prot_H-paniculata_contig22291.5928.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22291.5928.1
Unique Nameprot_H-paniculata_contig22291.5928.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A6H5K6W2_9PHAE (Arginyl-tRNA synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.130e-19
Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL  KPRD+A++LA  L  RL  ICE PEIAGPGFINLRL+  FVA +VK MVGD ERLG+
Sbjct:  171 MALAKPLKCKPRDVASSLAEKLGPRLAAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGERLGV 236          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: D8LIS7_ECTSI (Arginine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS7_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.160e-19
Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL  KPRD+A++LA  L  RL  ICE PEIAGPGFINLRL+  FVA +VK MVGD ERLG+
Sbjct:   71 MALAKPLKCKPRDVASSLAEKLGPRLSAICEAPEIAGPGFINLRLRDGFVAAKVKSMVGDGERLGV 136          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A6V1Q9W7_HETAK (Arginine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q9W7_HETAK)

HSP 1 Score: 77.8 bits (190), Expect = 3.420e-15
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL SKPRDIA+ L   LQ      CE PEIAGPGFIN +LK ++V  R+KGM  D +RLG+
Sbjct:  119 MPLAKPLKSKPRDIASKLVEELQT--SAFCEEPEIAGPGFINFKLKPEYVGQRIKGMAMDPDRLGV 182          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A7S1HF10_HEMAN (Arginine--tRNA ligase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HF10_HEMAN)

HSP 1 Score: 77.8 bits (190), Expect = 3.420e-15
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+ L +KPRD+A  L   L+  +G   E PEIAGPGF+NLR K D++ DR+  M  DDERLGI
Sbjct:  148 MPLAKTLKTKPRDVATKLCDELKTTIGDTFEEPEIAGPGFLNLRFKEDYICDRIAAMAKDDERLGI 213          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A5Q4EE49_9CYAN (Arginine--tRNA ligase n=1 Tax=Leptolyngbya sp. DLM2.Bin27 TaxID=2480213 RepID=A0A5Q4EE49_9CYAN)

HSP 1 Score: 76.3 bits (186), Expect = 1.190e-14
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL  KPRDIA  +   L   LG +CEPPEIAGPGFINLRLK++++AD+++ M  D  RLG+
Sbjct:   48 MSLAKPLKQKPRDIATQIVEHLD--LGDLCEPPEIAGPGFINLRLKTEYLADQLRAMQADP-RLGV 110          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A835ZBM0_9STRA (Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.440e-13
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL++KPRDIA  L   L+  +  +C+PP+IAGPGFINLRLK +++  R+  M+ D+ RL I
Sbjct:   88 MALAKPLNAKPRDIAQQLIDALE--VADLCDPPDIAGPGFINLRLKPEYIQSRITAMLEDESRLAI 151          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A1P8WMG5_9PLAN (Arginine--tRNA ligase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WMG5_9PLAN)

HSP 1 Score: 73.2 bits (178), Expect = 1.440e-13
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+ L   PRDIAA + A L   +  +CE PE+AGPGFINL+LK D++A+RV+ + GDD RLG+
Sbjct:   46 MPLAKKLGKAPRDIAAEIVAALD--VADLCETPEVAGPGFINLKLKDDWIAERVRSIAGDD-RLGV 108          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A8J7JA78_9CYAN (Arginine--tRNA ligase n=3 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A8J7JA78_9CYAN)

HSP 1 Score: 71.2 bits (173), Expect = 6.850e-13
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL  KPRDIAA + A L   +  +CEPPEIAGPGFINLR K+ ++ D+++ M   D RLG+
Sbjct:   48 MALAKPLQQKPRDIAAQIVAQLD--VSDLCEPPEIAGPGFINLRFKTQYLEDQLRAMQ-TDPRLGV 110          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A8J7EH91_9CYAN (Arginine--tRNA ligase n=2 Tax=unclassified Nodosilinea TaxID=2628167 RepID=A0A8J7EH91_9CYAN)

HSP 1 Score: 71.2 bits (173), Expect = 6.850e-13
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL  KPRDIA  +   L   L  +CEPPEIAGPGFINLR K+ ++ D++K M  D  RLG+
Sbjct:   48 MSLAKPLKQKPRDIATQIVEKLD--LSNLCEPPEIAGPGFINLRFKTQYLEDQLKAMQADP-RLGV 110          
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Match: A0A2T2W9J6_9CYAN (Arginine--tRNA ligase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2W9J6_9CYAN)

HSP 1 Score: 70.9 bits (172), Expect = 9.360e-13
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFVADRVKGMVGDDERLGI 66
            M LA+PL  KPRDIAA +   L+  +  +CEPPEIAGPGFINLR K+ ++ D+++ M  D  RLG+
Sbjct:   48 MSLAKPLKQKPRDIAAQIVEKLE--VSDLCEPPEIAGPGFINLRFKTQYLEDQLRAMQADP-RLGV 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22291.5928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6W2_9PHAE1.130e-1966.67Arginyl-tRNA synthetase n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIS7_ECTSI1.160e-1966.67Arginine--tRNA ligase n=1 Tax=Ectocarpus siliculos... [more]
A0A6V1Q9W7_HETAK3.420e-1557.58Arginine--tRNA ligase n=1 Tax=Heterosigma akashiwo... [more]
A0A7S1HF10_HEMAN3.420e-1554.55Arginine--tRNA ligase n=1 Tax=Hemiselmis anderseni... [more]
A0A5Q4EE49_9CYAN1.190e-1457.58Arginine--tRNA ligase n=1 Tax=Leptolyngbya sp. DLM... [more]
A0A835ZBM0_9STRA1.440e-1351.52Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A1P8WMG5_9PLAN1.440e-1354.55Arginine--tRNA ligase n=1 Tax=Fuerstiella marisger... [more]
A0A8J7JA78_9CYAN6.850e-1354.55Arginine--tRNA ligase n=3 Tax=Cyanobacteria/Melain... [more]
A0A8J7EH91_9CYAN6.850e-1354.55Arginine--tRNA ligase n=2 Tax=unclassified Nodosil... [more]
A0A2T2W9J6_9CYAN9.360e-1353.03Arginine--tRNA ligase n=3 Tax=Cyanobacteria TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005148Arginyl tRNA synthetase N-terminal domainPFAMPF03485Arg_tRNA_synt_Ncoord: 1..45
e-value: 2.8E-10
score: 40.6
IPR036695Arginyl tRNA synthetase N-terminal domain superfamilyGENE3D3.30.1360.70coord: 1..65
e-value: 1.1E-15
score: 59.5
IPR036695Arginyl tRNA synthetase N-terminal domain superfamilySUPERFAMILY55190Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domaincoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22291contigH-paniculata_contig22291:204..401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22291.5928.1mRNA_H-paniculata_contig22291.5928.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22291 186..401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22291.5928.1 ID=prot_H-paniculata_contig22291.5928.1|Name=mRNA_H-paniculata_contig22291.5928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
MELARPLSSKPRDIAATLAAGLQARLGGICEPPEIAGPGFINLRLKSDFV
ADRVKGMVGDDERLGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005148Arg-tRNA-synth_N
IPR036695Arg-tRNA-synth_N_sf