prot_H-paniculata_contig22252.5914.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22252.5914.1
Unique Nameprot_H-paniculata_contig22252.5914.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A2K3K827_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K827_TRIPR)

HSP 1 Score: 62.4 bits (150), Expect = 2.970e-11
Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 60
            +N+SK    H +TKHI +R H IR  + EG++ L+++ T +QLADI TK L  V+F++LR
Sbjct:   19 INISKNPIQHSRTKHIDIRHHFIRDLVEEGVVKLEHIATEEQLADIFTKALDAVQFEKLR 78          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A453LP72_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LP72_AEGTS)

HSP 1 Score: 66.2 bits (160), Expect = 3.800e-11
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 LSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 60
            L K S  H ++KHI VR+H IR+ + EG + +++V+TGDQLADILTK L RVKF  LR
Sbjct:  475 LCKNSVHHDRSKHIDVRYHFIRECVEEGRVTVEHVRTGDQLADILTKPLARVKFLELR 532          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: UPI001E1CA6F9 (LOW QUALITY PROTEIN: uncharacterized protein LOC109774810 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA6F9)

HSP 1 Score: 66.2 bits (160), Expect = 3.870e-11
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 60
            + L K    H +TKHI  R+H IR+ +++G +A+ Y+ TG+QLADI+TK L RVKFQ LR
Sbjct: 1362 IQLCKNPVFHDRTKHIETRFHFIRECVQDGRIAVDYIHTGEQLADIMTKALPRVKFQELR 1421          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A6A4QD86_LUPAL (Putative RNA-directed DNA polymerase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4QD86_LUPAL)

HSP 1 Score: 62.0 bits (149), Expect = 5.000e-11
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLRNLL 63
            + LSK S  H ++KHI V++H +R  + EGI+ LKY  T +Q+ADI+TK L++ +F RLR +L
Sbjct:   25 IQLSKHSVFHGKSKHIDVKFHFLRDLVNEGIVKLKYCNTQNQIADIMTKPLKKEQFIRLRGML 87          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A453SJJ3_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SJJ3_AEGTS)

HSP 1 Score: 64.7 bits (156), Expect = 1.110e-10
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 60
            + L K    H +TKHI  R+H IR+ +++G + + Y+ TG+QLADI+TK L RVKFQ LR
Sbjct:  261 IQLCKNPVFHDRTKHIETRFHFIRECVQDGRIVVDYIHTGEQLADIMTKALPRVKFQELR 320          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A409WC63_9AGAR (Uncharacterized protein n=2 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WC63_9AGAR)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-10
Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLRNLL 63
            + LS     H +TKHI V++H  R+ IR GI+ L+YVQT DQ+ADI TK L RVK ++ R +L
Sbjct: 1205 IQLSNNPVFHMRTKHIDVQFHYTRQVIRRGIVKLEYVQTEDQVADIFTKALGRVKLEKFRGML 1267          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A7TSQ0_VANPO (Tkp5 protein n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) TaxID=436907 RepID=A7TSQ0_VANPO)

HSP 1 Score: 64.3 bits (155), Expect = 1.750e-10
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLRNLLV 64
            +NLSK    H +TKHI +++H +R  + +G L L YV T DQLADI+TK   R KF+ LRN LV
Sbjct:  335 INLSKNPVYHPRTKHIDLKFHKMRHVVEQGTLTLDYVNTKDQLADIMTKVFPRDKFESLRNELV 398          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A1X1QSA8_9GAMM (Uncharacterized protein n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. M TaxID=1840537 RepID=A0A1X1QSA8_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 2.680e-10
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLRNL 62
            M+L+K    H + KHI +R H +R  + +G + L Y +T D +ADILTKGL  V F+RLR +
Sbjct:   34 MSLAKNPQFHGRAKHIDIRHHFVRDKVSDGTIELNYCRTDDMVADILTKGLCNVSFERLRKM 95          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A4Y9YHS6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YHS6_9AGAM)

HSP 1 Score: 63.5 bits (153), Expect = 3.450e-10
Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQ 57
            M +++    H +TKHI VR H +R+ + EGIL L+YV TG+Q+AD+LTKGL R K +
Sbjct: 1360 MAIARNPAFHARTKHIDVRHHFLREKVEEGILDLEYVPTGEQVADVLTKGLPREKHE 1416          
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Match: A0A7H4LHQ9_WHEAT (Genome assembly, chromosome: II n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A7H4LHQ9_WHEAT)

HSP 1 Score: 63.2 bits (152), Expect = 4.150e-10
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKGLRRVKFQRLR 60
            ++L K    H ++KHI +R+H IR+ + EG + + YV T DQLADILTK L R+KFQ +R
Sbjct:  276 ISLCKNPVHHNRSKHIDIRYHYIRECVEEGKVEVDYVSTKDQLADILTKSLGRLKFQEMR 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22252.5914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K3K827_TRIPR2.970e-1146.67Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium p... [more]
A0A453LP72_AEGTS3.800e-1156.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001E1CA6F93.870e-1151.67LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A6A4QD86_LUPAL5.000e-1147.62Putative RNA-directed DNA polymerase n=1 Tax=Lupin... [more]
A0A453SJJ3_AEGTS1.110e-1050.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A409WC63_9AGAR1.350e-1050.79Uncharacterized protein n=2 Tax=Panaeolus cyanesce... [more]
A7TSQ0_VANPO1.750e-1051.56Tkp5 protein n=1 Tax=Vanderwaltozyma polyspora (st... [more]
A0A1X1QSA8_9GAMM2.680e-1045.16Uncharacterized protein n=1 Tax=Cycloclasticus sp.... [more]
A0A4Y9YHS6_9AGAM3.450e-1050.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A7H4LHQ9_WHEAT4.150e-1050.00Genome assembly, chromosome: II n=1 Tax=Triticum a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22252contigH-paniculata_contig22252:3208..3402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22252.5914.1mRNA_H-paniculata_contig22252.5914.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22252 2947..3402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22252.5914.1 ID=prot_H-paniculata_contig22252.5914.1|Name=mRNA_H-paniculata_contig22252.5914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
MNLSKGSGAHCQTKHIGVRWHGIRKWIREGILALKYVQTGDQLADILTKG
LRRVKFQRLRNLLV*
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