prot_H-paniculata_contig22319.5937.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22319.5937.1
Unique Nameprot_H-paniculata_contig22319.5937.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length325
Homology
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 199 bits (506), Expect = 2.550e-58
Identity = 107/268 (39.93%), Postives = 163/268 (60.82%), Query Frame = 0
Query:   55 EFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLL 322
            E K+ + R F +K+LG L   LGIE+ R+R + TI ++Q +YI+ + + +G ++C+ ++          V+ S          Y  +VG+LMY  T  RPDIA AV + A+  E   + ++   KRI +YL T  DLG++F G + G  + G  DANWA D+  R+STTGY+F L+G AISW S++Q  V  SSTE EY+A     +E V+LR+LL  +G  C G+TT F++N+  I L+K    H RTKHI L++H +RE++ + ++
Sbjct:   12 EIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCK-AVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELI-GYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVI 277          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A1J3I7B7_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I7B7_NOCCA)

HSP 1 Score: 197 bits (500), Expect = 1.550e-56
Identity = 116/358 (32.40%), Postives = 190/358 (53.07%), Query Frame = 0
Query:    7 VFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAF-------SPFLSRHTVYEFKQD-----------------------------IIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGA-GVQESSRGRSG---KSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI 324
            + S    +D++LE MDV  A+L+  +EE + ++ P  F          L R ++Y  KQ                              + + F MKDLG  SR+LG+++ RDR  GT+ +SQ +YI +VLK +G  E + ++  + +      + +  R       + T Y   VGSLMYA+ G+RPD+A+AV   +R M +P R +++  K + RYL       + F  ++    +EG  D+++A D+  R+S TG+IFK+ G  +SW S  Q +V  S+TE EY+A     KE ++L+ L E +GFG  G+  +  +++S + L+K S  H RTKHI  ++H IR+ + +G +K+
Sbjct:    1 MLSAVVNYDYELEQMDVKTAFLHGDLEERILMQQPEGFIKKGDENKVCLLRKSLYGLKQSPRQWNLLLYVDDMLIASGSMAEIRLVKESLSKKFEMKDLGKASRILGMDIIRDREKGTLKLSQENYIEKVLKAFGMTEAKPTITPLATHFRLKSLTKDERKEEAIHMEGTPYASAVGSLMYAMIGSRPDLAFAVGVISRFMSNPGRDHWTAVKWVLRYLRGASQDCLTFT-KNKDFSIEGFCDSDYATDLDKRRSVTGFIFKVWGNTVSWRSNLQSVVALSTTEAEYMALSSAVKEAIWLKSLCEELGFGA-GAVKIHCDSQSALALAKNSVHHERTKHIATKYHFIRDIVADGTVKL 356          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A6A3CDW5_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CDW5_HIBSY)

HSP 1 Score: 206 bits (525), Expect = 3.540e-56
Identity = 113/327 (34.56%), Postives = 197/327 (60.24%), Query Frame = 0
Query:    1 MPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLS---RHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECR--GSLWAVLSDIGAGVQESSRGRSGKSTE--YGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREG 320
            + T+  V ++ A  D  LE +DV  A+L+  ++EE+++ L P     ++   +  + E K  + R F MKDLGS +++L +++ RDR N  I +SQ +Y++++L  +   +C+   +   +   + + +  SS     K +   Y   VGSLM+A+   RPDIA AV   +R M +P +++++T KRI RY+    ++ + + G  +   + G VD+++A D+   KSTTGY+FK+ GGA+SW S+ Q +V  S+TE EYVAA +  KE ++L+ LLE +G   +   ++F +++S ++L++    H RTKHI +++H IRE++ EG
Sbjct:  736 LTTVRVVLAMCATLDLHLEQLDVKTAFLHGNLKEEIYM-LQPEDDMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILEMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKLISTPLPINFKLSSSMSPSSEEERMKMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMTNPGKEHWNTVKRILRYIKGTSNVALCYGG--SNLLINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQSVVATSTTEAEYVAATQASKEAIWLKMLLEELGHNQE-YVSVFCDSQSALHLARNPSFHSRTKHIRVQYHFIREKVEEG 1058          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A2N9I0R0_FAGSY (Integrase catalytic domain-containing protein n=13 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I0R0_FAGSY)

HSP 1 Score: 206 bits (523), Expect = 5.310e-56
Identity = 125/342 (36.55%), Postives = 183/342 (53.51%), Query Frame = 0
Query:    1 MPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAF--------------SPFLSRHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECR------GSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLL 322
            + T+  V  + A  +  LE +DV  A+L+  +EE++++  P  F               P L R T    K+ + + F MKDLG   ++LG+ + RDR NGT+ +SQ  Y++++L  +  DE +      GS + +  D     ++     S     Y   +GSLMYA+   RPDIA+AV   +R M +P ++++   K I RYL       + F G      L G VD++ A DV  RKSTTGY++ L G A+SW SR Q++V  S+TE EYVA  E GKEMV+L+  LE +G   K    L  +++S I L+K    H RTKHI LR+H IR  +  G L
Sbjct:  751 LTTIRLVLGIVATENLHLEQLDVKTAFLHGDLEEDIYMSQPQGFIVQGKENLMICSLQGPVLRRLTT--LKKQLSKQFAMKDLGPAKQILGMRIIRDRANGTLKLSQTEYVKKILSRFSMDEAKPVSTPLGSHFRLTKDQSPKTEQEQAYMS--KVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYMSNPGKQHWEAVKWILRYLKGTLGTSLCFTGADMK--LTGYVDSDLAGDVDTRKSTTGYVYTLGGTAVSWVSRLQKIVALSTTEAEYVAVTEAGKEMVWLQGFLEELGQRQK-KGILHSDSQSAIFLAKNPAFHSRTKHIQLRYHFIRSLLDGGQL 1085          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A2N9GEP0_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GEP0_FAGSY)

HSP 1 Score: 202 bits (515), Expect = 7.130e-56
Identity = 114/322 (35.40%), Postives = 184/322 (57.14%), Query Frame = 0
Query:    6 AVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLSRHTVYEFKQD---IIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSG----KSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREG 320
            AV +L A+ D +LE +DV  A+L+  +EEE+F+  P  F    + + V   K+    + + F MKDLG+  ++LG+E+ RDR    + +SQ +YI++VL+ +   + +    ++ +       +  +            Y   VG LMYA+   RPD+A+AV   +R M +P R++++  K IFRYL    + GI+F+ +   + + G VDA++A +V DR+STTGY+F L  G I W S  Q +V  S+TE EY+A  E  KE ++L+ L++ +G   +G   +  +++S I L+K    H RTKHI +R+H IRE I  G
Sbjct:  382 AVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKLKSLLYKEFEMKDLGAAKKILGMEIHRDRDARKLWLSQKNYIKKVLEKFSMLDAKPVSTSLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSEGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTG 702          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A2N9HA88_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HA88_FAGSY)

HSP 1 Score: 204 bits (520), Expect = 1.150e-55
Identity = 117/337 (34.72%), Postives = 186/337 (55.19%), Query Frame = 0
Query:    6 AVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLSRHTVYEFKQDII------------------RCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSG----KSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREG 320
            AV +L A+ D +LE +DV  A+L+  +EEE+F++ P  F    + + V   K+ +                   + F MKDLG+  ++LG+E+RRDR    + +SQ +YIR+VL+ +   + +     + +       +  +            Y   VG LMYA+   RPD+A+AV   +R M +P R++++  K IFRYL    + GI+F+ +   + + G VDA++A +V DR+STTGY+F L GG I W S  Q +V  S+TE EY+A  E  KE ++L+ L++ +G   +G   +  +++S I L+K    H RTKHI +R+H IRE I  G
Sbjct:  653 AVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIRRDRGARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTG 988          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 192 bits (487), Expect = 1.570e-55
Identity = 97/262 (37.02%), Postives = 158/262 (60.31%), Query Frame = 0
Query:   64 FRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKST-EYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI 324
            F++ D+G +  VLG+ +RRDR  G +TISQ +Y++ +LK +G ++C+     +  + G   QE     +  +T EY  ++G L Y  T  RPD+A AV   ++ M  P ++++   KR+ RY+    + G++F G+S    L G  DA+WA D+  R+ST+GY+F+++G  +SWCS++Q  VT S+TE EYVA     +E+V+LR LL  IG      + + E+N+  I LSK    H RTKHI + +H +RE++ +  + +
Sbjct:   13 FKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPL--EPGKHFQELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINV 272          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 194 bits (493), Expect = 2.790e-55
Identity = 104/268 (38.81%), Postives = 163/268 (60.82%), Query Frame = 0
Query:   55 EFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLL 322
            E K+ + R F +K+LG L   LGIE+ R+R + TI ++Q +YI+ + + +G ++C+ ++          V+ +          Y  +VG+LMY  T  RPDIA AV + A+  E   + ++   KRI +YL T  DLG++F G + G  + G  DA+WA D+  R+STTGY+F L+G AISW S++Q  V  SSTE EY+A     +E V+LR+LL  +G  C  +TT+F++N+  I L+K    H RTKHI L++H +RE++ + ++
Sbjct:  108 EIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCK-AVHTPADSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELI-GYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVI 373          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A1S3UK59_VIGRR (uncharacterized protein LOC106766084 n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A1S3UK59_VIGRR)

HSP 1 Score: 193 bits (491), Expect = 2.960e-55
Identity = 114/307 (37.13%), Postives = 172/307 (56.03%), Query Frame = 0
Query:   21 MDVDAAYLNAPVEEELFVKLPPAF-SPFLSRHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNG--HCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREGLLKI 324
            MD+ +A+LN P+EEE++V  PP F     +   + EFK D+ R F M DLGSL   LG+E  R      +   Q  YI E+LK +G + C      V+++I   ++ S+      +T +  +VGSL Y +  +RPD  Y+V   +R M DP + +  T K I  YL    + G+ F  R  G    L+  V+++W  D  DR+ST G++FK  G A SWCSRKQ +V  SS E EY+A+ E  ++  +L  +LE     C     L+ +N+S INL+K   +H R+KHI  R+H +RE++ +G L++
Sbjct:   47 MDMKSAFLNGPLEEEVYVTQPPGFVKKGNNAKAIAEFKTDMKRDFEMNDLGSLGYFLGLEFYRTHDG--MFGHQKRYIGEILKRFGMESCNSVSTPVIANIKLDLEPSNE--KVDATLFKQIVGSLRY-MCNSRPDFCYSVGLVSRFMGDPRQAHLFTVKHILCYLKGTTEYGLFFLKRFEGVTRNLKAWVNSDWCGDQIDRRSTFGFVFKYMGSAFSWCSRKQSIVPLSSYEAEYIASAETARQSTWLDTMLEESLVECCKPIQLWVDNRSAINLAKNPVSHGRSKHIETRFHYLREQVNKGRLEM 348          
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Match: A0A2N9EIR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIR8_FAGSY)

HSP 1 Score: 203 bits (517), Expect = 3.830e-55
Identity = 120/337 (35.61%), Postives = 185/337 (54.90%), Query Frame = 0
Query:    6 AVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSP------FL------------SRHTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKGYGFDECRGSLWAVLSDIGAGVQESSRGRSG----KSTEYGGMVGSLMYALTGNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSNGHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTETEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAHCRTKHIGLRWHGIRERIREG 320
            AV +L A  D +LE +DV  A+L+  +EEE+F++ P  F        FL            S   V   K  + + F MKDLG+  ++LG+E+RRDR    + +SQ +YIR+VL+ +   + +     + +       +  +            Y   VG LMYA+   RPD+A+AV   +R M +P R++++  K IFRYL    + GI+F+ +   + + G VDA++A +V DR+STTGY+F L GG I W S  Q +V  S+TE EY+A  E  KE ++L+ L++ +G   +G   +  +++S I L+K    H RTKHI +R+H IRE I  G
Sbjct:  788 AVLTLVANQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPRREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAIAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTG 1123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22319.5937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB69_PHYRM2.550e-5839.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1J3I7B7_NOCCA1.550e-5632.40Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3CDW5_HIBSY3.540e-5634.56Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A2N9I0R0_FAGSY5.310e-5636.55Integrase catalytic domain-containing protein n=13... [more]
A0A2N9GEP0_FAGSY7.130e-5635.40Integrase catalytic domain-containing protein n=2 ... [more]
A0A2N9HA88_FAGSY1.150e-5534.72Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A7D9D5L2_PARCT1.570e-5537.02Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
H3GB17_PHYRM2.790e-5538.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1S3UK59_VIGRR2.960e-5537.13uncharacterized protein LOC106766084 n=1 Tax=Vigna... [more]
A0A2N9EIR8_FAGSY3.830e-5535.61Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 53..111
e-value: 2.0E-7
score: 30.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 135..319
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 135..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22319contigH-paniculata_contig22319:2439..3693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22319.5937.1mRNA_H-paniculata_contig22319.5937.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22319 2373..3777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22319.5937.1 ID=prot_H-paniculata_contig22319.5937.1|Name=mRNA_H-paniculata_contig22319.5937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
MPTLCAVFSLAAEHDFQLESMDVDAAYLNAPVEEELFVKLPPAFSPFLSR
HTVYEFKQDIIRCFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREV
LKGYGFDECRGSLWAVLSDIGAGVQESSRGRSGKSTEYGGMVGSLMYALT
GNRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLSTVPDLGIMFAGRSN
GHCLEGIVDANWAEDVYDRKSTTGYIFKLDGGAISWCSRKQQLVTWSSTE
TEYVAAGEGGKEMVYLRELLESIGFGCKGSTTLFENNKSVINLSKGSGAH
CRTKHIGLRWHGIRERIREGLLKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like