prot_H-paniculata_contig2221.5903.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2221.5903.1
Unique Nameprot_H-paniculata_contig2221.5903.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length375
Homology
BLAST of mRNA_H-paniculata_contig2221.5903.1 vs. uniprot
Match: A0A6H5KPL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL7_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 9.240e-54
Identity = 160/431 (37.12%), Postives = 212/431 (49.19%), Query Frame = 0
Query:    1 MERMVLQSVKAVKEWGDPTVLLA----------------DVSSAAAGAPGGNSHEQGKTGIIESPTYRVGGPPSQKAGKGRGGGNEKRYRKALVLACLDILAPTVSSMLFIRWELVENESKTSLRSTVVYALLEYRRTCGKNDADALQRVQLGLLFALTTDGSSAVRLSAVAAVGEIYPSDSANAAALLLERCLDSSPKVRCLAVRLVVDEFRL-IGPAGSSLALSVLLPKRKAAETKGRAEG-KRPRTGDRVGVGGGR------GDSEAVDQAGGILERMLGHYELLKETDSERFSVLLTALVATVLR------------EDTSDENTTISHMETFSLESEKSAKPSEFDSEGSRRGTSINL----------------------------ASWEALKGPTARLCAICSCSEPAQYNALSTIIRGLFHSNG 367
            MERMV+ +VK VK WGDP+V+L                 DVSS       G+    G +  ++    R  G   +K G+    GN+K  R+ LVLAC DIL  T S M  IR E+VE E+K SLRS V   LLEYRRTC  +D   +Q V LG+L +L  DG  +VRLSA+AA+GE   SD     +LLLERCLD++PKVR LA+RL+VDEFR+ +G  G+SLA +VL P   +A+  G A G KR     R G  G R      G  +  +    +L  ++ H++ L+ETDS+RF +LL  LV  VLR             D  D NTT +       ++  +      D      G  +NL                             +W  L  P ARLCA C    PAQ + L  ++  +F   G
Sbjct:  276 MERMVVHTVKEVKAWGDPSVVLXXXXXXXXXXXXXXXXXDVSSL------GDDVVMGGSATVDRARARNKGK-GKKGGRASSAGNDKLRRRGLVLACTDILGHTSSCMSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHDVQTVLLGVLSSLALDGVVSVRLSALAAIGEGCSSDCVPGVSLLLERCLDAAPKVRALALRLLVDEFRVGVGAVGASLARAVLSPS-PSADRSGSAVGTKRAAPDSRYGPRGNRSPGVWEGGLQGGEGGVALLGELMRHHQTLQETDSDRFPLLLRNLVEAVLRGESLPPRPSDATRDNDDGNTTTNGEGRDGPDTNSALG----DVTRGSSGGGVNLYGNGVVGGAATTTGAKDSLLGPWSEGGGIAWADLAAPAARLCAACRPLGPAQLDVLDRVLGDIFQRRG 694          
BLAST of mRNA_H-paniculata_contig2221.5903.1 vs. uniprot
Match: D7FLH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH9_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 7.870e-52
Identity = 160/446 (35.87%), Postives = 213/446 (47.76%), Query Frame = 0
Query:    1 MERMVLQSVKAVKEWGDPTVLLA-------------------DVSSAAAGAPGGNSHEQGKTGIIESPTYRVGGPPSQKAGKGRGGGNEKRYRKALVLACLDILAPTVSSMLFIRWELVENESKTSLRSTVVYALLEYRRTCGKNDADALQRVQLGLLFALTTDGSSAVRLSAVAAVGEIY-------------PSDSANAAALLLERCLDSSPKVRCLAVRLVVDEFRL-IGPAGSSLALSVLLPKRKAAETKGRAEG-KRPRTGDRVGVGGGR------GDSEAVDQAGGILERMLGHYELLKETDSERFSVLLTALVATVLREDT-----------SDENTTISHMETFSLESEKSAKPSEFDSEGSRRGTSINL----------------------------ASWEALKGPTARLCAICSCSEPAQYNALSTIIRGLFHSNG 367
            MERM++ +VK VK WGDP+V+L                    +VSS       G+    G T  ++    R      +K G+G   GN+K  R+ LVLAC+DIL  T S +  IR E+VE E+K SLRS V   LLEYRRTC  +D   +Q V LG+L AL  DG  AVRLSA+AA+GE                SD   A +LLLERCLD++PKVR LA+RL+VDEFR+ IG  G+SLA +VL P   AA+  G   G  R     R    G R      G  +  +    +L  ++ H++ L+ETDSERF +LL  LV  VLR ++           +D+    +  E   +    +A     D  G   G  +NL                             +W  L  P ARLCA C    PAQ + L  ++  +F   G
Sbjct:  202 MERMIVHTVKEVKAWGDPSVVLLSXXXXXXXXXXXXXXXXXXEVSSL------GDDVVMGGTATVDRARARX-XXXXKKDGRGSNAGNDKLRRRGLVLACIDILGHTSSCLSLIRQEMVEGEAKASLRSAVADGLLEYRRTCSSSDTHGVQTVLLGVLSALALDGVVAVRLSALAAIGEALGPIKRFASVFQGCSSDCVPAVSLLLERCLDAAPKVRALALRLLVDEFRVGIGAVGASLARAVLSPS-PAADGSGSTVGTSRGAPDSREWPRGNRSPDVWEGGLQEGENGVALLGELMRHHQTLEETDSERFPLLLRGLVEAVLRGESLPPRPSDATGGNDDGNNTTKGEGRDVADANNALG---DGTGGNSGGGVNLYGDGAAGGAATTTGAKDSLLDPWSEGGGIAWADLAAPAARLCAACRPLGPAQLDVLDRVLGDIFQRRG 636          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2221.5903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPL7_9PHAE9.240e-5437.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLH9_ECTSI7.870e-5235.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..374
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..75
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 96..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2221contigH-paniculata_contig2221:10175..14432 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2221.5903.1mRNA_H-paniculata_contig2221.5903.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2221 9307..14448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2221.5903.1 ID=prot_H-paniculata_contig2221.5903.1|Name=mRNA_H-paniculata_contig2221.5903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=375bp
MERMVLQSVKAVKEWGDPTVLLADVSSAAAGAPGGNSHEQGKTGIIESPT
YRVGGPPSQKAGKGRGGGNEKRYRKALVLACLDILAPTVSSMLFIRWELV
ENESKTSLRSTVVYALLEYRRTCGKNDADALQRVQLGLLFALTTDGSSAV
RLSAVAAVGEIYPSDSANAAALLLERCLDSSPKVRCLAVRLVVDEFRLIG
PAGSSLALSVLLPKRKAAETKGRAEGKRPRTGDRVGVGGGRGDSEAVDQA
GGILERMLGHYELLKETDSERFSVLLTALVATVLREDTSDENTTISHMET
FSLESEKSAKPSEFDSEGSRRGTSINLASWEALKGPTARLCAICSCSEPA
QYNALSTIIRGLFHSNGQHVMLSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold