prot_H-paniculata_contig22198.5892.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22198.5892.1
Unique Nameprot_H-paniculata_contig22198.5892.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length348
Homology
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BLAST of mRNA_H-paniculata_contig22198.5892.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.250e-49
Identity = 126/302 (41.72%), Postives = 154/302 (50.99%), Query Frame = 0 
Query:   41 ATLAGIDDCIRQWKAARHSGQAVLTSLSNTLLLRTHLDKGRNIPTITPDYSGKGGMGEANAESVWGVLAGAAGGSTVARVSVASEARVRRLHYELTSLQDAMLAAAGGLRRHASDARRLHFSLAPDVSTTCKAMPGAAAVAVGVTSAAEADQSXXXGGGIPAGHREQHIAGVESGQSPVSRSLAELAELVSLLSLSENTSDRRVRIEGDDSDGDEERGCSSFVGWGYGVGDVADSAADVADMLMKEALVTATITQGVTELVSRGDRDALTIYAAAWMMQPYLDARRMKELQKMAGA-GKGAR 341
            ATL  ID C+R+WKAARH GQAVLT LSN LLLRT++DKG                  A   +VWG LAGA  G+TV+RVSVA+E R RRLH +L++LQDAM+AAAG LRRHA + RR   S                                       AG  +   +G  SG                                             + VG GY + DVAD+ + VA+MLMKEALVTAT+ QGV +   R DR+ALT+YAAAWMMQPY+DA R+KEL+ M G  G+G R
Sbjct:   25 ATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGXXXXXXXR---------AATDGAVWGALAGA--GTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVS-------------------------------------ARAGGEDHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQGRGKR 266
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BLAST of mRNA_H-paniculata_contig22198.5892.1 vs. uniprot
Match: A0A835ZE08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE08_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.110e-5
Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 0 
Query:  264 GW---GYGVGDVADSAADVADMLMKEALVTATITQGVTELVSRGDRDALTIYAAAWMMQPYLDARRMKELQKMAGAGKGAR 341
            GW   GY   D+A +A  +  ML +E  V   +     +  SR   D LT+YAAAWMMQPY++    K+L +M   GK  R
Sbjct:  112 GWHNGGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSSR---DTLTLYAAAWMMQPYMERGLWKDLLRMTETGKPGR 189
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22198.5892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI1.250e-4941.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZE08_9STRA3.110e-539.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22198contigH-paniculata_contig22198:1210..2253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22198.5892.1mRNA_H-paniculata_contig22198.5892.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22198 693..3322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22198.5892.1 ID=prot_H-paniculata_contig22198.5892.1|Name=mRNA_H-paniculata_contig22198.5892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=348bp
MTSSVDTPKVRASPSTSATPSITTPDKPAKLKNANSSSLSATLAGIDDCI
RQWKAARHSGQAVLTSLSNTLLLRTHLDKGRNIPTITPDYSGKGGMGEAN
AESVWGVLAGAAGGSTVARVSVASEARVRRLHYELTSLQDAMLAAAGGLR
RHASDARRLHFSLAPDVSTTCKAMPGAAAVAVGVTSAAEADQSGSGGGGI
PAGHREQHIAGVESGQSPVSRSLAELAELVSLLSLSENTSDRRVRIEGDD
SDGDEERGCSSFVGWGYGVGDVADSAADVADMLMKEALVTATITQGVTEL
VSRGDRDALTIYAAAWMMQPYLDARRMKELQKMAGAGKGARPKGVSR*
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