mRNA_H-paniculata_contig22203.5897.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: D8LE37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE37_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.510e-48 Identity = 94/130 (72.31%), Postives = 108/130 (83.08%), Query Frame = 1
Query: 1 FDHSQRINLRGYLKETNEEEEEGRRGEREGDASSAMVSYHEREALERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDFTPEP 390
FD S R+NLRGYL+ TNEE++ R E E ++A+V + ++ LERSTEF D EI+AAFKFLDLD N HIGAAEIRHILICMGELITDEEVDMMISMVD DGDGQVS+EEFHRL+IDPDPSR DF+ EP
Sbjct: 668 FDDSLRVNLRGYLEVTNEEDQTAGRPEEE---TTAIVGHQDQPPLERSTEFTDDEISAAFKFLDLDRNLHIGAAEIRHILICMGELITDEEVDMMISMVDSDGDGQVSFEEFHRLVIDPDPSRADFSTEP 794
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: A0A7S2FW97_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW97_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.160e-32 Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 139 RSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDF 378
+STEF+DAEI AAF+F+DLD N IGAAEIRHILICMGELITDEEVDMMI M+D DGDGQVSY EF+ L+ DPDPSRPDF
Sbjct: 487 KSTEFSDAEIEAAFRFIDLDKNGFIGAAEIRHILICMGELITDEEVDMMIGMIDGDGDGQVSYREFYSLVTDPDPSRPDF 566
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: A0A1V9YHN9_9STRA (Calmodulin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YHN9_9STRA) HSP 1 Score: 119 bits (298), Expect = 6.620e-30 Identity = 60/102 (58.82%), Postives = 77/102 (75.49%), Query Frame = 1
Query: 136 ERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDF----TPEPTQGERKEEPIASQ 429
+ ++EF++AEI +AFKF+DLD N IGAAEIRHILICMGELITD EVDMM+ MVD DGDGQ+S+EEF +++I PDP P F P PT+ +K E + +
Sbjct: 46 DNTSEFSEAEILSAFKFIDLDKNTFIGAAEIRHILICMGELITDAEVDMMVKMVDRDGDGQISFEEFRKMVIHPDPGDPSFGKDDEPAPTEVVQKAEVVTEE 147
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: F0XXY1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXY1_AURAN) HSP 1 Score: 112 bits (279), Expect = 1.650e-29 Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 139 RSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLI 348
R+TEF+DAEI AAFKF+DLD N +IGA+EIRH+L+CMGELITDEEVDMMI MVD DGDGQVSY EF+ ++
Sbjct: 25 RTTEFSDAEIEAAFKFIDLDKNGYIGASEIRHVLVCMGELITDEEVDMMIKMVDNDGDGQVSYHEFYDVV 94
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: A0A6A5ASX8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ASX8_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.250e-28 Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 1
Query: 130 ALERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDF 378
A + +EF++ ++ AFKF+DLD N IGAAEIRHILICMGELITD EVD M+ MVD DGDGQVS+EEF +L++ PDP DF
Sbjct: 44 APDNKSEFSEDDVLGAFKFIDLDKNTFIGAAEIRHILICMGELITDAEVDEMVRMVDRDGDGQVSFEEFRKLVVHPDPGSMDF 126
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: A0A5D6XRG4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRG4_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.460e-28 Identity = 56/88 (63.64%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 133 LERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDFTPEPTQ 396
L RS EF + EI AF+FLDLD N IGAAE+RH+LICMGELITDEE+DMM+ + D DGDGQVS++EF R++I PDPS DF P +
Sbjct: 532 LSRSGEFTEEEILGAFRFLDLDRNNFIGAAELRHLLICMGELITDEEIDMMVKLCDTDGDGQVSFDEFRRMVIHPDPSSADFATAPVE 619
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: K3WZ00_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ00_GLOUD) HSP 1 Score: 119 bits (297), Expect = 2.570e-28 Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 133 LERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDFTPEPTQ 396
+E S EF++ EI AFKF+DLD N +GAAE+RH+LICMGELITDEE+DMMI + D DGDGQVS++EF R++I PDP PDF P +
Sbjct: 420 VENSGEFSEEEILGAFKFIDLDRNNFVGAAELRHLLICMGELITDEEIDMMIQLCDTDGDGQVSFDEFRRMVIHPDPGSPDFALAPIE 507
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: T0QC60_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QC60_SAPDV) HSP 1 Score: 118 bits (296), Expect = 3.390e-28 Identity = 57/81 (70.37%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 136 ERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDF 378
+ ++EF++AEI +AFKF+DLD N IGAAEIRHILICMGELITD EVDMM+ MVD DGDGQVS+EEF +L+I PDP P F
Sbjct: 602 DNTSEFSEAEILSAFKFIDLDKNAFIGAAEIRHILICMGELITDAEVDMMVKMVDRDGDGQVSFEEFRKLVIHPDPGDPSF 682
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: A0A067CJW1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CJW1_SAPPC) HSP 1 Score: 118 bits (296), Expect = 3.410e-28 Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 136 ERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDF 378
+ ++EF++AEI +AFKF+DLD N +GAAEIRHILICMGELITD EVDMM+ MVD DGDGQVS+EEF +L+I PDP P F
Sbjct: 672 DNTSEFSEAEILSAFKFIDLDKNSFVGAAEIRHILICMGELITDAEVDMMVKMVDRDGDGQVSFEEFRKLVIHPDPGDPSF 752
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Match: A0A1V9Z6C2_9STRA (Calmodulin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6C2_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.050e-28 Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 136 ERSTEFNDAEIAAAFKFLDLDANQHIGAAEIRHILICMGELITDEEVDMMISMVDIDGDGQVSYEEFHRLIIDPDPSRPDF 378
+ ++EF++AEI +AFKF+DLD N IGAAEIRHILICMGELITD EVDMM+ MVD DGDGQVS+EEF +++I PDP P F
Sbjct: 460 DNTSEFSEAEILSAFKFIDLDKNTFIGAAEIRHILICMGELITDAEVDMMVKMVDRDGDGQVSFEEFRKMVIHPDPGDPSF 540 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22203.5897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22203.5897.1 >prot_H-paniculata_contig22203.5897.1 ID=prot_H-paniculata_contig22203.5897.1|Name=mRNA_H-paniculata_contig22203.5897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp FDHSQRINLRGYLKETNEEEEEGRRGEREGDASSAMVSYHEREALERSTEback to top mRNA from alignment at H-paniculata_contig22203:187..2616- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22203.5897.1 ID=mRNA_H-paniculata_contig22203.5897.1|Name=mRNA_H-paniculata_contig22203.5897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2430bp|location=Sequence derived from alignment at H-paniculata_contig22203:187..2616- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22203:187..2616- >mRNA_H-paniculata_contig22203.5897.1 ID=mRNA_H-paniculata_contig22203.5897.1|Name=mRNA_H-paniculata_contig22203.5897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig22203:187..2616- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |