prot_H-paniculata_contig2237.5955.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2237.5955.1
Unique Nameprot_H-paniculata_contig2237.5955.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
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BLAST of mRNA_H-paniculata_contig2237.5955.1 vs. uniprot
Match: D7G2Y7_ECTSI (Similar to TNF receptor associated factor 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.090e-13
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0 
Query:    4 RGPAGVLLARRGRGRTLLQQSERSKARAQAEKALRDEEARLALLEEQRVSQEILAAK 60
            RGPAGV+L RR RGRT LQ +ERS  RA+AEKALR+EEARLAL+E Q+VSQE+ AAK
Sbjct:  119 RGPAGVMLVRRERGRTALQVAERSAKRAKAEKALREEEARLALVEAQKVSQELQAAK 175
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BLAST of mRNA_H-paniculata_contig2237.5955.1 vs. uniprot
Match: A0A6H5L922_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L922_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.970e-8
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:   10 LLARRGRGRTLLQQSERSKARAQAEKALRDEEARLALLEEQRVSQEILAAK 60
            +L RR RG T LQ +ERS  RA+AEKALR+EEARLAL+E Q+VSQE+ AAK
Sbjct:    1 MLMRRERGCTALQVAERSAKRAKAEKALREEEARLALVEAQKVSQELQAAK 51
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2237.5955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2Y7_ECTSI1.090e-1373.68Similar to TNF receptor associated factor 4 n=1 Ta... [more]
A0A6H5L922_9PHAE3.970e-868.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2237contigH-paniculata_contig2237:2051..3046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2237.5955.1mRNA_H-paniculata_contig2237.5955.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2237 2050..3046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2237.5955.1 ID=prot_H-paniculata_contig2237.5955.1|Name=mRNA_H-paniculata_contig2237.5955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
KPYRGPAGVLLARRGRGRTLLQQSERSKARAQAEKALRDEEARLALLEEQ
RVSQEILAAKLSAKAKKKSEKKRENSRKNQSR
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