prot_H-paniculata_contig22391.5961.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22391.5961.1
Unique Nameprot_H-paniculata_contig22391.5961.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig22391.5961.1 vs. uniprot
Match: D7FR29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR29_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.090e-23
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    4 QIVEIVDKWEGNLASLMFKHLVPGFWDIWHQLGSPPAEQQPYSVVKRGGGYEIREYAPRLVVK 66
            ++V+I D WEGN  +L  KHLVPGFWDIWHQLGSPPAE+ PY VVKR  GY IREYAPR+  +
Sbjct:   90 KVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRMATQ 152          
BLAST of mRNA_H-paniculata_contig22391.5961.1 vs. uniprot
Match: A0A6H5L2A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.670e-23
Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    4 QIVEIVDKWEGNLASLMFKHLVPGFWDIWHQLGSPPAEQQPYSVVKRGGGYEIREYAPRLVVK 66
            ++V+I D WEGN  +L  KHLVPGFWDIWHQLGSPPAE+ PY VVKR  GY IREYAPRL  +
Sbjct:  263 KVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRLATQ 325          
BLAST of mRNA_H-paniculata_contig22391.5961.1 vs. uniprot
Match: A0A835YSS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.210e-15
Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    4 QIVEIVDKWEGNLASLMFKHLVPGFWDIWHQLGSPPAEQQPYSVVKRGGGYEIREYAPRLVVK 66
            +I+ + D WE      + +HL+PGFWDIW+Q  SP AE+ P+ V++RG GYE+ ++APRLV++
Sbjct:  131 RIISMEDTWEEAPVQALIRHLLPGFWDIWNQFCSPIAERYPHKVLRRGRGYEVWQFAPRLVLR 193          
BLAST of mRNA_H-paniculata_contig22391.5961.1 vs. uniprot
Match: A0A6V1P7S5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7S5_HETAK)

HSP 1 Score: 60.1 bits (144), Expect = 5.820e-9
Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0
Query:    4 QIVEIVDKWEGNLASLMFKHLVPGFWDIWHQLGSPPAEQQPYSVVKRGGGYEIREYAPRLVV 65
            ++    D WE +   +      P FWD +H    PPAE   Y V  RG GYE+R+YAPRLVV
Sbjct:  175 RLAAAADTWEQSPYQVALGQCRPRFWDFYHFKAFPPAEFPAYRVAARGEGYEVRDYAPRLVV 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22391.5961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FR29_ECTSI1.090e-2368.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2A9_9PHAE1.670e-2369.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSS2_9STRA7.210e-1547.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1P7S5_HETAK5.820e-943.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22391contigH-paniculata_contig22391:535..732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22391.5961.1mRNA_H-paniculata_contig22391.5961.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22391 535..732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22391.5961.1 ID=prot_H-paniculata_contig22391.5961.1|Name=mRNA_H-paniculata_contig22391.5961.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MTQQIVEIVDKWEGNLASLMFKHLVPGFWDIWHQLGSPPAEQQPYSVVKR
GGGYEIREYAPRLVVK
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