prot_H-paniculata_contig22205.5898.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22205.5898.1
Unique Nameprot_H-paniculata_contig22205.5898.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: W8AXM4_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AXM4_CERCA)

HSP 1 Score: 98.2 bits (243), Expect = 4.260e-21
Identity = 62/167 (37.13%), Postives = 84/167 (50.30%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFET---------IRSL------------HVDVTYCFQPGPT--------PQFSPSSRDIPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            M+ E +ALM+NG WE  D    P G+  I  +W+F      DG++  HKARLVAQ   Q   EDFFET         IR +            H+DV   +  G          PQ   +++ +  V +L KS+ GLKQ+GR+WNN ++  L Q+G  R  T SCLY
Sbjct:  716 MQTEHDALMKNGTWELVD---CPQGKNVIGCRWVFTTKYNSDGTIDKHKARLVAQGCGQRRFEDFFETYAPVARHSAIRLILALGAKHKLLINHIDVVAAYLHGELADDIYMRQPQMFVNTKFLERVCKLKKSIYGLKQAGRDWNNKIDVILSQIGFTRCKTDSCLY 879          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: Q8WRX5_ANOGA (Pol polyprotein (Fragment) n=2 Tax=Anopheles gambiae TaxID=7165 RepID=Q8WRX5_ANOGA)

HSP 1 Score: 90.5 bits (223), Expect = 2.060e-18
Identity = 59/166 (35.54%), Postives = 83/166 (50.00%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDF------------FETIRSL---------HVDVTYCFQPGPTPQF----SPSSRDIPFVRRLC---KSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            MEEE ++L EN  WE      LP  RKA+ +KW+F+R +  DG +  +KARLVA+ FSQV G D+            F T+ S+         HVDV   +  G   +      P+  +I     +C   KS+ GLKQ+GR WN T+ + L  +G   S    CL+
Sbjct:  448 MEEEIKSLHENATWEIAS---LPKDRKAVGSKWVFKRKMDGDGKIVQYKARLVAKGFSQVYGADYDEVFAPVAKQTTFRTLLSIAARRKLIVKHVDVKSAYLYGDLAETIYMKQPTGFEIGSKNDVCLLKKSLYGLKQAGRVWNQTITEVLRSLGFHSSEADPCLF 610          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 90.5 bits (223), Expect = 2.120e-18
Identity = 61/170 (35.88%), Postives = 84/170 (49.41%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFET---------------------IRSLHVDVTYCFQPGP---------TPQFSPSSRDIPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQV-GLDRSTTSSCLYF 139
            M+ E   L  NG W+    G LP GRKAI +KW+F     +DGS+  +KARLVAQ FSQ+ G+D+F+T                     + S  +D+   +  GP          P +   S  + +V  L K++ GLKQ+GR WN+ LN  L  + G  RS    CLYF
Sbjct:  851 MDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQV-YV--LIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYF 1014          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A182GDL1_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDL1_AEDAL)

HSP 1 Score: 88.2 bits (217), Expect = 2.520e-18
Identity = 59/167 (35.33%), Postives = 85/167 (50.90%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFE---------TIRSL------------HVDVTYCFQPGPTPQFSPSSRDIPFVRR--------LCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            M+EE+++LMENG W   +   LPAGRKAI +KW+F++     G+V   KARLVAQ FSQ  G D+           T+R+L            H+DV   +  G   +     +   FVRR        L +S+ GLKQ  + WN+T+   L ++G  +S    CL+
Sbjct:   28 MQEEYDSLMENGTWVLAE---LPAGRKAIGSKWVFKKKEDSAGNVCKFKARLVAQGFSQQFGVDYDSVFAPVAAQTTLRTLLSVAGKKKMKVRHLDVKSAYLHGQLKEELYMQQPKGFVRRGEEKLVCRLQRSLYGLKQGAKVWNDTICAILGEIGFHQSRADPCLF 191          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A4Z0ABW0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0ABW0_9AGAM)

HSP 1 Score: 90.1 bits (222), Expect = 2.860e-18
Identity = 60/168 (35.71%), Postives = 85/168 (50.60%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDF---------FETIRSL------------HVDVTYCFQPGPT--------PQFSPSSRDIPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLYF 139
            M+EE++ L++ G WE     RLPAG KAI ++W ++     DG+   ++ARLVAQ FSQ  G DF         FE+ R +             VDV   +  G          P+   S  +I  V RL KS+ GLKQSGR WN  L+  L+ +G  +S +  C+Y+
Sbjct: 1013 MQEEYDVLLKTGTWEKV---RLPAGCKAIGSRWTYKVKHDADGNPVRYRARLVAQGFSQRPGVDFNETHSPVARFESFRLVFALVARFGWLFEQVDVKSAYLNGTLDEEIFMHQPEGFISPDEIDLVLRLLKSIYGLKQSGRVWNKVLDGELLNIGFKQSNSDPCVYY 1177          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A5S6QBM2_TRIMR (Integrase catalytic domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QBM2_TRIMR)

HSP 1 Score: 88.2 bits (217), Expect = 1.310e-17
Identity = 62/166 (37.35%), Postives = 80/166 (48.19%), Query Frame = 0
Query:    3 EEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFET------------------IRSLHV---DVTYCFQPGPT---------PQFSPSSRDIPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            EE  +L     WE     +LPAGRK I +KW+F+   K DG++  +KARLVA+ FSQ  GED+ ET                  +RSLHV   DV   +  G           P F  S  +   V RL +S+ GLKQS R WN    + L  +G DR+    CLY
Sbjct:  364 EEMASLKNRDVWELV---KLPAGRKVISSKWVFKIKRKADGAIDTYKARLVARGFSQRYGEDYDETFAPVVKHETIRMLLSIAAMRSLHVRHFDVKCAYLNGEIHEELYMEQPPGFVQSGNEN-LVLRLKRSIYGLKQSARAWNKKATEVLTSLGFDRANADLCLY 525          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A182GGE6_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GGE6_AEDAL)

HSP 1 Score: 87.4 bits (215), Expect = 2.500e-17
Identity = 59/165 (35.76%), Postives = 81/165 (49.09%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFET---------IRSL------------HVDVTYCFQPGPTPQFSPSSRDIPFVR------RLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            M+EE ++L  NG W      +LPAGR AI  KWIF+    EDG    +KARLVA+ FSQ  G D+ ET         +R++             +DV   F  G   +     +   F R      RL +S+ GLKQ+ R WN   N+F+ ++G +RS    CLY
Sbjct:  672 MKEEMDSLERNGTWTLT---KLPAGRSAISCKWIFKIKPGEDGQPTRYKARLVARGFSQKRGFDYSETYSPVARLDTLRTVLAMANREGMVVHKMDVKTVFLNGELTEEIYMEQPEGFTRKENLVCRLKRSLYGLKQASRQWNECFNEFVKRLGFERSVNDPCLY 833          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A182GDJ8_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDJ8_AEDAL)

HSP 1 Score: 86.3 bits (212), Expect = 4.320e-17
Identity = 59/168 (35.12%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFE---------TIRSL------------HVDVTYCFQPGPT---------PQFSPSSRDIPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            M +E ++  +NG WE  DP   P GRK +  +W+++      G +  +KARLVAQ +SQ  G D+ E         T+R L            H DV   +  G           P F+   R+   V RL KS+ GLKQS R WN  L+  LV++G ++S T SCLY
Sbjct:    1 MVDELKSHQQNGTWELVDP---PEGRKVVGCRWVYKLKRNAAGEITKYKARLVAQGYSQKYGVDYDEVFAPVTSHTTLRVLLAVASKRRMTLKHFDVKTAYLYGDLDEEIFMRQPPGFAVKGRED-MVCRLKKSIYGLKQSARCWNQRLHSVLVEMGFEQSATDSCLY 164          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A067T6Q3_GALM3 (Uncharacterized protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T6Q3_GALM3)

HSP 1 Score: 86.7 bits (213), Expect = 4.710e-17
Identity = 60/167 (35.93%), Postives = 81/167 (48.50%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDF-----------FETIRSL------------HVDVTYCFQPGPTPQF-----SPSSRD-IPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLY 138
            M+EE+  L++ G W+  D   LPA RKAI ++W+FR+   E G+V   KARLVAQ FSQ  G DF           FET+R++              DV   +  G   +       P   D  P V  L +S+ GLKQ+G  WN  LN  L ++G  +  T  C Y
Sbjct:  878 MDEEYNILLKMGTWKMGD---LPADRKAIGSRWVFRKKKDEHGTVIKFKARLVAQGFSQKPGTDFSNDGTFAPVMRFETLRTVLAFAAVHNLKLRQFDVKGAYLHGTLKELIYMQQPPGYEDGTPRVCILIRSLYGLKQAGNIWNRELNRALAEIGFTQLKTDYCCY 1041          
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Match: A0A6A2XKN2_HIBSY (Protein NRT1/ PTR FAMILY 6.2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XKN2_HIBSY)

HSP 1 Score: 86.7 bits (213), Expect = 4.720e-17
Identity = 52/135 (38.52%), Postives = 74/135 (54.81%), Query Frame = 0
Query:    1 MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKARLVAQRFSQVEGEDFFETIRSLHVDVTYCFQPGPTPQFSPSSRD-IPFVRRLCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTS 134
            + +E  AL +NG W       LP  R A+  KW+F+     DG++  +KARLVAQ FSQV G+DF ET   +  +  +  QP   P F   + D    V +L KS+ GL+Q+ R WNN L   L+Q+G   S ++
Sbjct: 1112 VHDELAALQQNGTWSLVS---LPYRRIAVECKWLFKLKKNPDGTIQQYKARLVAQGFSQVPGQDFKETFSPVLSEEVFMKQP---PGFEKVAEDGTKLVCKLHKSLYGLRQAPRKWNNKLKQSLLQMGFRMSKST 1240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22205.5898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W8AXM4_CERCA4.260e-2137.13Retrovirus-related Pol polyprotein from transposon... [more]
Q8WRX5_ANOGA2.060e-1835.54Pol polyprotein (Fragment) n=2 Tax=Anopheles gambi... [more]
Q45W64_PHACR2.120e-1835.88Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A182GDL1_AEDAL2.520e-1835.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Z0ABW0_9AGAM2.860e-1835.71Uncharacterized protein (Fragment) n=1 Tax=Hericiu... [more]
A0A5S6QBM2_TRIMR1.310e-1737.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A182GGE6_AEDAL2.500e-1735.76Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A182GDJ8_AEDAL4.320e-1735.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067T6Q3_GALM34.710e-1735.93Uncharacterized protein (Fragment) n=1 Tax=Galerin... [more]
A0A6A2XKN2_HIBSY4.720e-1738.52Protein NRT1/ PTR FAMILY 6.2 n=1 Tax=Hibiscus syri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..69
e-value: 3.2E-8
score: 33.5
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..68
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22205contigH-paniculata_contig22205:3097..3597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22205.5898.1mRNA_H-paniculata_contig22205.5898.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22205 3085..3597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22205.5898.1 ID=prot_H-paniculata_contig22205.5898.1|Name=mRNA_H-paniculata_contig22205.5898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MEEEWEALMENGRWESEDPGRLPAGRKAIRTKWIFRRNLKEDGSVACHKA
RLVAQRFSQVEGEDFFETIRSLHVDVTYCFQPGPTPQFSPSSRDIPFVRR
LCKSMSGLKQSGRNWNNTLNDFLVQVGLDRSTTSSCLYFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like