ALLQSITD+PAPDA P+RPVRSAGRKRKGNP+AAL+DD SD + DS
Sbjct:    1 MGKANRGGQKRKEAPARKQLQ-GKGGNSGLLHKNNHKH---GAHRAAGFDGAAAMGKRTLAQQLLQPNKRARGGKRRRKSSG--TPSKPGSSETAVIQAEYAAVDAREKAKEDSEKARRVRAPVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALEDDGSDSDSDS 198
[Close]
BLAST of mRNA_H-paniculata_contig224.5964.1 vs. uniprot
Match: D7G3V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V9_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 3.200e-39
Identity = 82/112 (73.21%), Postives = 99/112 (88.39%), Query Frame = 0 
Query:   86 QPKSSETATIQAEYASVDARASAKKASEESQRLQAPVKVRLVPATAMLRMPSQGNVSLQALRASSSARMVDALLQSITDDPAPDALPARPVRSAGRKRKGNPYAALQDDPSD 197
            +P SSETA IQAEYA+VDAR  AK+ SE+++RL+APV++RL P+T  LRMPS+G VS+ +LRASSSARMV+ALLQSITD+PAPDA P+RPVRSAGRKRKGNP+AAL DD SD
Sbjct:   19 EPGSSETAVIQAEYAAVDAREKAKEDSEKARRLRAPVRIRLAPSTTELRMPSEGEVSMASLRASSSARMVEALLQSITDEPAPDAPPSRPVRSAGRKRKGNPFAALGDDGSD 130
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig224.5964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8M6_9PHAE1.950e-6665.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3V9_ECTSI3.200e-3973.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig224contigH-paniculata_contig224:33271..38076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig224.5964.1mRNA_H-paniculata_contig224.5964.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig224 33271..38295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig224.5964.1 ID=prot_H-paniculata_contig224.5964.1|Name=mRNA_H-paniculata_contig224.5964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=268bp
MGKARGPKRKEAPARKRLQINNPSSSGLLQKQSRRNKGSGVHCTEGLDGG
AAVGKRTLGQMLLVPNKRARGGKRRRQRSNAPVPNQPKSSETATIQAEYA
SVDARASAKKASEESQRLQAPVKVRLVPATAMLRMPSQGNVSLQALRASS
SARMVDALLQSITDDPAPDALPARPVRSAGRKRKGNPYAALQDDPSDEEY
DSNKIQGEQSDDTFSSRNAALAGSGLRSVKCPPLTFAAPSGFGGANSTSS
GRMSFAGGAVGGGGSGAS
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