mRNA_H-paniculata_contig2223.5907.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2223.5907.1
Unique Name	mRNA_H-paniculata_contig2223.5907.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: D7FMX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMX5_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 6.180e-60
Identity = 138/235 (58.72%), Postives = 157/235 (66.81%), Query Frame = 3

Query:  132 MKFLTRRESERDTYE-------GRPP--TSSKRSAMDSNGMPAQAGXXXXXXRNMKPDSPPS-----------ITMQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGDSACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANVNPRDRNDKMSDRSKSRGNPPRHSHNRQRSQARMSADQTASSSRPSHGLTATLNPDS 776
            MKF  RRESER  ++       GRPP   SSKR +      P              P S  S           IT QTPDNVIGETLVVQGRVEF+NLLRIDGHFEGEL+GNGSLIIGPTAEVISNL+GL+EVYVEGILIGD +C KMQIRFAGCVTGN+ CASLGMDPSVVLKGSAN+NPR++ +K     KS+   PRH     RSQ R + D   +SSR S   T+ L+P+S
Sbjct:    2 MKFR-RRESERGDFQQAGQQDVGRPPQPASSKRVSDAFQASPEPTPVAVPIPATSAPQSTASTPGNKSSDTTTITTQTPDNVIGETLVVQGRVEFQNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCNKMQIRFAGCVTGNLICASLGMDPSVVLKGSANINPREKVEKT----KSKSAAPRHKQG-SRSQTRSAED---TSSRAS---TSVLSPES 224

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: F0Y5F7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5F7_AURAN)

HSP 1 Score: 103 bits (256), Expect = 1.650e-19
Identity = 47/114 (41.23%), Postives = 78/114 (68.42%), Query Frame = 3

Query:  273 PDSPPSITMQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGDSACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANVNP 614
            P+   S+    P+ VIGETL ++G++ F+ LLR+DG FEGEL+  G LI+GP  E++ ++K + ++ V G +IG+ A +++++  +  + G+I C  L MDP+VVL G+ N+NP
Sbjct:  348 PEPKKSLLEMEPETVIGETLSIEGKLRFERLLRLDGKFEGELISEGDLIVGPQGELVGDVKTMSDIVVFGKVIGNIAVDRVELCGSASIYGDITCKVLLMDPTVVLVGNLNINP 461

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: A0A212KW08_9CHLA (Uncharacterized protein n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KW08_9CHLA)

HSP 1 Score: 82.0 bits (201), Expect = 5.850e-14
Identity = 42/104 (40.38%), Postives = 68/104 (65.38%), Query Frame = 3

Query:  288 SITMQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGD-SACEKMQIRFAGCVTGNIQCASLGMDPSVVLKG 596
            +++ + PD  +GE +V +G + FK LLRIDG FEG+LV +G LI+GPT  V SN++ +HE  +EG + G+ +  E++++R    V G+I+   L +D  V + G
Sbjct:  115 TLSAEEPDTTLGEGVVFKGELTFKRLLRIDGQFEGDLVSDGKLIVGPTGIVKSNVR-MHEAIIEGRVEGNITVQERLELRCNAQVIGDIKAKQLSVDEGVSIVG 217

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: A0A7Y3IS56_9BACT (Polymer-forming cytoskeletal protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7Y3IS56_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 1.010e-13
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 3

Query:  300 QTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGD-SACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANVNP 614
            Q P+ VIGE + ++G + F  LLRIDG+FEG LV  G LI+GP   V +N+  L E Y+ G + GD +  E++ +R    V GNI    L +D  V + G  NV P
Sbjct:   46 QDPETVIGEQVTIKGELCFTTLLRIDGNFEGTLVSQGKLIVGPNGSVKANID-LEEAYISGKVEGDITVKERLHLRGRAEVHGNITAKLLSVDEGVSIFGHVNVPP 150

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: A0A6M1ZQA3_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZQA3_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 1.790e-13
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 3

Query:  300 QTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGDSAC-EKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANVNPRD 620
            + P+  +GE +   G ++F  LLRIDG FEGEL+  G +I+GP  +V +NL  L    ++G + G+  C E++++R    VTG+IQ   L +D  V + G+  V PR+
Sbjct:   64 EEPETTLGEGVTFNGELKFDRLLRIDGTFEGELISEGKVIVGPKGKVKANLN-LKAAIIQGEVEGNITCKERVELRDEAVVTGDIQAKLLSVDEGVTIVGNVLVTPRE 170

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: E1QGE6_DESB2 (Uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / LMG 7858 / VKM B-1802 / 2st14) TaxID=644282 RepID=E1QGE6_DESB2)

HSP 1 Score: 68.9 bits (167), Expect = 2.010e-10
Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 3

Query:  315 VIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGD-SACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANV 608
            ++G    ++G++ FK   R+DG F+GE+VG G+LI+GP A V + +     V + G+++GD  A E++++R  G + GNI    + MD  VV +G+  +
Sbjct:   15 LLGGASNIEGKLNFKGQARLDGVFKGEIVGEGTLIVGPGANVEARILAT-AVEISGVVVGDIEATERIELRAPGKLVGNIVAPLVVMDEGVVFEGNCRM 112

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: A0A521SZ95_9CHLR (Polymer-forming cytoskeletal protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A521SZ95_9CHLR)

HSP 1 Score: 68.2 bits (165), Expect = 5.130e-10
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 3

Query:  270 KPDSPPSITMQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGDSACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANVNPR 617
            +P +P +   +   +V+G+ +VV G++  +  +RI+G FEGE+  NG L++G T  V         V V G L GD   EK++IR  G V GN+   +   +    L+G   +  R
Sbjct:    9 QPQTPATAPAERITSVLGDGVVVHGKITGRGGVRIEGAFEGEIALNGMLVVGTTGRVTCPHLQAQTVIVAGALRGDITAEKVEIRSTGRVWGNVVTVAFSTEEGAYLRGQIQMEDR 124

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: D7G3H0_ECTSI (Globin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H0_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.000e-9
Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = 3

Query:  270 KPDSPPSITMQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVG--NGSLIIGPTAEVISNLKGLHEVYVEGILIGDSACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANVNP 614
            KP  P  +    PD+VIG   ++QGR++FK LLR++G FEG L      ++++  +  +  +++G H V VEG +IG+ +   + +R    V GN+ C  L    + V +  A  +P
Sbjct:   23 KPFMPRLVRSNKPDHVIGPGAMLQGRLQFKGLLRVEGRFEGVLKAAEGANMMVARSGVIAGDVEGCHSVIVEGTIIGNVSASVVVLRRYANVQGNVWCKDLAAAATAVFRNRATESP 139

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: A0A848ZG50_9DELT (Polymer-forming cytoskeletal protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZG50_9DELT)

HSP 1 Score: 66.6 bits (161), Expect = 1.500e-9
Identity = 35/108 (32.41%), Postives = 68/108 (62.96%), Query Frame = 3

Query:  297 MQTPDNV---IGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGDSACE-KMQIRFAGCVTGNIQCASLGMDPSVVLKGSANV 608
            M+T +N+   IG+    +G+++F   +RIDGHF GE++G G+LI+G  A + +++  + +++  G + GD A + K++IR  G + GNIQ  S+ ++    ++G+  +
Sbjct:    1 MKTIENITTYIGKDTEFEGKLKFYGTIRIDGHFRGEIMGEGTLIVGEGAIIEADIH-VSQIFNSGRIQGDVAADHKIEIRAPGKILGNIQAPSIVINEGATIEGNCRM 107

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BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Match: A0A661T7D0_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661T7D0_9DELT)

HSP 1 Score: 64.3 bits (155), Expect = 7.000e-9
Identity = 35/98 (35.71%), Postives = 60/98 (61.22%), Query Frame = 3

Query:  318 IGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPTAEVISNLKGLHEVYVEGILIGD-SACEKMQIRFAGCVTGNIQCASLGMDPSVVLKGSANV 608
            +G+    +G++ F   +RIDG F+GE++  G+LI+G TA V + ++  H V V G + GD +A ++++I   G V GNIQ   + +D  VV +G+  +
Sbjct:   12 LGKETEFEGKLSFAGAVRIDGRFKGEILTEGTLIVGETARVEAEIRAGH-VIVSGRVRGDLAATDRIEIHAPGEVFGNIQAPIVTIDEGVVFEGTCRM 108

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2223.5907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMX5_ECTSI	6.180e-60	58.72	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
F0Y5F7_AURAN	1.650e-19	41.23	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A212KW08_9CHLA	5.850e-14	40.38	Uncharacterized protein n=1 Tax=Chlamydiales bacte...	[more]
A0A7Y3IS56_9BACT	1.010e-13	42.45	Polymer-forming cytoskeletal protein n=1 Tax=Chlam...	[more]
A0A6M1ZQA3_9BACT	1.790e-13	37.96	Uncharacterized protein n=1 Tax=Chlamydiae bacteri...	[more]
E1QGE6_DESB2	2.010e-10	35.35	Uncharacterized protein n=1 Tax=Desulfarculus baar...	[more]
A0A521SZ95_9CHLR	5.130e-10	31.90	Polymer-forming cytoskeletal protein n=1 Tax=Anaer...	[more]
D7G3H0_ECTSI	1.000e-9	32.48	Globin, putative n=1 Tax=Ectocarpus siliculosus Ta...	[more]
A0A848ZG50_9DELT	1.500e-9	32.41	Polymer-forming cytoskeletal protein n=1 Tax=Desul...	[more]
A0A661T7D0_9DELT	7.000e-9	35.71	Uncharacterized protein n=1 Tax=Deltaproteobacteri...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2223	contig	H-paniculata_contig2223:4756..15456 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	219.2
Seed ortholog evalue	2.9e-54
Seed eggNOG ortholog	2880.D7FMX5
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Polymer-forming cytoskeletal
EggNOG OGs	2RXV0@2759,COG1664@1
COG Functional cat.	M
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	8
Model size	1620
Cds size	984
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2223.5907.1	prot_H-paniculata_contig2223.5907.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2223 5261..15325 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929614.8766909-UTR-H-paniculata_contig2223:4755..5260	1622929614.8766909-UTR-H-paniculata_contig2223:4755..5260	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2223 4756..5260 -
1691480936.2937188-UTR-H-paniculata_contig2223:4755..5260	1691480936.2937188-UTR-H-paniculata_contig2223:4755..5260	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2223 4756..5260 -
1622929615.023276-UTR-H-paniculata_contig2223:15325..15456	1622929615.023276-UTR-H-paniculata_contig2223:15325..15456	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2223 15326..15456 -
1691480936.3893983-UTR-H-paniculata_contig2223:15325..15456	1691480936.3893983-UTR-H-paniculata_contig2223:15325..15456	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2223 15326..15456 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2223:4756..15456-
coding sequence from alignment at H-paniculata_contig2223:4756..15456-

protein sequence of mRNA_H-paniculata_contig2223.5907.1

>prot_H-paniculata_contig2223.5907.1 ID=prot_H-paniculata_contig2223.5907.1|Name=mRNA_H-paniculata_contig2223.5907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=328bp
MKFLTRRESERDTYEGRPPTSSKRSAMDSNGMPAQAGPAQASPRNMKPDS
PPSITMQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELVGNGSLIIGPT
AEVISNLKGLHEVYVEGILIGDSACEKMQIRFAGCVTGNIQCASLGMDPS
VVLKGSANVNPRDRNDKMSDRSKSRGNPPRHSHNRQRSQARMSADQTASS
SRPSHGLTATLNPDSDDESISVLADDPKLTVSFDDGKLGRSYKSKSGRSR
TNGSGSTSSTSATSATDLESHSRVSSTESSGSSTAPAISGDGEKGTVPRL
GDSITIPVRTRQSMHQIPASIPMSGAT*

mRNA from alignment at H-paniculata_contig2223:4756..15456-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2223.5907.1 ID=mRNA_H-paniculata_contig2223.5907.1|Name=mRNA_H-paniculata_contig2223.5907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10701bp|location=Sequence derived from alignment at H-paniculata_contig2223:4756..15456- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGAAATAAACGGTCCTCTTTGGTCTAGAGGGAATAATAAGAGCGCCTGC
AGAGACACTCTGTGCGCGCAGAACTGTCAGGACGCGATTTATCGATTCAG
CTCCCCGAGACGATCCTCTGGTGATAGTGGTATGAAGTTTCTCACCAGGT
ATGTGGGTTGGGTGGCTGTCATAACCACGTCTCCACCGTGAAACCCAACG
AATAAAGGCGACAGCAGAGAGCCGAATTTTGGTGAAAAGATACCATATAC
AACTGCAATCGTTGGTCTGAGTGTGGGTGCCAGTGTAAGTATCTAGTATG
TGAGTGAAAGCGTCCCGCACGATCTACCTAAGCTCAACAGATGTGATTTC
ATCCGCAGGCTCTACGTGATGTTTCGTAGCCATTGGTGAGCTTTTCGTTG
TTTGCTTGCGAGAGCGTCTCTTCTCTTCTCAGTCGTGTTAGAGTTCGGTG
GTGTGTGAGGATGTGGGGTTGGCCTTCTAGCGTGTAACACATGCACACAT
CTTGAAGATGTGAATCAACATATAGTAAACGCGGCATGCAGCTTATGCGG
TTTCTCAGTGGTTATACGATCAAGAACAGATTTGGGTTCACCGTTATATC
AGCTTTGAGCACAACATATTTGTAGACCATGTGCACGCCGACCGCCTCGA
ACATTTCTTGTACCTCAGGAGGGAATCAGAGCGTGATACGTACGAAGGGA
GACCTCCGACATCTTCGAAGCGTTCGGCGATGGATTCAAATGGCATGCCG
GCGGTAAGAAAATAATCAGATTCAAATATTTCACGCTTCCCGTCTTGATT
TTACGGACCCCTGAAACGTGATGAACAACAATAACAGTTCTGATGCTCAG
CTGCGGGTGGAAGCATCACAAAAGAGACACCAGCACACGAAGCTTGGTTG
TCTCATGATGATATAGGTTGTGGGTGATTTGATTTTCATGGATGTCTTTT
AACTTTCTCCTCCGCCCGTTGTCAGGAGACTCCTGCTGCCGCAATGTGCC
TGTTTCGTTGAACGAATAATTTTCCAATATGTGATTTCCTGCTCTCTGCT
CACACTTGGACTGCTGTTTGTTGTCCTTGCCTTGTAACTTGCTATAGCAA
GCAGGGCCTGCGCAGGCCTCTCCTCGCAACATGAAGCCGGACAGCCCCCC
GAGCATCACAATGCAAACTCCGGATAACGTGATTGGCGAGACTCTGGTGG
TGCAAGGACGGGTAGAGTTCAAGAACCTCCTGCGCATCGATGGGCATTTC
GAGGTGATGGCTGATGAGAATATCGAACATATAGACCCAGACAGGACAAG
AAAAAGCGAGTATGGTACATTTTATATACAAAACGAGATCTAGTGATGTT
TTCGGATCTGGTGGAGCAAGAACAGAGAGTCCAATTCTAAAGTTTCGAGT
TTCTACTACAGTTAATAATAATACTTCCTTGTTGGTTTTGACTGGTGGGT
AACGGAACATGCGACGCTTACGAAAAAGAAATTGCACTACTTTAGACAGG
CACAATCTAAACGACAACGGTTTTCTGGTAGGCTACACGGTGGTGTTTTG
GCCTAGTTTCTGTGCTCAAGAACTCTTCCGTAAATTGGAAAGTAGAGGTC
AACTTTGTCACAATTGTGTAGGCAGGATTGCCACGTATTATTTTTTTCAC
TCCGCTGTCTCTTGAATATTTTTTGTCGGCACAACATGGTAGCTCTTTAC
TATTTTCCTTTGTTTCTCCCATTTACGATGTCTGCCTGTCATGTGCCCCA
AGGGAGAGCTTGTAGGCAACGGAAGCCTGATCATCGGCCCCACTGCAGAG
GTGATCAGCAACCTCAAAGGACTGCATGAGGTATGTAGATGCTGTTTGTT
CGAGTGGGCTTTTTGCCCTCGTTCTACAATATACGAGGTCCATACGTCAG
AGGCGTCACAAGTCTTGTGAGGAGAAGTGACAGACTCTGGACAAGTGGTG
GACATGTACACGCAACGTTAAAAAAAATGCTGCATCCAGCAACTGCTGTC
GGCAGCAGTAACTGTACTGTACCGTTGTGAATATTTCGCTAGTTGTGCCG
GGGGTACAGCAGTCTCCCCATTGTGGGTACGTTTGCATGTGCCCTGACAC
CGTGACCCAAGGCACTAGAGTCACTGGCAGCTCCGTCCTTTATGTATAAT
TTTCAGTTGTTGGGGTATTGGGATGTTGAGGCGAGCTTCAAGAGGTCAAC
GAACTTTCGTAGTGGATTGAACACTGATCGAAAACTTCTAATGGTTGCTA
GCCCCGACCAATAGATTGGAAATTTAGTACTCTCTTTTCAAATTATGACA
TCATTATATAGATGGGTGGTAGAGGTGTCTCGAATCGACGTACATGCTAC
TGACTGTACCTGGTACTGTTGTGCTGTGTATCCGTTCATTTATTTGAACG
GACGTGCAGGGGTCTATCGGTCCATCATGATATATACGTCAGTTCAGCGG
TACACAGGACAGCAGTCGGTCGCACCCCTTATCTCTTACAAAGTTATGAC
TCCTAAATGATGTCTTCTTTACTCAGGCAATAATACTTTCACAGGAGTGC
ATTCCGAGGTTTAATTGACAAAATAATGTCTTTGCAAATATTATATGCAG
GTATACGTCGAAGGCATTTTGATTGGAGATAGCGCCTGCGAGAAAATGCA
AATCCGATTTGCTGGGTGTGTGACGGGCAACATTCAGTGCGCATCACTCG
GGATGGACCCGTCCGTTGTTCTCAAGGTTAGTAGAAAATGAAGTGATACT
TGAGGGTTCGGATCACTCGCCAGAAAATCTATTTTGGAGTTTGGCAAATG
ACTGAAGCGTTCAGACACGGTTGGATTTCCCGTTTCCCCCATCACAAACA
TCACCCGAGTTATATTTACTATTTATAATCACCCTTGCCGTAAGGTTATT
GTACAGCCCTTCGAGCTTGAACAGGGTATCGTTTTCAAAATACTTTTGTT
TCGACGTACAGTCGATGCTCTCCGTCAAGACGCTTCATGAAGATCCTGTG
TCCTGATTGTGGAATTGGCCAACTTTTTACGGCTTTTGCCTTGAAGTAGA
CCCAAGTCTGTAAGCGATCTGTAGGAAGTGGGCACACGGCTAAGAGTAAC
ATGGCCGTAGATAGCATGTGTTGTATTCCAGTTGTTGGTCGCTGCCCAAA
GCACAAGGGCCGCCGAAGCTGGTATCATACAGTTGTGCTGTTCATGAATA
TTACATCTGCCTGCTTCGGTAAGGTCACACACTACTGCAGTTATAGCACC
TAATCAAGCACCACTTAACCCGATATAGAAATACAGAGATACCAGTAGGC
GTAAATAGTTGCGAATATCACCTGGAAGAATATGAATACATCGAGCATTC
GAAACTTATGTTTGAAAATGTATTTTTCAAATCTTTTGGCGCCAAAAGCC
AAAACCACTTTTTATGGATCAAACTTCCAAAAAAAATCGAACGAGCCCTA
GATCGAGTCCCAACCTGTCCAATTTTTCCAAGAGTCGAACGCACATTTCG
GAACCGGTATATATTTTCGAGTCGCGGAGTATGGCGGATACCCAAACGTG
CATGCAGTCTCCCAATTGCTCAGCAATACATCAGCAGCAGTCAGTATAGA
GGGTGCAGCAGACATCAGCAGCTACCGTAGGCCCTTCATGGCTTGCAGAT
TGTGACCCTTATCGCGGAAGTAGTACGTGCCACCACGTTCCATGACCCAT
GCCACAAGAGAGCTGTGTTCGATAGGTAGCTCATCACTAGTCACTTTCTA
TGTGCTGTGTTGTCGCCATAAATTGTAGCCCTTACCCGACACTGGACTTG
TACAACTAGACCCCAACTTCTAAATAGGGACTGGTGGCGCCAAGATATGT
ATGGACCGTGGTTGTGCGTGTTGGAGGTATGGTGGAACATAGTGTGTGTT
CATATGGCCTGATGCTTTTTTCTTTTTCAATTTTCAAATGGTGCCACAAG
AAATGGGTAAAAAAATAAACGATGTAAGTTTCTCAGAGTTGGATTTTTTT
AAAAGTCAATTTTCAAACGCAAATTTCGAAAACCCCTAGGAATCGGCCTA
AGCACGTCTACTCTATGTACTCCGCATCATGTGCGAATCTTTCAAGTAAT
AATGAAACCTGTGAACAGGGGTCATCAAATATTTATTCTATGTCGTCCCG
CACATGCTGACGCTCAGGCGGCTGCGTTTTTAAATACGTTCACTAACTCA
GCATAATAGTGTGCCCATGAAGACATCAGAACGTTCTGGTCCGGGTAGTC
CAGAATTGTGCTCCAACACGGTTTTGCTCAAATCGGCGCCGTTGAGCTCT
GCCAACGCACATTGTAAGTGTGGCGGTCAAGTTTACCGATAGTTTCAGCG
TTGGGCTTGCTTGCGTCGGGGCATTGCAAAGCGTGAACCATGAAACGAAA
GTACTGTCATTGGTCAAGTGGTAAATAGGGGGGTCCCCACACATCCGACG
GTACAGCTCGTGATCCATTTGATGCGCATCATTGGACGTGTACGAAACAG
TCGGGAACTTAATGTGTGTCGATGATGCATAGCGGACCCACTGCCCATGG
ACAAACATGCACGCATTCAGTTGTTCCCATCTGATCCATCCATGCCCTAT
AATGATGTATACATGTTTGTCCATTGCTGGTGCGTACGCTATTCATCACC
AGCACATAGTTTGTTTTCAACTGATCCGTACACGCCCTATTATCCATGTA
TACATGTTTGTCCATTGCTGATGCGTACGCTATGCATCATCAGTACACAT
TTTGTCCCAGCTAATCTGTGTACGCCATATGGTGCGTATATGTTTGTCCA
TTGTTGATGTGTACGCTATGCATCATTAGCACACATTTTGTTTCCAACTG
ATCCGTAAACGTCCTATGATATATACGTGTTTGTTCACGGGTGATGCGTA
GCCTACGCACCATGAGTACTTGATTTATGGATCATGACCAGTCGTCTGTG
TGGAATATTGATGTTTCTGCTGCGGATAGAATTTCAAGGGACGAAAAGAA
ACTTGCCCTTGTAGATTTATCTGGTGTCAGGGCGTGCCTTAAACTCCAAA
ACTCTGAAGCGAAAACATAAACAGGGCTATCTATGACAGGTCCGCCGGAG
TGAAACGTAACGAAGGTTATTTTCTCTTCGAGGATCTTCATGGAAATTAT
CGGTTCCTGAAACACAAAACGTTTGTTCAAAATGGCAACAAGGTGGCGCA
AAAAATGGCAGAAAATCAATGAGTGCTCTCTTTATTTCTGTACCATATCT
GTTCATGGGTGTAACACAAGTGCGTCGTGCAACGAGTGTCTGCACTTTCA
CCTCGTACAGCACCACACACAGACACGCCCAGTAGATGCCCAACACCTCC
ATGGATAGTCACGGTCCACTAGGGCATAGGATATACTTTCACTGAATATG
ATCAGTTCAGTATTGGTAGATCAACAATGATTGCCGTGAAAAATTGAGCA
CATATTTTCCAGAAACTGTACAGGTGGTCACCATTTTTGTGGTCTGTTAT
AGTCACACACACACACACACACACACTCGTCTCCTTCAGCTTTCTATAGA
CTCAACCCAAACCAAACAACACATCGTACGTTTTCAAATACGAGTTACCT
CTCGGGCTATCCAGCATTTCTTTTATGTGATGTAATTTTTGTGATCAACG
TTTAAACCAGTTGGGCTTTGGTGTGCTGTTCTCATTCATTCTTACCGCAT
TTTCTCTCCGACCCTCTGGGCCCATAACAGGAAACGAAATTATTTCATTT
TCGTTTTCATTTTCGTTTCGTTTTTGAGTTCGTTAAGTTCGTAATCCCTC
ACACACACACAAACCAAAAAAAGAAAAAAAGCCTTCATCGCCATAATATG
CAATCGTTCAACCACTAATTAGACTAGGGGCTCAGCAACAATACAAACAA
CCTAGACGCAGAACTGCAAAGTGACTGCAAAAATCCCCACCCATCGAGGA
AGCGATAGCAAAATTCTCCCAGAAACCGAGTGGATACTAGTATACTTGGG
GGACCTTGGACACCGCGAAGATTCTGCAGTACGTAAAAATTACAGTCTCC
CCGGCATTTATGAGAGATGTAGTACGTGACCGAGGGGAAAAATTGGAAGT
TTGCAATTCTCGCCTGCTGCGCAAAGCATGGTATCCAGTAACTGTGTTGT
ATGCACCAAACAGTAGTCGTTAGGTCATGATCAAGATACAAATATTTCGA
ATGGGCCCCCTTTTGAGGTCACCCTCTATGAAGTGGGCACCAGGTCGTGT
AGGCCAGACTAGACCGCCGTAAAGGGGGCCAGCGAGTACATGTGATAGGC
TGGTTGCTGGAACTGCAACACCGTGGACTACAGTGCACACGTCGATTCGG
TCGAGCGGTGGCAGCCAGCTTGACATGTGTTCAAGAGTTGGCTATACATA
AAGAAGGAAGAAGCAGTGAGTAAAACAGTATGTGGTACTGCCGTTGCGGC
AAAATAAGGAAGAGAGAGCGAGAGACGTTGGCAGGTATCAGGATTACCCG
AGGAATCCGTAGCGGTTGGTACTGTGCATATGTGTGGCGTGCTGTCGTGC
GTGACAGGTAGCTTATCACGATTAAAAACACTATTTTGACGGTTTAATTT
GGATCATGTAGCATTTGAGAAAATTCGTGCTATCGTCGCAGATCGGGCGC
TGCGCTTTCTGCAACAAGTTATTCTGACAGTATTTATTCAGGCAATGCAC
AAAAAAAGGATACACCTTGGCCCTTTTCGGCCATTCCAAGGTGCCGGAAC
ACACACACACGCTCCCTCCCCTATGTGCCTCGTCATCGCGTTAAAAAAGC
TTTCAAATGTTTTGAAACCCCAACAGTCCAAACCACCCATTATATGCAGA
GGATTTCAACACTTTTTCGAGCTGTCACGACGAAATTTTTTATCTTTTTA
TTGCGGAAATGCGAGTAGTCTCAAAATAGCATTATACGTTGCACATTTTA
CGGTAGAAGCACCCATTACGACATGCGTGACTACAGCGCGATTACCACTG
CTTTCTGTGAGGATCGGATGGTGGGATCATTTAAGGGATTAAATATACAT
GAATGATCTCGAGCAGTAGTGCTTAAACCAATGTACAAGGGGGTCGTTCG
CAGTGACTTTGCCCGATGCCTTCAATTCGCCGGAAAGTCCGAAGGTAATC
CTTTCGGCCATTGATTTGCATACATATTTTTGCAAATGCAAATATTCAGT
ACGTCTACGTAGATTCTGTTCGCGGTCAGAAGGTTAACTGGTACGTTCTG
CGCACGCAAAAGGTGCCCCACTGTCGAGATCAATGCGCAGCAGTGACCTA
CCCTTGGTCTCAAGAGCGAAGGGGAGAATTGAATAGGTTACAGGTGCAAG
GATTTCCACGGTCATTACACATAGGCTTTCCCGGTGGACAGGTCCTGCCG
AAAACACCGCCCAAGCAATGCCTGTTTTTCGGTCCATCATGCTGACAGAT
GGCAAGCGCTGCCTTTCCTCCGTGTTTCTCTGGTGGAATCCCCCTCAAAA
CCGGGAGACATTTGTAGTAACTAACGCTAGTGATTGGTGAGAATATGTCG
AGGGTGTTCTCATTTCCTATCGCGTCACGTGTTCCACGATATCTTGAGCC
CCGAAAAGACTTCGATGATACTCTCAAGTGCCCTGCGAAGCCCAGCATTT
TGGATACCACTTCGTCGAAACTACGGGCATTTTGTTGTAGGACCCCAAAT
TGAATCCATATTCGTCTGATATTGTGTGTACACGGCCACTGGTGATGGCA
GTGATTTATCTGTGCAATGTAACGCTGCCTCTGGAAGCGTTGGTTCCGAT
CAAAGAAAGAAAATTACTTAATCCAAGTTTGGAGTACGACCCACGTTTTG
TCTTTGGGTTCCTCGCCGTGTTGCAGTCAAAGAGGAGGATTTTACAGAGT
TGCAATATTCGTGCTAAGTGACACAACGTTTTGCAATTATTCTTGTGATT
TCGTTCTGGAAGGATTTGTGCAAAATCTTGTGCATGTATTTTTGCTGCGT
CCCGTTATTTGATTTGTGTTGTCGACTTGTACATGTTACCCCTTCCGTGT
CGCCAGGGAAGCGCCAACGTTAATCCGCGCGACAGGAATGATAAGATGTC
GGACAGAAGCAAGTCTCGAGGGAATCCACCTCGTCACAGTCATAACAGAC
AACGTTCTCAGGTGATCAAGATGTGTTTCGATAATGGGTGTATGCAGTGT
AATGTACTGCAGCAATGACTTTCGGGATGCGTCCACGGTGAAATAATCAA
CCCCCGTCAGCAATCTTGGAAATAGTTGCGAATATATTCGTCAGCAGAGT
TTGCCCTAGAGAGCACGCATGGTGACCTAAGAATTCATCCGATTGACTGT
TGTGTGAAGTAACCTATGGGAAAGAACGATTACTATTTTCCCAAGAATAC
ATATGTATATCCGGCGTCGGAGTAATGGTGCAATGATGTACGAGTCAGAC
ATTTAATTCAATATATCCCACGACGGCGTGCGATTGTCGACACATTACCT
GGCCAAGAGTATGAGTGAGGATAGACTTATCCTATGGTAGAGGGGGGGGT
TATTTGAGCTGCTTTTTTTAACGAAGGGGCCGCTTTCAGAAGGGGCTCGG
GCATTTTTTTCTTTTGCATTTATTGCCTTCTCTTGAACAAAAATCCTATT
TTAGCTCCTGGACTGTGCACCTTTGGAGATCCCGCAGAGGAACAAATAAC
TCTGTTCTGTAAAAGGAAATCCAGACGTACTTCGGTATGGAAGCATCGGA
TAGAGGTTTTTGCCTTAGCTTTTCGGGGGTTAAACAACTAAATAAAATGG
AGATGCACAAACATATGCATTTGACAGGGGAGTCATCCTACGGTAGGGAG
GAGGGGGTATTTGAGCCGCTTTTGTTTAACAAAGGAATCGCTTTCAGAAG
GGGCTTGGGCATTTATTTATTTTTGTCCGTCCTTGAACACGAATTCCTCA
ACTCGTGGACTGTTGATCTTTAGAGTTGCACAAACACACGCAATTGACAT
GGTTTTGATTGGCGTTATTTTTGCACCGCTTTCTCGCGAAGTGGCCTTCG
TTAAACAATTGACCCTCCCCCTACCGTAGAACGACTCGATACTCCATCTA
CTCATCGCTGGTATCACTCTCACCCTCCTCGCGCGTACGTTCACGCTTGT
TTTGTGGTGAAAGGCTCGCATGAGCGCGGACCAGACCGCGTCTTCCTCCA
GGCCATCGCATGGATTGACCGCGACCCTCAATCCAGATTCGGATGACGAA
AGTATCAGGTAGTGCTACTCTTATATCTAGTATATTTTGTTGCGAGTGGC
TGGCTTCCTGTGCCAGATATAAAGTTGGACGTTTTTAGCAGATCATATCT
CCAGATGTATAACTTTTCAGGGTGATCATTGAAATCGTTGGAAGGCTGAA
ATCTGATAGACTCATATACGCCATTTCACAGTTGATTTCGATTTGTTTAT
CAGGACTAACGGCCCTCAAGGTTGGCCTAATTTCGACCATTTTTATTTTT
TTCGATTTTTCACGCTTTTTCATCTAAAAAATATGAACGGGGGCAACTTT
TGTCCTTGATTCGGCCGGCTTCTTTTTGTATCTTGCACCCGATGGGCTCT
GCCAATTTCCGTGAACTTTTGGGGATCAACCCCGAAAACATCTTTACAGG
ATTCTAACTAAATAAAAGAAATAAAATCGTAGATATTTCAAGTGCTCCTG
CAAAAAGATTGACTTTATTTATGGCACAGAGGAAGTAGCAAGTTACAACT
GCATTTGATTTTAAGCTGCAGGCAAGTTTTTTTAGCTGTGTCGCCGAAAA
CCTCAAAAACATCATGGAGCCCAACAATTAATGCTCTTTATGATGCTGTC
GTGCACCCCTCTAATCGGTCGCAGTGTGCTAGCCGACGACCCGAAGTTGA
CTGTGTCCTTCGATGACGGGAAGCTGGGCAGGTCTTACAAATCGAAATCG
GGCAGGAGCAGAACGAACGGTAGTGGAAGTACATCCAGCACGTCTGCAAC
ATCTGCAACAGATTTGGAGAGTCACAGTCGAGTGTCCTCTACCGAATCGT
CCGGCTCTTCGACTGCCCCGGCGATTTCTGGAGATGGCGAAAAGGGGACG
GTGCCGAGGCTAGGGGACTCGATAACTATACCTGTTCGCACTCGGCAGTC
AATGCACCAAATTCCGGCAAGTATTCCGATGAGTGGCGCTACGTGACTGG
ATGATTGACGGCCCGCGGTCAGGATTTGTGTGGAAATATGTTGAGGGTAT
TCTGCTTTTTGCTGCTGGAGACGGTCAGCCGGGCTCGCGTCCACCCACTC
CGCTTGATTTCCGTACTGGGTCATATAGGGTCGGGTTGAGGGTGAAATGT
GATAATGTGCAGAGATCGGTTGGTTAGTAAGCTGTCCCGTTGTAGCGTAG
AGAGTCGTCCTGTTTGTGGGTGTAGGGCATAGGATGTATATGTAAGTCTA
CTGTAGCGTTGTGTGCGTTGTTTCCACTGAGCGTCTCATCTGACTGACAC
ACATGCTCAGCGTGGCCATCAACGCTTATAGGTTGTATGAAGATATTTTT
GTTTTTGAGGCGTATTTCAGACGTCAGACGTTGCGAAGATTACCTACCAG
CCAGGAGGGATTTTGCATTTTTTTGTTTTTGTTTTGTTTTCTGTTGTTCC
CGTCGAGAGTAGTTCAACAGTATATTTGCTAGGGATACAGTTTTTCTGGG
G

Coding sequence (CDS) from alignment at H-paniculata_contig2223:4756..15456-

>mRNA_H-paniculata_contig2223.5907.1 ID=mRNA_H-paniculata_contig2223.5907.1|Name=mRNA_H-paniculata_contig2223.5907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1968bp|location=Sequence derived from alignment at H-paniculata_contig2223:4756..15456- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTTCTCACCAGATGAAGTTTCTCACCAGGAGGGAATCAGAGCGT
GATACGTACGAAGGGAGACCTCCGACATCTTCGAAGCGTTCGGCGATGGA
TTCAAATGGCATGCCGGCGGAGGGAATCAGAGCGTGATACGTACGAAGGG
AGACCTCCGACATCTTCGAAGCGTTCGGCGATGGATTCAAATGGCATGCC
GGCGCAAGCAGGGCCTGCGCAGGCCTCTCCTCGCAACATGAAGCCGGACA
GCCCCCCGAGCATCACAATGCAAACTCCGGATAACGTGATTGGCGAGACT
CTGGTGGTGCAAGGACGGGTAGAGTTCAAGAACCTCCTGCGCATCGATGG
GCATTTCGAGCAAGCAGGGCCTGCGCAGGCCTCTCCTCGCAACATGAAGC
CGGACAGCCCCCCGAGCATCACAATGCAAACTCCGGATAACGTGATTGGC
GAGACTCTGGTGGTGCAAGGACGGGTAGAGTTCAAGAACCTCCTGCGCAT
CGATGGGCATTTCGAGGGAGAGCTTGTAGGCAACGGAAGCCTGATCATCG
GCCCCACTGCAGAGGTGATCAGCAACCTCAAAGGACTGCATGAGGGAGAG
CTTGTAGGCAACGGAAGCCTGATCATCGGCCCCACTGCAGAGGTGATCAG
CAACCTCAAAGGACTGCATGAGGTATACGTCGAAGGCATTTTGATTGGAG
ATAGCGCCTGCGAGAAAATGCAAATCCGATTTGCTGGGTGTGTGACGGGC
AACATTCAGTGCGCATCACTCGGGATGGACCCGTCCGTTGTTCTCAAGGT
ATACGTCGAAGGCATTTTGATTGGAGATAGCGCCTGCGAGAAAATGCAAA
TCCGATTTGCTGGGTGTGTGACGGGCAACATTCAGTGCGCATCACTCGGG
ATGGACCCGTCCGTTGTTCTCAAGGGAAGCGCCAACGTTAATCCGCGCGA
CAGGAATGATAAGATGTCGGACAGAAGCAAGTCTCGAGGGAATCCACCTC
GTCACAGTCATAACAGACAACGTTCTCAGGGAAGCGCCAACGTTAATCCG
CGCGACAGGAATGATAAGATGTCGGACAGAAGCAAGTCTCGAGGGAATCC
ACCTCGTCACAGTCATAACAGACAACGTTCTCAGGCTCGCATGAGCGCGG
ACCAGACCGCGTCTTCCTCCAGGCCATCGCATGGATTGACCGCGACCCTC
AATCCAGATTCGGATGACGAAAGTATCAGGCTCGCATGAGCGCGGACCAG
ACCGCGTCTTCCTCCAGGCCATCGCATGGATTGACCGCGACCCTCAATCC
AGATTCGGATGACGAAAGTATCAGTGTGCTAGCCGACGACCCGAAGTTGA
CTGTGTCCTTCGATGACGGGAAGCTGGGCAGGTCTTACAAATCGAAATCG
GGCAGGAGCAGAACGAACGGTAGTGGAAGTACATCCAGCACGTCTGCAAC
ATCTGCAACAGATTTGGAGAGTCACAGTCGAGTGTCCTCTACCGAATCGT
CCGGCTCTTCGACTGCCCCGGCGATTTCTGGAGATGGCGAAAAGGGGACG
GTGCCGAGGCTAGGGGACTCGATAACTATACCTGTTCGCACTCGGCAGTC
AATGCACCAAATTCCGGCAAGTATTCCGATGAGTGGCGCTACGTGATGTG
CTAGCCGACGACCCGAAGTTGACTGTGTCCTTCGATGACGGGAAGCTGGG
CAGGTCTTACAAATCGAAATCGGGCAGGAGCAGAACGAACGGTAGTGGAA
GTACATCCAGCACGTCTGCAACATCTGCAACAGATTTGGAGAGTCACAGT
CGAGTGTCCTCTACCGAATCGTCCGGCTCTTCGACTGCCCCGGCGATTTC
TGGAGATGGCGAAAAGGGGACGGTGCCGAGGCTAGGGGACTCGATAACTA
TACCTGTTCGCACTCGGCAGTCAATGCACCAAATTCCGGCAAGTATTCCG
ATGAGTGGCGCTACGTGA