prot_H-paniculata_contig22286.5925.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22286.5925.1
Unique Nameprot_H-paniculata_contig22286.5925.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length169
Homology
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A0L9VUJ5_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9VUJ5_PHAAN)

HSP 1 Score: 129 bits (325), Expect = 1.840e-34
Identity = 65/166 (39.16%), Postives = 102/166 (61.45%), Query Frame = 0
Query:    1 MYASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            MYA I TR DIA+ V   +R M  P  E+++  KR+ RY+    D+ +  GG +    + G VD+D+  D+D RKSTT Y FKL GG +SW  + Q +   S+TE EY+ A +A K+ ++++ LL  +G   +   T++ D+ SA+++++    H RTKHIGV++H
Sbjct:   16 MYAMICTRPDIAHAVGAVSRFMANPGEEHWNAVKRVLRYIKGTSDVALCFGGSK--FIVRGYVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHK-QNKITVYCDSQSALHIARNPAFHSRTKHIGVQYH 178          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 129 bits (324), Expect = 5.310e-34
Identity = 72/168 (42.86%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    1 MYASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWHGI 168
            M+A+I  R DIA+ V+  +R        +++  KRI RYL    DLGI      +   + G  D+D+  DVD RKSTT Y F +  G I+WC R+QQ  + S+TE EYV A EA K+ ++LR LL  I      +  L+ DN SAI L K    H RTKHI VR+H I
Sbjct:   45 MFAAITARPDIAFAVNVVSRFQNNQGAPHWNAVKRIMRYLKHTKDLGIRY--TFSDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFI 210          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A139WJX6_TRICA (Copia protein-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WJX6_TRICA)

HSP 1 Score: 134 bits (336), Expect = 2.380e-33
Identity = 73/166 (43.98%), Postives = 95/166 (57.23%), Query Frame = 0
Query:    1 MYASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            M+A+I  R DI Y V+  +R    P   + +  KRIF+YL    +LGI      N   L G  DAD+  D+D RKST+ + FKL  G I+WC R+Q+  + S+TE EYV A EA K+ V++  LL  +G  C G   L  DN SAI L K    H RTKHI VR+H
Sbjct:  433 MFAAISARPDIMYAVNVVSRYQNNPTIAHVNAVKRIFKYLKGTKELGILY---NNSGKLIGYSDADYANDIDSRKSTSGFVFKLGDGAITWCSRRQRCISLSTTEAEYVAASEATKEAVWISGLLSEVGEKC-GGVALCVDNQSAIKLVKNPMFHKRTKHIDVRYH 594          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 130 bits (327), Expect = 2.610e-33
Identity = 69/160 (43.12%), Postives = 94/160 (58.75%), Query Frame = 0
Query:    7 TRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            TR D+ Y+V+  +R ME P  ++    KRI RY+      GI    +  G  L G VD+D+  DVD RKST+ Y F L GG +SW  +KQ + T S+TE E+V A     + ++LR +LG IG+     TTLF DN+S I LSK    H R+KHI VR++
Sbjct:  169 TRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYY 327          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 132 bits (332), Expect = 4.120e-33
Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    2 YASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITL----GGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            Y S  TR DI+  V   +  M  P +E+++  KR+ RY+    + G+          NG  L G  DA+W  DVD R+ST+ Y FK+   T+SWC +KQ   T S+TE EYV   +A ++ +++R LL  IG      TT++EDN  AI +SK +  H RTKHI VR+H
Sbjct:  320 YISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFH 488          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A1J3K6I4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K6I4_NOCCA)

HSP 1 Score: 123 bits (309), Expect = 1.380e-32
Identity = 65/168 (38.69%), Postives = 98/168 (58.33%), Query Frame = 0
Query:    1 MYASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWHGI 168
            MYA + TR D+A+ V   +R M  PC+E++   K + RY+    D  +T   K +   ++G  D+D+  D+D R+S T Y F+  G TISW    Q +   S+TE EY+   EA K+ ++L+ ++G +GF  +    +F D+ SAI L+K S  H RTKHI VR+H I
Sbjct:    1 MYAMVSTRPDVAHAVGLVSRFMSSPCKEHWMAVKWVLRYIRNTTDFKLTFT-KSDKFEVKGYCDSDYAADLDRRRSITGYVFQAGGNTISWRSGLQHIVALSTTEAEYMALVEAAKEALWLKGIVGELGFP-QEKVEIFCDSQSAICLAKNSVHHERTKHIDVRYHFI 166          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT)

HSP 1 Score: 131 bits (330), Expect = 2.410e-32
Identity = 68/169 (40.24%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    2 YASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITL----GGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            Y S  TR DI+  V   +  M  P +E+++  KR+ RY+    + G+          NG  L G  DA+W  DVD R+ST+ Y FK+   T+SWC +KQ   T S+TE EYV   +A ++ +++R LL  IG      TT++EDN  AI +SK +  H RTKHI VR+H
Sbjct: 1065 YISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRGLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFH 1233          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 129 bits (324), Expect = 3.630e-32
Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 0
Query:    7 TRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGH-GLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            TR D+ + V   +R M  P   + +T KRI RYL    D GI    +R G   L G  D+D+  D+D  KST+ Y F L+GG ++W  RKQ + T SSTE EYV A     + ++++ +LG IGF      TLF DNTS I LSK +  H ++KHI VR+H
Sbjct:  283 TRPDLMFVVCLISRFMANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYH 443          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 130 bits (328), Expect = 4.480e-32
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    2 YASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITLGGKRNGHGL-EGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWHGI 168
            YASI TR DI+  V   ++ M  P ++++   KR+ RYL    D G+   G  +G  L  G  DADW  D+D RKST+ Y FK+   T+SW  ++Q +   S TE EYV   +A ++ ++LR L   + F     T +FEDN  AI L+K    H RTKHI +++H +
Sbjct: 1083 YASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHV 1250          
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT)

HSP 1 Score: 129 bits (324), Expect = 1.480e-31
Identity = 68/169 (40.24%), Postives = 94/169 (55.62%), Query Frame = 0
Query:    2 YASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITL----GGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLATWSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSKGSGAHCRTKHIGVRWH 166
            Y S  TR DI+  V   +  M  P +E+ +  KR+ RY+    + G+          NG  L G  DA+W  DVD R+ST+ Y FK+   T+SWC +KQ   T S+TE EYV   +A ++ +++R LL  IG      TT++EDN  AI  SK +  H RTKHI VR+H
Sbjct:  668 YISTATRPDISAAVSILSSYMSNPSKEHRNGVKRLLRYIKGTLNFGLKFTTSENDDENGDKLYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIESSKNARFHNRTKHIDVRFH 836          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22286.5925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L9VUJ5_PHAAN1.840e-3439.16Uncharacterized protein n=1 Tax=Phaseolus angulari... [more]
A0A1Y1N3K4_PHOPY5.310e-3442.86Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
A0A139WJX6_TRICA2.380e-3343.98Copia protein-like Protein n=1 Tax=Tribolium casta... [more]
A0A6D2JBX5_9BRAS2.610e-3343.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9JFU5_PARCT4.120e-3340.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1J3K6I4_NOCCA1.380e-3238.69Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9DPP1_PARCT2.410e-3240.24Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1J3D358_NOCCA3.630e-3242.86Retrovirus-related Pol polyprotein from transposon... [more]
A0A7M6DPI8_9CNID4.480e-3239.29Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A6S7H8C9_PARCT1.480e-3140.24Retrovirus-related Pol poly from transposon TNT 1-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..168
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22286contigH-paniculata_contig22286:1243..1749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22286.5925.1mRNA_H-paniculata_contig22286.5925.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22286 238..1824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22286.5925.1 ID=prot_H-paniculata_contig22286.5925.1|Name=mRNA_H-paniculata_contig22286.5925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MYASIETRLDIAYTVHQAARRMEGPCRENFSTCKRIFRYLSTGPDLGITL
GGKRNGHGLEGLVDADWVEDVDHRKSTTEYAFKLNGGTISWCCRKQQLAT
WSSTEVEYVTAEEAGKKTVYLRELLGWIGFGCRGSTTLFEDNTSAINLSK
GSGAHCRTKHIGVRWHGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like