prot_H-paniculata_contig22322.5938.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22322.5938.1
Unique Nameprot_H-paniculata_contig22322.5938.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length414
Homology
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 5.210e-96
Identity = 169/453 (37.31%), Postives = 263/453 (58.06%), Query Frame = 0
Query:    3 KELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASH-CTP----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            KE+++  +H V +L+P SS+P    I+GT++VFK K DG+FKARLVV G  Q+ G D G ++AP                                      V+ + APG    +  TG+P V  L++S+YGL QSP +WN T+   L   G+  T SDPCVY   S +  ++L+++ DDIL+TG   +L    + +L ++F +TD+GEV   LGI+V R+ + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+ ++ +Q ++  S P Q ++ A K + RY++ +P +PI Y R + RL  + D+S    P    STTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+ GAL +A N+ +S R+KH+ +R+  +++
Sbjct:  363 KEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRE 814          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 5.550e-96
Identity = 166/451 (36.81%), Postives = 260/451 (57.65%), Query Frame = 0
Query:    5 LNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASH-CTP----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            +++  +H V +L+P SS+P    I+GT++VFK K DG+FKARLVV G  Q+ G D G ++AP                                      V+ + APG    +  TG+P V  L++S+YGL QSP +WN T+   L   G+  T SDPCVY   S +  ++L+++ DDIL+TG   +L    + +L ++F +TD+GEV   LGI+V R+ + GTL +SQ  YV + L+RF M  ANP  T G   + +T   +D Q+L     K YQ+M GS+++L QCT+FD+ ++ +Q ++  S P Q ++ A K + RY++ +P +PI Y R + RL  + D+S    P    STTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+ GAL +A N+ +S R+KH+A+R+  +++
Sbjct:    1 MDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRE 450          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 4.100e-95
Identity = 168/453 (37.09%), Postives = 261/453 (57.62%), Query Frame = 0
Query:    3 KELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASH-CTP----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            KE+ +  +H V  L+P SS+P    I+GT++VFK   DG+FKARLVV G  Q+ G D G ++AP                                      V+ + APG    +  TG+P V  L++S+YGL QS  +WN T+   L  +G+  T SDPCVY   S +  ++L+++ DDIL+TG   +L    + +L ++F +TD+GEV   LGI+V R+ + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+ ++ +Q ++  S P Q ++ A K + RY++ +P +PI Y R + RL  + D+S    P    STTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+ GAL +A N+ +S R+KH+A+R+  +++
Sbjct:  207 KEMYNLRKHNVYILVPLSSVPEGEKILGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRE 658          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 3.680e-93
Identity = 170/452 (37.61%), Postives = 254/452 (56.19%), Query Frame = 0
Query:    4 ELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASH-CTP----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            E+ +  +H+V   +  S +P D  I  TR+VFK+KAD +FKARLV  G  Q+ G   G  +AP                                      V+ + APG E+  PTTG+  V  L+KS+YGL QSP++WN  I + L   G+  T SDPCVY   S D   +L+++ DDIL+TG    +    + +LM+ F +TD+GEV   +GIEV R+ + GTL +SQ  Y   +L R+ M  ANP  TPG   + +T   +D QLL     + +QA+ GSL++L QCTR+D+ ++V Q  R  + P Q H+ A K + RY++  PD+PI Y + + RL  + D+S    P    STTG +FF   GL+ + ++ Q + A +T EAEL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHIA+RF  L++
Sbjct:  241 EMGNLAKHKVFKKVRISLVPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 691          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 8.810e-87
Identity = 160/434 (36.87%), Postives = 244/434 (56.22%), Query Frame = 0
Query:    3 KELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASHCTP-----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGLQLTS-CEVRSDNRGALHLAAN 394
            KE+++  +H V +L+P SS+P    I+GT++VFK K DG+FKA LVV G  Q+ G D GS++AP                                      V+ + APG    +  TG+P V  L++S+YGL QSP +WN T+   L+  G+  T  DPCVY   S +  ++L+++ DDIL+TG   +L +D + +L ++F +TD+GEV   LGI+V R+ + GTL +SQ  YV ++L+RF M  ANP  T G   + +T   +D Q+L     K YQ+M  S+++L QCTRFD+ ++ +Q ++  S P Q +L A K + RY++ +P +PI Y R +  L    D+S         STTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ IY+     E   +      + SD+ GAL +A N
Sbjct:  100 KEMDNLRKHNVYNLVPLSSVPKGEEILGTKFVFKKKLDGRFKAHLVVGGHRQEPGQDYGSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGGDQQL-VDQKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYISNFMTEFNFKTFGWVPINSDSTGALTVAGN 531          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 6.140e-86
Identity = 166/459 (36.17%), Postives = 259/459 (56.43%), Query Frame = 0
Query:    3 KELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVD---------------CG-------------------STFAPESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLG-------YFDASH-CTP----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQG-IYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            KE+++  +H V +L+P SS+P    I+GT++VFK K DG+FKARL V G  Q+ G D               C                    +      V+ + APG    +  T +P V  L++S+YGL QSP +WN T+   L   G+  T SDPCVY   S ++ ++ S++ DDIL+TG   +L    + +L ++F +TD+GEV   LGI+V R+ + GTL +SQ  YV ++L+RF M  ANP  TPG   + +T   +D Q+L     K YQ+M GS+++L QCTRFD+ ++ +Q ++  S P Q ++ A K + RY++ +P +PI Y R + RL         + D+S    P    STTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++  +Y+     EL  +   S  + SD+ GAL +A N+ +S R+KH+A+R+  +++
Sbjct:  588 KEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLAVGGHRQEPGQDYRNAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATEEPMVYKLERSLYGLLQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRE 1045          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.010e-85
Identity = 172/469 (36.67%), Postives = 247/469 (52.67%), Query Frame = 0
Query:    1 MRKELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTG-PTDRLPMDVRN------------KLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASHCT-----PSTTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGL--QLTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            +++E+ S    +V  L+P S++P     I ++WVFK KADG FK R+V QGW+Q  G+DCGST+AP                                    E VF +Q PGFE      G   VM L KS+YGL QSP  W +TI   L  +GF    SDPCVY    N   I L+L+ DD+L+ G  +D +   + +            KL  +F +TDLGE S  LG+++ R+ +  TL +SQ  Y  S+L+RF MS + PT TPG  ++ +    ED+ LLD   T++YQ +VGSL+++ Q  R+DI ++  Q AR M+ P++ H+VA K   RY+    D  ITY +   +L  + D++         ST+  +   AN  + F S LQ +TA ST EAELVA A   K+ ++   +  ELG   +     V  DN   LH   N  +SSR+KHIA+RF  +++
Sbjct:  149 LKREMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFE-VKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRE 615          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 2.380e-85
Identity = 174/455 (38.24%), Postives = 248/455 (54.51%), Query Frame = 0
Query:    3 KELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTG-PTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASHCT-----PSTTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGL--QLTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            +E+ S  + +V  L+P S++P +   I ++WVFK KADG FK R+V QGW+Q  G+DCGST+AP                                    E VF +Q PGFE      G   VM L KS+YGL QSP  W +TI   L  +GF    SDPCVY    N   I L+L+ DD+L+ G  +D + M V+ KL  +F +TDLGE SL LG+E+ R+ +  TL +SQ  Y  S+L+RF +S + PT TPG  ++ +    ED+ LLD   T++YQ +VGSL+++ Q  R+DI ++  Q AR M+ P++ H+VA K   RY+    D  ITY +   +L  + D++         ST+  +   AN  + F S LQ +TA ST EAELVA A    + ++   +  ELG   +     V  DN   LH   N  +SSR+KHIA+RF  +++
Sbjct: 1172 REMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFE-VKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISM-VKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRE 1623          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 8.460e-85
Identity = 169/427 (39.58%), Postives = 240/427 (56.21%), Query Frame = 0
Query:    3 KELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP-------ESVFCKQAP-GFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTG-PTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASHCT-----PSTTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGL--QLTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            +E+ S  + +V  L+P S +P +   I ++WVFK KADG FK R+V QGW+Q  G+DCGST+AP         V C              G   VM L KS+YGL QSP  W +TI   L  +GF    SDPCVY    N   I L+L+ DD+L+ G  +D + M V+ KL  +F +TDLGE SL L +E+ R+ +  TL +SQ  Y  S+L+RF MS + PT TPG  ++ +    ED+ LLD   T++YQ +VGSL+++ Q  R+DI ++  Q AR M+ P++ H+VA K   RY+    D  ITY +   +L  + D++         ST+  +   AN  + F S LQ +TA ST EAELVA A   K+ ++   +  ELG   +     V  DN   LH   N  +SSR+KHIA+RF  +++
Sbjct:  530 REMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISM-VKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDT-LLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRE 954          
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Match: A0A6H5KDK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK0_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.270e-79
Identity = 155/451 (34.37%), Postives = 242/451 (53.66%), Query Frame = 0
Query:    5 LNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQGWSQKHGVDCGSTFAP------------------------------------ESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVTGPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKYVLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGSLIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPITYSRCEPRLLGYFDASH-CTP----STTGIMFFFANGLVHFSSRLQKITASSTTEAELVALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSKYSSRSKHIAIRFAALKD 413
            +++  +H V +L+P SS+P    I+GT++VFK   DG+FKARLVV G+ Q+ G D G ++AP                                      V+ + APG    +  TG+P V  L++S+YGL Q    W  T              SDPCVY   S +  ++L+++ DDIL+TG   +L    + +L ++F +TD+GEV   LGI+V R+ + GTL +SQ  YV ++L+RF M  ANP                  Q+L     K YQ+M GS++ L QCTRFD+ ++ +Q ++  S P Q ++ A K   RY++ +P +PI Y R + RL  + D+S    P    STTG +FF A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+ GAL +A N+ +S R+K +A+R+  +++
Sbjct:    1 MDNLWKHNVYNLVPFSSVPKGEKILGTKFVFKKDLDGRFKARLVVGGYRQEPGQDYGRSYAPVCRIGGIRMTCAIGCHHNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQ----WKRT-------------QSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANP-----------------DQILGPTDKKIYQSMTGSILNLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHDVRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNATHSQRTKLVALRYFFIRE 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22322.5938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE92_9PHAE5.210e-9637.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE5.550e-9636.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE4.100e-9537.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE3.680e-9337.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JDU8_9PHAE8.810e-8736.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJR8_9PHAE6.140e-8636.17Integrase catalytic domain-containing protein n=11... [more]
A0A6H5JME8_9PHAE1.010e-8536.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE2.380e-8538.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE8.460e-8539.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KDK0_9PHAE1.270e-7934.37Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 21..66
e-value: 2.4E-10
score: 40.5
coord: 67..219
e-value: 2.3E-31
score: 109.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..410
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 91..408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22322contigH-paniculata_contig22322:6..1355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22322.5938.1mRNA_H-paniculata_contig22322.5938.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22322 3..1355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22322.5938.1 ID=prot_H-paniculata_contig22322.5938.1|Name=mRNA_H-paniculata_contig22322.5938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=414bp
MRKELNSFDEHQVADLIPASSIPSDHTIIGTRWVFKVKADGKFKARLVVQ
GWSQKHGVDCGSTFAPESVFCKQAPGFEKTHPTTGQPYVMSLKKSIYGLR
QSPNVWNHTIFNELRSMGFTPTVSDPCVYSKGSNDTYIMLSLFADDILVT
GPTDRLPMDVRNKLMNKFTITDLGEVSLTLGIEVLRNEQTGTLQLSQHKY
VLSVLDRFNMSSANPTKTPGVKTDSTTTTSEDSQLLDAAATKEYQAMVGS
LIFLTQCTRFDICFSVIQAARYMSAPTQQHLVAVKRIFRYVQSHPDVPIT
YSRCEPRLLGYFDASHCTPSTTGIMFFFANGLVHFSSRLQKITASSTTEA
ELVALATCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSKYSSR
SKHIAIRFAALKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2