prot_H-paniculata_contig22332.5941.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22332.5941.1
Unique Nameprot_H-paniculata_contig22332.5941.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
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BLAST of mRNA_H-paniculata_contig22332.5941.1 vs. uniprot
Match: D7G862_ECTSI (Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G862_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.170e-39
Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 0 
Query:    4 LAISAYLFNLGFFKLAVLGDYQSSADVLKQAYTLRTPMLGETHELSVQVVVSRGWALTLTGQTELAVDELTSCAEMLLAAGQAPAAERLLRQAMEMAEAPLGVNTYAHVCYTQHINFLK 122
            L ISA LFNLGF +LAVLG++ S+A VL+QA  LR  +LGE H L++Q VVSRGWALTLTG T LAV+ELTS AE LL+AGQ  AA+RLLRQ ++    PLG  TYAH CYTQH N L+
Sbjct:  277 LVISALLFNLGFLRLAVLGEFSSAASVLQQAIELRKAVLGEAHSLTMQAVVSRGWALTLTGDTLLAVEELTSAAEALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSNMLR 395
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22332.5941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G862_ECTSI3.170e-3964.71Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.531
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 18..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22332contigH-paniculata_contig22332:2626..3911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22332.5941.1mRNA_H-paniculata_contig22332.5941.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22332 2626..3917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22332.5941.1 ID=prot_H-paniculata_contig22332.5941.1|Name=mRNA_H-paniculata_contig22332.5941.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MNVLAISAYLFNLGFFKLAVLGDYQSSADVLKQAYTLRTPMLGETHELSV
QVVVSRGWALTLTGQTELAVDELTSCAEMLLAAGQAPAAERLLRQAMEMA
EAPLGVNTYAHVCYTQHINFLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf