mRNA_H-paniculata_contig22334.5943.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: D8LNS7_ECTSI (Mitogen-activated protein kinase (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS7_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 3.050e-174 Identity = 255/275 (92.73%), Postives = 262/275 (95.27%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELRSPAAGSSLPEPAVHAGGREAARDGETNKRHSSS 825
RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEML R PLFRGETYLQMLKLI KFVGKPKD SELAFVTNPKAQKFMEDLP+YPPADLRRRFP+AGADAV+LLA+MLV+RPDRRLSVDEALRHPYLRSLRDKKAET A EPVDFADVELAPLNK+NLRRLMHEDVLAYRPELRSPAAGSSLPEPA GGREAARDG + R SSS
Sbjct: 217 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPKDESELAFVTNPKAQKFMEDLPEYPPADLRRRFPSAGADAVDLLARMLVMRPDRRLSVDEALRHPYLRSLRDKKAETTALEPVDFADVELAPLNKNNLRRLMHEDVLAYRPELRSPAAGSSLPEPASRTGGREAARDGSS--RGSSS 489
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: D8LNL4_ECTSI (Mitogen-activated protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNL4_ECTSI) HSP 1 Score: 300 bits (769), Expect = 3.330e-93 Identity = 150/243 (61.73%), Postives = 184/243 (75.72%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELR 726
RL+D+H +YFLYQILC +KYIHSASVLHRDLKPSN+LL+ NCDLKLCDFGLSRGV DE ET +LTEYVVTRWYR+PEIML+ + Y ID+WSVGCIF EML R PLF G Y+ LKLI +GKP +S ++ FVTNP+A++FM LPD P +L +FP+ ADAV+LL++ML+L P+RR+SV++AL HPYL SL D E +A VD+ +E L K NLR L+ EDVL Y PE R
Sbjct: 234 RLTDEHTQYFLYQILCALKYIHSASVLHRDLKPSNVLLNANCDLKLCDFGLSRGVH--DEHETGDLTEYVVTRWYRAPEIMLSVQNYNEAIDVWSVGCIFGEMLGRKPLFAGNDYIHQLKLITSLIGKPTES-DIWFVTNPRARRFMLGLPDTSPVNLGVKFPDVNADAVDLLSKMLILDPNRRISVEQALEHPYLSSLHDDALEPLAESHVDWQCIEAVELTKHNLRLLIFEDVLHYHPECR 473
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: A0A7S2CTH5_9STRA (Mitogen-activated protein kinase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTH5_9STRA) HSP 1 Score: 285 bits (730), Expect = 7.280e-91 Identity = 143/251 (56.97%), Postives = 185/251 (73.71%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELRSPAAGSSL 750
+L+++H+++FLYQ++CG+KYIHSA+VLHRDLKPSNILL+ NCDLKLCDFGLSRG+ + A LTEYVVTRWYR+PEIML+ + Y ID+WSVGCIF EML R P+F G Y+ LKLI+K VG P +S EL FVTN KA +F+ LP Y DL + FPNA + ++LL++ML+L P RR+SV++AL HPYL +RD E +A PVD+ DVE LN+DNL RL+ ED +A + E RS + L
Sbjct: 111 QLTNEHIQFFLYQMMCGLKYIHSAAVLHRDLKPSNILLNANCDLKLCDFGLSRGLLEGEGTSGANLTEYVVTRWYRAPEIMLSCQDYSCAIDVWSVGCIFGEMLARKPMFPGSDYIHQLKLIMKLVGTPTES-ELWFVTNQKANRFVLSLPKYDKEDLSKSFPNAEREGLDLLSKMLLLDPARRISVEDALAHPYLAEVRDVDCEAVAPGPVDWGDVETCELNRDNLMRLLVEDFVA-QVEARSKFTAADL 359
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: A0A6V1P443_HETAK (Mitogen-activated protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P443_HETAK) HSP 1 Score: 289 bits (739), Expect = 2.290e-90 Identity = 145/244 (59.43%), Postives = 184/244 (75.41%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETA---ELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPE 720
RL+D+H++YFLYQILCGVKYIHSA+VLHRDLKPSN+LL+ NCDLKLCDFGLSRG++ DEE A +LTEYVVTRWYR+PEIML+ + Y ID+WS+GCIFAEML R PLF G Y+ LKLI K VG P + EL +V NP+A++FM LP P DL +FP+A ADA++LL++ML+L P +R++V+E L HPYL SL D+ E A V++ D+E L K NL+RL+ EDV + PE
Sbjct: 228 RLTDEHIQYFLYQILCGVKYIHSANVLHRDLKPSNVLLNANCDLKLCDFGLSRGLN--DEETPAANGDLTEYVVTRWYRAPEIMLSVQDYSRAIDVWSIGCIFAEMLGRKPLFPGNDYIHQLKLITKVVGTPTED-ELGYVENPRAKRFMLGLPPTPRVDLSTKFPDANADALDLLSKMLILDPSKRINVNECLEHPYLASLHDETLEPTADTNVEWDDIETCELTKKNLQRLIFEDVCHFHPE 468
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: A0A835Z2Y5_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y5_9STRA) HSP 1 Score: 288 bits (736), Expect = 1.020e-89 Identity = 144/251 (57.37%), Postives = 184/251 (73.31%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAAE-YGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELRSPAAGSSL 750
+L+D+H++YFLYQ+LC +KYIHSASVLHRDLKPSN+LL+ NCDLKLCDFGLSRGV+ E +T +LTEYVVTRWYR+PEIML+ + Y ID+WSVGCIF EML R PLF G Y+ LKLI K +GKP ++ +L FV+NP+A++FM LPD PADL RFP A AD + LL++ML L +R+SV +AL HPYL SL D E +A V++ D+E L K NL+ L+ DVL Y PE A +++
Sbjct: 227 KLTDEHIQYFLYQLLCALKYIHSASVLHRDLKPSNVLLNANCDLKLCDFGLSRGVTG--EHDTVDLTEYVVTRWYRAPEIMLSVQNYNEAIDVWSVGCIFGEMLGRKPLFPGNDYIHQLKLITKLIGKPAEA-DLWFVSNPRARRFMLGLPDTAPADLAARFPEASADGIALLSRMLTLDSAKRISVADALAHPYLASLHDATLEPLADSAVNWRDIEEVELTKRNLQLLIFNDVLHYHPECIDQLANANV 474
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: A0A835ZD69_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD69_9STRA) HSP 1 Score: 278 bits (710), Expect = 4.980e-85 Identity = 135/253 (53.36%), Postives = 179/253 (70.75%), Query Frame = 1
Query: 4 LSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVS--------SPDEEETAELTEYVVTRWYRSPEIMLAAEYGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELRSPAA 738
L + H+++F+YQ+LCG+KY+HSA V+HRDLKP+N+L++TNCDLKLCDFGL+R + S D+E +TEYVVTRW+R+PE+ L A+Y ID+WS GCI AEM+L+ PLF G QMLKLI+ F GK D+ +L+FV N KA+ ++ ++PD PADL +FP+A ADA++LL QML PDRR+SV AL HP+L R + E A PVD A VE APL + L+ LM EDV A+RP +PAA
Sbjct: 222 LKEAHMQFFMYQLLCGLKYMHSAQVIHRDLKPANVLINTNCDLKLCDFGLARSLFNTNADDTLSEDDEPGGRMTEYVVTRWWRAPEVFLEAKYNVAIDVWSAGCIMAEMMLKKPLFMGSNTAQMLKLILGFCGKNSDTIDLSFVANRKARTYVSEMPDCAPADLSTKFPDASADALDLLRQMLQFSPDRRISVAAALAHPWLARFRVAEREAPAPAPVDLAAVEAAPLARRALQALMFEDVCAFRPHCAAPAA 474
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: W7U818_9STRA (Mitogen-activated protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U818_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.270e-83 Identity = 137/247 (55.47%), Postives = 184/247 (74.49%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYP----PADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELR 726
+L+D HV++FLYQ+LC +KYIHSA+V+HRDLKPSNILL++NCDLK+CDFGLSRGV +E ++LTEYVVTRWYR+PEIML+ EY ID+W+VGCIF EML R PLF G Y+ LKLI K VG P + ELAFVTN KA++FM +LP P P++L+ ++P+A +A++LL +MLV+ P +R++V EAL PYL SL D ET+A V + D+E L+K NL+R + ED++ + PE +
Sbjct: 264 KLTDDHVQFFLYQMLCALKYIHSANVIHRDLKPSNILLNSNCDLKICDFGLSRGVMPVGTQEASDLTEYVVTRWYRAPEIMLSCPEYTTAIDVWAVGCIFGEMLGRKPLFPGNDYIHQLKLITKLVGTPS-AEELAFVTNHKARRFMLNLPKEPQSSLPSNLKSKYPDASPEALSLLRKMLVIDPAKRITVAEALEQPYLASLHDPVVETMADSDVHWGDIESCELSKVNLQRQILEDMIRFHPEAK 509
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: W7TT92_9STRA (Mitogen-activated protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT92_9STRA) HSP 1 Score: 261 bits (668), Expect = 5.500e-79 Identity = 126/240 (52.50%), Postives = 172/240 (71.67%), Query Frame = 1
Query: 4 LSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAE-LTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRP 717
L+++H+++F+YQ++CG+K+IHSA+V+HRDLKPSNILL+ NCDLK+CDFGL+R + + E A LTEYVVTRWYR+PEIML++ EY ID+W+ GCIF EML R PLF G Y+ LKLI + VG P ++L FV NPKA+ FM LP PP DL +R P +G++A++LL +ML L +R+SVD AL HP+ S+RD+ E + PV + D+E NL+R + EDV A+ P
Sbjct: 228 LTEEHIQFFMYQLMCGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDMGADAATEAANNLTEYVVTRWYRAPEIMLSSQEYSKAIDVWAAGCIFGEMLGRKPLFPGNDYIHQLKLITRIVGTPTSEADLWFVKNPKAKVFMLSLPPSPPQDLTKRLPGSGSEALDLLGRMLQLDYSKRISVDAALSHPFFASVRDEAMEYVCPTPVPWGDLEQCKPTCGNLQRAIWEDVAAFHP 467
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: A0A7S3PAF5_9STRA (Mitogen-activated protein kinase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAF5_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.290e-78 Identity = 129/244 (52.87%), Postives = 177/244 (72.54%), Query Frame = 1
Query: 1 RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAE---LTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGK-PKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRP 717
+LS HV+YF+YQ+L G+KYIHS VLHRDLKPSN+L+++NCDLK+CDFGL+RGV E+ AE LTEYVVTRWYR+PEIMLA EY YPID+WSVGCIFAE++LR PLF G+ Y+ L +I + +GK P+D +L FVT+ KA++FM L + PP RFP DA+++L +ML + P++R+ VDEAL+HP+ L + E ++ P DF+ E L+++ LR+L+ E+V +RP
Sbjct: 197 KLSTDHVQYFIYQVLRGLKYIHSCKVLHRDLKPSNLLVNSNCDLKICDFGLARGVDRATEDGRAETMLLTEYVVTRWYRAPEIMLACHEYSYPIDVWSVGCIFAELILRKPLFPGDDYIDQLTIISEKIGKLPED--DLDFVTSDKAKRFMRKLQNKPPMHFSLRFPGTPMDALDVLRKMLEIHPNKRIGVDEALKHPFFEPLHNPDDEPVSRRPFDFS-FENDKLDRNRLRQLIWEEVGDFRP 437
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Match: A0A485LIZ0_9STRA (Mitogen-activated protein kinase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LIZ0_9STRA) HSP 1 Score: 253 bits (647), Expect = 6.820e-78 Identity = 137/257 (53.31%), Postives = 178/257 (69.26%), Query Frame = 1
Query: 4 LSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGLSRGVSSPDEEETAELTEYVVTRWYRSPEIMLAA-EYGYPIDIWSVGCIFAEMLLRHPLFRGETYLQMLKLIVKFVGKPKDSSELAFVTNPKAQKFMEDLPDYPPADLRRRFPNAGADAVNLLAQMLVLRPDRRLSVDEALRHPYLRSLRDKKAETIAAEPVDFADVELAPLNKDNLRRLMHEDVLAYRPELR---------SPAAGS 744
LSD H++YFLYQIL +KYIHS+SVLHRDLKPSN+LL++NCDLK+CDFGL+RGV PDE+ ELTEYVVTRWYR+PEIML+ EY IDIWS GCIFAE+L R P+F G+ Y+ L++I +G P + EL FVT+ KA++FM+ P+ P L + FPN +A++LL +MLV P +R+SV+EAL HPYL SL + E + +P F + E L K L+ L+ E+V + PE R SP AGS
Sbjct: 142 LSDDHIQYFLYQILRALKYIHSSSVLHRDLKPSNLLLNSNCDLKVCDFGLARGVE-PDEDNM-ELTEYVVTRWYRAPEIMLSTKEYTKAIDIWSTGCIFAELLGRKPMFPGDDYIHQLQIICDKLGTPSEE-ELHFVTSEKARRFMKSQPNKPKIPLEKLFPNVKPNALDLLDKMLVFDPTKRISVEEALEHPYLESLHNNDDEPKSTKPFSF-EFEKENLTKRRLQELISEEVCRFHPEWRQRMSDKDVASPLAGS 394 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22334.5943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22334.5943.1 >prot_H-paniculata_contig22334.5943.1 ID=prot_H-paniculata_contig22334.5943.1|Name=mRNA_H-paniculata_contig22334.5943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp RLSDQHVKYFLYQILCGVKYIHSASVLHRDLKPSNILLSTNCDLKLCDFGback to top mRNA from alignment at H-paniculata_contig22334:665..3899- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22334.5943.1 ID=mRNA_H-paniculata_contig22334.5943.1|Name=mRNA_H-paniculata_contig22334.5943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3235bp|location=Sequence derived from alignment at H-paniculata_contig22334:665..3899- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22334:665..3899- >mRNA_H-paniculata_contig22334.5943.1 ID=mRNA_H-paniculata_contig22334.5943.1|Name=mRNA_H-paniculata_contig22334.5943.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at H-paniculata_contig22334:665..3899- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |