prot_H-paniculata_contig22282.5924.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22282.5924.1
Unique Nameprot_H-paniculata_contig22282.5924.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length133
Homology
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.460e-56
Identity = 96/130 (73.85%), Postives = 114/130 (87.69%), Query Frame = 0
Query:    1 LLLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LLLINGATGIAVGMATNIPPHN+ E+V AT+ LIRNP L D+ LFRL+PAPDFPTGG+     IMGLAGARKLYTTSNGG+T+RATTH+E+ E KGR +RN +V+TE+PYQVNKS LLQ++A+MVNDKK+
Sbjct:  323 LLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGR-----IMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSRRNAVVVTELPYQVNKSSLLQKMAEMVNDKKL 447          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 7.560e-47
Identity = 80/130 (61.54%), Postives = 105/130 (80.77%), Query Frame = 0
Query:    1 LLLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            +LL+NGATGIAVGMATNIPPHN+ E+ DA V LI++P L +  LF++VPAPDFP+GG      IMGLAGARK+YTTSNG +T+RATTH+E    + RP RN +++TE+PY VNK+ LL++IA +VN+KK+
Sbjct:  145 ILLLNGATGIAVGMATNIPPHNLGELTDACVALIKDPELPEADLFKIVPAPDFPSGGT-----IMGLAGARKMYTTSNGSVTLRATTHIESIAQRTRPPRNAVIVTEMPYMVNKAALLEKIAALVNEKKL 269          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.770e-46
Identity = 84/131 (64.12%), Postives = 104/131 (79.39%), Query Frame = 0
Query:    1 LLLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHME-MTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            +LL+NGATGIAVGMATN+PPHN+ E++D T+ LI +PSLSD+ L RL+PAPDFPTGG      IMGL G RKLYT  +G I +RA THME +  G GR  RN IV+TE+PYQVNK+ LL++IADMVN+KK+
Sbjct:  290 MLLLNGATGIAVGMATNVPPHNLGEVLDGTLALIEDPSLSDDKLLRLIPAPDFPTGGD-----IMGLEGPRKLYTNGSGSIVMRAKTHMETIPMGGGRQVRNAIVVTELPYQVNKASLLEKIADMVNEKKM 415          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A3G2BBB4_LIMMA (DNA topoisomerase (ATP-hydrolyzing) n=33 Tax=Oscillatoriales TaxID=1150 RepID=A0A3G2BBB4_LIMMA)

HSP 1 Score: 150 bits (379), Expect = 2.210e-43
Identity = 70/129 (54.26%), Postives = 94/129 (72.87%), Query Frame = 0
Query:    2 LLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LL+NG++GIAVGMATNIPPHN+ E+VD  V LI NP ++D  L R +P PDFPTG K     I+G +G R+ YTT  G IT+R    +E  E +GRP R  I+ITE+PYQ NK+ L+++IA+MVN+K++
Sbjct:   79 LLLNGSSGIAVGMATNIPPHNLNELVDGLVALIHNPEITDTELMRYIPGPDFPTGAK-----ILGRSGIREAYTTGRGSITMRGVAQIETIEHRGRPDREAIIITELPYQTNKAALIEKIAEMVNEKRL 202          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A4P7ZVJ5_9SYNE (DNA gyrase subunit A n=10 Tax=Synechococcales TaxID=1890424 RepID=A0A4P7ZVJ5_9SYNE)

HSP 1 Score: 159 bits (403), Expect = 8.130e-43
Identity = 72/129 (55.81%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    2 LLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LL+NG+TGIAVGMATNIPPHN+ E++D  + LI NP L D  L RL+P PDFPTGG+     I+G +G R++YTT  G +T+R    +E  E KGRP R+ ++ITE+PYQ NK+ L++RIA++VNDKK+
Sbjct:  187 LLLNGSTGIAVGMATNIPPHNLTELIDGLLALIENPELEDRELMRLIPGPDFPTGGQ-----ILGRSGIREMYTTGRGSVTMRGVASIETIEAKGRPDRDAVIITELPYQTNKAALIERIAELVNDKKL 310          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC)

HSP 1 Score: 158 bits (400), Expect = 2.250e-42
Identity = 83/134 (61.94%), Postives = 99/134 (73.88%), Query Frame = 0
Query:    2 LLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHME---MTEGKGRP--KRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LL+NGATGIAVGMATNIPPH + E+VDA + LI+NPSLSDE LF L+PAPDFPTG  +V     GL G RKLY T NG + +RA TH+E    T  KG     R  IV+TE+PY VNKSVLL+R+A MVN+KK+
Sbjct:  184 LLLNGATGIAVGMATNIPPHQLGELVDACIALIKNPSLSDERLFSLIPAPDFPTGALIV-----GLEGVRKLYKTGNGAVVMRARTHVEEIKKTNRKGGQLGSRTAIVVTELPYMVNKSVLLERMATMVNEKKL 312          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A7S4MTJ4_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTJ4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 7.810e-42
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    1 LLLINGATGIAVGMATNIPPHNMAEIVDATVGLIR-----NPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            +LL+NG  GIAVGMATN+PPHN+ E++DA V L          LSD AL+RLVP PDFPTG +     IMG +G++KLY+T NGG+ +RA TH+E    KG   R+ IV+TE+PYQVNK+ LL+RIADMVN+KK+
Sbjct:  278 VLLLNGCAGIAVGMATNVPPHNLGELMDACVALTHAAEDGQDELSDGALYRLVPGPDFPTGAR-----IMGTSGSKKLYSTGNGGVVVRAVTHVEQIVSKGGKPRSAIVVTELPYQVNKAALLERIADMVNEKKI 407          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A2S6VGE7_9CYAN (DNA gyrase subunit A n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A2S6VGE7_9CYAN)

HSP 1 Score: 156 bits (394), Expect = 1.320e-41
Identity = 72/129 (55.81%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    2 LLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LL+NGA+GIAVGMATNIPPHN+ E++D  V LIRNP ++D  L + +P PDFPTGG+V     +G  G R+ YTT  G IT+R   ++E  E +GRP+R  IVITE+PYQ NK+ L++RIA+MVN+K++
Sbjct:  167 LLLNGASGIAVGMATNIPPHNLGELIDGLVALIRNPEITDNQLMQYIPGPDFPTGGQV-----LGTGGIREAYTTGRGSITMRGVANIETIEQRGRPEREAIVITELPYQTNKAALIERIAEMVNEKRL 290          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A7T1HNF7_9SYNE (DNA gyrase subunit A n=4 Tax=Synechococcaceae TaxID=1890426 RepID=A0A7T1HNF7_9SYNE)

HSP 1 Score: 155 bits (393), Expect = 1.830e-41
Identity = 72/129 (55.81%), Postives = 95/129 (73.64%), Query Frame = 0
Query:    2 LLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LL+NG+TGIAVGMATNIPPHN+ E++D  + LI +P L D  L  LVP PDFPTGG+     I+G  G R++YTT  G +T+R    +E  E KGRP R+ ++ITE+PYQ NK+ L++RIA+MVNDKK+
Sbjct:  178 LLLNGSTGIAVGMATNIPPHNLTELIDGLLALIADPELDDRQLLALVPGPDFPTGGQ-----ILGRRGIREMYTTGRGSVTMRGVAMIETVEAKGRPDRDAVIITELPYQTNKAALIERIAEMVNDKKL 301          
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Match: A0A0K1RXJ8_9CHRO (DNA gyrase subunit A n=80 Tax=Chroococcales TaxID=1118 RepID=A0A0K1RXJ8_9CHRO)

HSP 1 Score: 155 bits (393), Expect = 1.890e-41
Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    2 LLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPAPDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKRNTIVITEVPYQVNKSVLLQRIADMVNDKKV 130
            LLING++GIAVGMATNIPPHN+AEI+D TV LI NP L+D  L R +P PDFPTGG      I+G  G ++ YTT  G IT+R    +E  E +GRP R+ I+ITE+PYQ NK+ L+++IAD+VND+K+
Sbjct:  167 LLINGSSGIAVGMATNIPPHNLAEIIDGTVALIHNPDLTDTELQRYIPGPDFPTGGH-----ILGRDGIQEAYTTGRGSITLRGVATIETIEQRGRPDRDAIIITELPYQTNKAALIEKIADLVNDRKI 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22282.5924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKP9_9PHAE1.460e-5673.85DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
A0A836CKD9_9STRA7.560e-4761.54DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
W7TLA9_9STRA3.770e-4664.12DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodo... [more]
A0A3G2BBB4_LIMMA2.210e-4354.26DNA topoisomerase (ATP-hydrolyzing) n=33 Tax=Oscil... [more]
A0A4P7ZVJ5_9SYNE8.130e-4355.81DNA gyrase subunit A n=10 Tax=Synechococcales TaxI... [more]
A0A0G4ESH9_VITBC2.250e-4261.94DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrel... [more]
A0A7S4MTJ4_9STRA7.810e-4257.04DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odonte... [more]
A0A2S6VGE7_9CYAN1.320e-4155.81DNA gyrase subunit A n=6 Tax=Cyanobacteria TaxID=1... [more]
A0A7T1HNF7_9SYNE1.830e-4155.81DNA gyrase subunit A n=4 Tax=Synechococcaceae TaxI... [more]
A0A0K1RXJ8_9CHRO1.890e-4157.36DNA gyrase subunit A n=80 Tax=Chroococcales TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1360.40coord: 1..132
e-value: 1.4E-42
score: 147.1
NoneNo IPR availablePANTHERPTHR43493FAMILY NOT NAMEDcoord: 1..130
NoneNo IPR availablePANTHERPTHR43493:SF6coord: 1..130
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalPFAMPF00521DNA_topoisoIVcoord: 2..130
e-value: 1.8E-31
score: 109.5
IPR013760DNA topoisomerase, type IIA-like domain superfamilySUPERFAMILY56719Type II DNA topoisomerasecoord: 2..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22282contigH-paniculata_contig22282:2560..3697 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22282.5924.1mRNA_H-paniculata_contig22282.5924.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22282 2560..3697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22282.5924.1 ID=prot_H-paniculata_contig22282.5924.1|Name=mRNA_H-paniculata_contig22282.5924.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
LLLINGATGIAVGMATNIPPHNMAEIVDATVGLIRNPSLSDEALFRLVPA
PDFPTGGKVVTCCIMGLAGARKLYTTSNGGITIRATTHMEMTEGKGRPKR
NTIVITEVPYQVNKSVLLQRIADMVNDKKVIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002205Topo_IIA_A/C
IPR013760Topo_IIA-like_dom_sf