mRNA_H-paniculata_contig22206.5899.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A6H5KNE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE0_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.110e-70 Identity = 124/136 (91.18%), Postives = 128/136 (94.12%), Query Frame = 1
Query: 1 GERGEGWAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGGLAGVSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPAYKTYKE 408
GERGE WAAAQV ILLFVL+GNLP+LGG XXXXXXXXXXXXX GLA VSALQLG+NFS WPEPAEGGVLNTTGVY+LCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKL VHPAYKTYKE
Sbjct: 70 GERGEAWAAAQVVILLFVLMGNLPLLGGSXXXXXXXXXXXXXXGLATVSALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLVAVHPAYKTYKE 205
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: D8LPT1_ECTSI (S-isoprenylcysteine O-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT1_ECTSI) HSP 1 Score: 219 bits (558), Expect = 3.210e-70 Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1
Query: 1 GERGEGWAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGGLAGVSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPAYKTYKE 408
GERGE WAAAQV ILLFVLLGNLP+LGG XXXXX XXXX GL VSALQLG+NFS WPEPAEGGVLNTTGVY+LCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKL VHPAYKTYKE
Sbjct: 83 GERGEAWAAAQVTILLFVLLGNLPLLGGSLEXXXXXGLXXXXAGLTTVSALQLGRNFSPWPEPAEGGVLNTTGVYSLCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLVAVHPAYKTYKE 218
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A836C7I2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I2_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.810e-41 Identity = 88/136 (64.71%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 1 GERGEGWAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGGLAGVSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPAYKTYKE 408
GERGE IL +++G++P+LGG XXXXXXXXXXXXX S L LGKN S WP+P E VL TTGVY++CRHPMYAGL+AFS GLGF+TDSFTRIALA LL Y LD+KA EE+ L VHPAYKTY+E
Sbjct: 105 GERGEVLTLIPYAILALLIVGDIPLLGGPXXXXXXXXXXXXXXXXXLTSLLGLGKNLSPWPQPCENNVLITTGVYSICRHPMYAGLLAFSFGLGFATDSFTRIALAALLLYTLDKKATEEEKALEAVHPAYKTYQE 240
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A7S2XU15_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU15_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.010e-22 Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 1 GERGEGWAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGGLAGVSALQLGKNFSLWPEPAEGGV---LNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPAYKTY 402
G+RGE + AQV ++LFVL+G +PILG G+A V ++G + S WP P L +G+++ RHP+Y+GL+ FS GL STDS R+ L +L YVLD K+D EE+KL V P Y Y
Sbjct: 115 GQRGEQYVIAQVLLVLFVLIGGVPILGDPLASLLGPSLLLTGLGVAVVGVNEMGGSLSPWPVPPSNESNKQLIKSGLFSKVRHPIYSGLLLFSAGLSISTDSANRLLLTAILLYVLDVKSDYEEKKLMEVFPDYAEY 251
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A7S0MLQ9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MLQ9_9CRYP) HSP 1 Score: 85.1 bits (209), Expect = 1.220e-18 Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 130 GLAGVSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPAYKTYK 405
GLAG + LG+N + WP+P E L T G YALCRHP+Y GL+ GL +T S R+ A L ++DRKA EE LS H Y +YK
Sbjct: 10 GLAGQGSRSLGENLTPWPKPTEENQLTTDGAYALCRHPIYGGLLLACFGLSITTASPARLLFAAALFVLMDRKAAREEVWLSEKHDGYSSYK 101
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A835Y2F1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y2F1_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 1.300e-18 Identity = 57/139 (41.01%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 1 GERGEGWAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGGLAGVS--ALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPA-YKTYKE 408
G RGE W A Q ++L LL P G GG A S A +LG N + P P E L TTG+Y CRHP+YAGL+ F+LGL ++ S TR+A+ L +VL+ K +MEEE L H Y+ Y+E
Sbjct: 74 GTRGEAWVAGQ--LVLCALLAFPPA--GLTSFIDTAAVILALGGAAVFSYAAYELGDNLTPLPAPREDAKLVTTGLYGYCRHPIYAGLLVFALGLSVASHSETRLAITAALFWVLNSKVEMEEEGLVAKHGRQYEVYRE 208
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A8J6C9G8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9G8_DIALT) HSP 1 Score: 81.6 bits (200), Expect = 3.230e-16 Identity = 48/130 (36.92%), Postives = 63/130 (48.46%), Query Frame = 1
Query: 1 GERGEGWAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGG--LAGVSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVH 384
G+RGE + Q+ L+ V+ G+LP L G L ++A +LG N S WP P VL TTG YA CRHPMY GL+ +LG S R + LG L +A +EE +L H
Sbjct: 76 GQRGEAYVGVQLLALILVVFGDLPGLPLLRLLHLILGPLCVSSGCVLVALAAFRLGSNLSPWPVPVAENVLQTTGAYAWCRHPMYVGLLVLALGCATMAQSVPRALVTVCLGLCLRAQALVEERRLRERH 205
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: A0A7S0E531_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E531_9CRYP) HSP 1 Score: 76.3 bits (186), Expect = 3.850e-14 Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 142 VSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVH-PAYKTY 402
+S LG++ S +P+ E VL T GVY++CRHPMY GL+ +GL +T SF+R+ +L +L++KAD+EE L H +YK Y
Sbjct: 136 ISTQDLGESLSPFPKATEDNVLQTDGVYSICRHPMYGGLILACIGLAMTTVSFSRMLFTIILLLILNQKADVEEGFLVQKHGESYKEY 223
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: UPI00042365D6 (isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Flavobacterium gelidilacus TaxID=206041 RepID=UPI00042365D6) HSP 1 Score: 67.8 bits (164), Expect = 1.230e-11 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 142 VSALQLGKNFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVVHPAYKTYK 405
+S LQL KN +++P P L T G+Y RHP+Y+GL+ F+LG F S+ +IA+A +L + K + EE+KL Y YK
Sbjct: 52 LSVLQLNKNLTVFPTPKTDSELITFGMYKFSRHPIYSGLILFTLGYAFFKASYFKIAIALILLLLFYFKTNYEEQKLLQKFSNYNDYK 139
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Match: F0Y4Z7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z7_AURAN) HSP 1 Score: 69.3 bits (168), Expect = 3.950e-11 Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 19 WAAAQVGILLFVLLGNLPILGGXXXXXXXXXXXXXXGGLAGVSALQLGK-NFSLWPEPAEGGVLNTTGVYALCRHPMYAGLVAFSLGLGFSTDSFTRIALACLLGYVLDRKADMEEEKLSVV 381
+ A Q +LL + G +P++GGXXXXXXXXXXXXXX L+LG N + + P G L T GV+AL RHP+YAGLV S G +T SF R + +L +LD K++ EE+KL V
Sbjct: 92 FVAGQAVLLLCLAAGGVPLVGGXXXXXXXXXXXXXXXXXXXXXLLELGPANLTPFATPVAGNELKTNGVFALSRHPIYAGLVVASAGFSVATVSFQRALVTGMLFLLLDSKSEYEEKKLREV 213 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22206.5899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22206.5899.1 >prot_H-paniculata_contig22206.5899.1 ID=prot_H-paniculata_contig22206.5899.1|Name=mRNA_H-paniculata_contig22206.5899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp GERGEGWAAAQVGILLFVLLGNLPILGGSLEILAGPGLLLGGGGLAGVSAback to top mRNA from alignment at H-paniculata_contig22206:1009..2682+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22206.5899.1 ID=mRNA_H-paniculata_contig22206.5899.1|Name=mRNA_H-paniculata_contig22206.5899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig22206:1009..2682+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22206:1009..2682+ >mRNA_H-paniculata_contig22206.5899.1 ID=mRNA_H-paniculata_contig22206.5899.1|Name=mRNA_H-paniculata_contig22206.5899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig22206:1009..2682+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |