prot_H-paniculata_contig2220.5895.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2220.5895.1
Unique Nameprot_H-paniculata_contig2220.5895.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length538
Homology
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: D8LJZ1_ECTSI (Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral inner membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ1_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 2.960e-65
Identity = 125/310 (40.32%), Postives = 186/310 (60.00%), Query Frame = 0
Query:  166 AVDGVTSAAXSAAGTAQQAQPMIEASVPSAVELGLY-PVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIP-VVPKEPPPGADGKELTWMAVLGAPNPFKAHKMMLDQQAANSHSIVGGG 473
            A+ G   AA +AAGTA QAQ  +E + P   ++ LY P ++AM  +D + +TTGMPYW +IV ITV +R+A+LP+ ++  RN AR   MKPE D L+ A++ D  +   RK  RYR E+KALFQK+   L      P+VQ+P F+ F+  LRRM +  P +A+GG  WFQDLGA DPY + P ++ +  + M E G +G      S  ++  MRG+ LL+ P+T+ +  G F+YW TSN +S++Q++  K    +K F  P + P +       KE+ W+ VLG  +P K ++ M DQ+   +  + G G
Sbjct:   23 AMAGGADAAMAAAGTADQAQAALEVA-PETFKMALYTPPQVAMMAVDYVHATTGMPYWMTIVAITVGIRTAILPIGLLAARNGARTAAMKPEMDELQAAIKGDQQSSQPRKADRYRQETKALFQKHKASLVMNAALPIVQLPLFIGFFLGLRRMPDVVPEFATGGVLWFQDLGAPDPYMIFPVMTGVMMMAMAELGGEGGALAGSSVKMKAGMRGMALLVTPLTMYVSTGVFVYWTTSNFYSILQTLAFKSSGIKKFFDFPDLPPNKLKSNTAEKEIGWLDVLGGDHPIKEYRKMQDQREVQAWFVEGEG 331          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A6H5J862_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J862_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.360e-63
Identity = 124/310 (40.00%), Postives = 187/310 (60.32%), Query Frame = 0
Query:  166 AVDGVTSAAXSAAGTAQQAQPMIEASVPSAVELGLY-PVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIP-VVPKEPPPGADGKELTWMAVLGAPNPFKAHKMMLDQQAANSHSIVGGG 473
            A+ G   AA +AAGTA+QAQ  ++ + P   ++ LY P ++AM  +D + +TTGMPYW +I+ ITV +R+A+LP+ ++  RN AR   MKPE DAL+ A++ D  +   RK  RYR E+KALFQK+   L      P+VQ+P F+ F+  LRRM +  P +A+GG  WFQDLGA DPY + P ++ +  + M E G +G      S  ++  MRG+ LL+ P+T+ +  G F+YW TSN +S++Q++  K    +K F  P + P +       KE+ W  VLG  +P K ++ M DQ+   +  + G G
Sbjct:  198 AMAGSADAAMAAAGTAEQAQATLDVA-PETFKMALYTPPQLAMMAVDYVHATTGMPYWMTIIAITVGIRTAILPIGLLAARNGARTAAMKPEMDALQAAIKGDQQSSQPRKADRYRQETKALFQKHKASLVMNAALPIVQLPLFIGFFLGLRRMPDVVPEFATGGVLWFQDLGAPDPYMIFPVMTGVMMMAMAELGGEGGALAGSSVKMKAGMRGMALLVTPLTMYVSTGVFVYWTTSNFYSILQTLAFKSSAIKKFFDFPDLPPNKLKRDTAEKEIGWFDVLGGDHPIKEYRKMQDQREVQAWFVEGEG 506          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A7S2RKG9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKG9_9STRA)

HSP 1 Score: 182 bits (463), Expect = 5.120e-49
Identity = 98/255 (38.43%), Postives = 154/255 (60.39%), Query Frame = 0
Query:  177 AAGTAQQAQPMIEASVPSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPVVPKEP 431
            AAG    A     A+V +A +LG +P  + MQ ID I +T+GMP+W +I+ +T+ LR AMLP+ + T +N+ RM  +KPE + + E ++ D  +   ++   Y  + +ALFQKYD    R  +   +Q+P FMSF+F L+ M + +P    GG  WF DL AADP  + P ++  SF+ M+E G+DGM++   +  ++  MRG+ LL++P T  +P   F YW  +N  S+ Q++ LK+P+ R  FG+P  P+ P
Sbjct:   32 AAGAGDSAAGGAAAAVDAAAQLGYWPSHMVMQGIDLIHTTSGMPFWMTIMAVTISLRVAMLPVLLSTIKNARRMTQLKPELEIISERIKADPKSNDPQRQQMYSKQLQALFQKYDAHPIRSFYGIGIQLPVFMSFFFGLKSMGDFYPEIQQGGTLWFTDLAAADPTFIFPVVTTASFIFMIELGADGMDANQQA-TMKNVMRGLGLLMLPFTYQMPCAVFCYWSAANFMSVCQTLALKVPSVRDYFGVPPPPQPP 285          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A482SHT9_9ARCH (YidC/Oxa1 family membrane protein insertase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHT9_9ARCH)

HSP 1 Score: 181 bits (460), Expect = 1.110e-48
Identity = 100/253 (39.53%), Postives = 153/253 (60.47%), Query Frame = 0
Query:  201 YPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPVVPKEPPPGADGKELTWMAVLGAPNPFK 453
            Y V   M+ ID + +  G+PYW +IV  TV LR  +LP+ + TT++SAR+ + +PE   ++EA+ +D  T  +R  L+Y+ E  A+  K+ V   R L +P+ Q P F++F+ ALR M   FP + +GG  WF +L A D +  LP  +++SFLLM+E G+DGM +   +   R  MRG+ + +VP+T ++P G F+YW+T+N FSLVQ+++LK  + RK+  IP +P E  P            L   NPFK
Sbjct:   90 YVVGTVMKFIDYVHTLAGVPYWEAIVFTTVGLRFLLLPVVLKTTQSSARLAVARPEMQKVQEAMAKDTNTADSRVQLKYQKEMSAVLSKHKVNPVRALLWPVCQFPIFIAFFMALRDMGTYFPGFLTGGDFWFTNLSAPDSFYYLPIANSVSFLLMIELGADGMPTQQQA-TFRWVMRGLAVALVPLTSSMPQGLFVYWVTNNVFSLVQTMILKQESVRKALDIPKIPTENTPN-----------LKVVNPFK 330          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A067C4W9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C4W9_SAPPC)

HSP 1 Score: 174 bits (441), Expect = 5.720e-46
Identity = 90/235 (38.30%), Postives = 144/235 (61.28%), Query Frame = 0
Query:  193 PSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPVV 427
            P+  E+G    EIA++V+D    TTG+P+WA+I+  TV +RS   P++V++ RNSARM +MKP+ + L+E ++        +K   +RA +K LF++++V+       PL Q+P F+ F++ L+ +S   P YA  G  WFQDL A DP   LP +S+   +  +E G DG+    +S   ++ MR V L++VP+     +G  +YW+TSN F+L Q+++LK+P  R + GIP V
Sbjct:   79 PATAEMGYSLAEIAVRVLDVAHVTTGLPWWATIIATTVAVRSVFFPISVMSMRNSARMNIMKPKLEKLQEEIKSSQEAYDPKKMAEFRARAKNLFKEHEVRPFMSFLMPLSQLPIFLGFFWGLQEISTHIPEYAGEGTLWFQDLAAPDPLYALPVISSALMIASMEAGGDGLPKEYLS-QAKMGMRMVALIMVPVATTFQSGILVYWVTSNCFTLTQTMLLKVPAVRSALGIPSV 312          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A024U946_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U946_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.460e-44
Identity = 92/265 (34.72%), Postives = 162/265 (61.13%), Query Frame = 0
Query:  190 ASVPSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPVVPKEPPPGADGKELTWMAVLGAPNPFKA 454
            A  P  V++G    E+A++ +D + + +G+P+WA+I+  TV++RSA  P+++++ +NSARMG+++P+ + L+  ++         K   +RA ++ALF+++ V+       P+ Q+P F+ F++ L+ +S+  P YA+ GA WF++L A DP   LP +S+   +  LE G +GM    +    ++ MR V L+++P+ IN  +G  +YW+TSN F+L Q++VLK+P  + + GIP  P  PPP      L   +V   P+PF+A
Sbjct:   79 AVAPVTVDMGYSLAEMAIRTMDVVHAMSGLPWWATIIATTVIVRSAFFPISIMSMKNSARMGILQPKLEKLQNEIKNSPDAYDPAKMTEFRARAQALFKEHKVRPFMSFLMPISQLPIFLGFFWGLQDISKYIPGYATDGAFWFENLAAPDPTYALPVISSALMVASLEAGGEGMPPEYID-KAKMGMRAVALIMIPVAINFESGILLYWVTSNIFTLTQTLVLKIPGLKAALGIPS-PVAPPP------LMTASVSKFPSPFQA 335          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A1V9ZCP9_9STRA (Mitochondrial inner membrane protein OXA1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCP9_9STRA)

HSP 1 Score: 169 bits (427), Expect = 6.250e-44
Identity = 87/233 (37.34%), Postives = 145/233 (62.23%), Query Frame = 0
Query:  193 PSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIP 425
            P+  E+G    EIA++V+D + +TTG+P+WA+IV  TV +RS   P++V++ +NSARM +MKP+ D L+E +         +K   +RA ++ LF+++ V+       PL Q+P F+ F++ L+ +++  P YA+ G  WF++L   DP   LP LS+   +  +E G +GM    +S   ++ MR V L++VP+     +G  +YW+TSNTF+L Q+++LK+P  R + GIP
Sbjct:   83 PATAEMGYSLAEIAVRVLDVVHATTGLPWWATIVASTVAVRSMFFPISVMSMKNSARMNIMKPKLDKLQEEIRNAQDAHDPKKMAEFRARAQNLFKEHQVRPFLSFLMPLSQLPIFLGFFWGLQEITKFIPDYATDGTLWFENLAEPDPTYALPILSSALMIASMEAGGEGMPKEYLS-QAKMGMRLVALIMVPVATTFQSGVLVYWVTSNTFTLTQTLLLKVPAIRSALGIP 314          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A1V9YQZ6_9STRA (Mitochondrial inner membrane protein OXA1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQZ6_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.810e-44
Identity = 91/247 (36.84%), Postives = 148/247 (59.92%), Query Frame = 0
Query:  193 PSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPA------------GTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPVV 427
            P+  E+G    EIA++V+DG+  TTG+P+WA+I+  TV +RSA  P++V++ RNSARM +MKP+ + L++ +         +K   +RA ++ LF+++ V+       PL Q+P F+ F++ L+ +S   P+YAS GA WFQ+L + DP   LP LS+   +  +E G DG+    +S   ++ MR V L++VP+     +            G  +YW+TSN F+L Q+++LK+P  R + GIP V
Sbjct:   61 PATAEMGYSLAEIAIRVMDGVHMTTGLPWWATIIATTVAVRSAFFPISVMSMRNSARMNIMKPKLEKLQDEIRASQEAYDPKKMAEFRARAQNLFKEHQVRPFLSFLMPLSQLPIFLGFFWGLQEISTFIPSYASDGALWFQELASPDPLYALPVLSSALMIASMEAGGDGLPKEYVS-QAKMGMRMVALIMVPVATTFQSVAKASMELRALQGILVYWVTSNCFTLTQTMLLKVPAVRSALGIPSV 306          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: W4FLF9_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLF9_9STRA)

HSP 1 Score: 169 bits (427), Expect = 7.560e-44
Identity = 90/262 (34.35%), Postives = 160/262 (61.07%), Query Frame = 0
Query:  193 PSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPVVPKEPPPGADGKELTWMAVLGAPNPFKA 454
            P   E+G    EIA++ +D + +T+G+P+WA+I+  T+++RSA  P+++++ RNSARMG+++P+   L++ ++         K   +RA ++ALF+++ V+       P+ Q+P F+ F++ L+ +++  P YA+ GA WF++L A DP   LP LS+   +  LE G +GM +  +    ++ MR V L+++P+ +N  +G  +YW++SN F+L Q++VLK+P  +K   IP  P  PPP      L    +   P+PF+A
Sbjct:   85 PVTAEMGYSLAEIAIRTLDVVHATSGLPWWATIIATTIVVRSAFFPISIMSMRNSARMGILQPKLQKLQDEIKSSPDAYDPAKMTEFRARAQALFKEHKVRPFMSFLMPISQLPIFLGFFWGLQDIAKYIPGYAADGAFWFENLAAPDPTYALPVLSSALMVASLEAGGEGMPAEYID-KAKMGMRIVALIMIPVAVNFESGILLYWVSSNIFTLTQTLVLKIPGVKKLLDIPT-PVTPPP------LATTNLSSFPSPFQA 338          
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Match: A0A6A3UNJ7_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UNJ7_9STRA)

HSP 1 Score: 163 bits (412), Expect = 9.470e-42
Identity = 93/254 (36.61%), Postives = 154/254 (60.63%), Query Frame = 0
Query:  177 AAGTAQQAQPMIEAS----VPSAVELGLYPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARMGLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWFPLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSALSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWLTSNTFSLVQSVVLKMPTFRKSFGIPV 426
            AA  A+ A   +EA+      S  +LG    ++A++ +D I STTG+P+WA+I+  TV +R+   P+ VV+ RN+A+M L +P+ + LK  ++  N T ++     ++ + KAL +K+ V   + +  P+ QIP F+ F++ L+ +S+ FP YA  G  W  DL AADPY VLP LS+   +  +E G D M +G M   ++  MR    ++VP+T+N  +G F+YW+TSN F++ QS +L++   +++  IPV
Sbjct:   71 AASPAEVADQALEAASTIDYASVSDLGFGLSDLAIRSLDVIHSTTGLPWWATIIATTVAVRTVFFPITVVSMRNAAKMKLFQPDMEKLKAEID-SNPTQNSETAQEFQKKYKALMKKHGVNPFKSVLTPMSQIPVFLGFFWGLQDISKYFPEYAHEGIGWVSDLSAADPYMVLPILSSALMIASVELGGDAM-AGEMKDKLKFGMRFFAAIMVPLTMNFQSGIFVYWVTSNAFTVAQSALLRVNLIKRALNIPV 322          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2220.5895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ1_ECTSI2.960e-6540.32Oxa1 or Cox18/Oxa2 homolog, mitochondrial integral... [more]
A0A6H5J862_9PHAE1.360e-6340.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RKG9_9STRA5.120e-4938.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SHT9_9ARCH1.110e-4839.53YidC/Oxa1 family membrane protein insertase n=1 Ta... [more]
A0A067C4W9_SAPPC5.720e-4638.30Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024U946_9STRA1.460e-4434.72Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9ZCP9_9STRA6.250e-4437.34Mitochondrial inner membrane protein OXA1 n=1 Tax=... [more]
A0A1V9YQZ6_9STRA6.810e-4436.84Mitochondrial inner membrane protein OXA1 n=1 Tax=... [more]
W4FLF9_9STRA7.560e-4434.35Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A6A3UNJ7_9STRA9.470e-4236.61Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 221..414
e-value: 2.3E-26
score: 92.7
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 156..432
IPR028055Membrane insertase YidC/Oxa1, C-terminalTIGRFAMTIGR03592TIGR03592coord: 221..413
e-value: 2.4E-27
score: 94.2
NoneNo IPR availablePANTHERPTHR12428:SF17MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1Lcoord: 156..432
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 401..537
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 359..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..244
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 379..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 297..315
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 245..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 342..358
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 316..341
NoneNo IPR availableTMHMMTMhelixcoord: 336..358
NoneNo IPR availableTMHMMTMhelixcoord: 294..316
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 379..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2220contigH-paniculata_contig2220:10058..20178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2220.5895.1mRNA_H-paniculata_contig2220.5895.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2220 9260..20201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2220.5895.1 ID=prot_H-paniculata_contig2220.5895.1|Name=mRNA_H-paniculata_contig2220.5895.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=538bp
MLRAGQSSAARAVFYRAGAAHEGRSARFSVFARASSATRHSVPNNFNNAS
CGSSGSRPGRVGDLSVSNSRLGGRRVAVIAQRIRAVATTAGGRLAGGGAY
PLSCTPLNSSLPCAGFAYWRCAAFRSRGMSASASSAGGQATGSGGTGAAA
AAAAGGSTSSSGGSVAVDGVTSAASSAAGTAQQAQPMIEASVPSAVELGL
YPVEIAMQVIDGIASTTGMPYWASIVLITVMLRSAMLPLAVVTTRNSARM
GLMKPEQDALKEALERDNVTPSNRKHLRYRAESKALFQKYDVKLSRGLWF
PLVQIPFFMSFWFALRRMSEQFPAYASGGAAWFQDLGAADPYAVLPTLSA
LSFLLMLEKGSDGMNSGMMSPNIRLAMRGVTLLIVPITINLPAGTFMYWL
TSNTFSLVQSVVLKMPTFRKSFGIPVVPKEPPPGADGKELTWMAVLGAPN
PFKAHKMMLDQQAANSHSIVGGGDLGPVPKNAPLPPPPPVTRDMEAPKLK
TAAASGSMGKGGVVGQSSKPRKGGGNDFKRKKGKQRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18
IPR028055Membr_insert_YidC/Oxa1_C