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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2063 |
| Cds size | 1239 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2219.5889.1 >prot_H-paniculata_contig2219.5889.1 ID=prot_H-paniculata_contig2219.5889.1|Name=mRNA_H-paniculata_contig2219.5889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=413bp
MPVGDTSPAPETNPASATSGDDGDDGDGVSAGADTGVSSSEADGSDGAKD
KLAPLDVNHGDKETWKRLGKKEEEEEPSVASCAMTTAISYSSSSRSVALS
SIGTISQPVTTTRVVNVSTDRHEDVGEVVDQPTSTARTRDPTGEAPDSPS
GMGQGEREVWGASLGRQSDRLSLTSSSTSVGARQEWPPSLDADILPGGQE
WREGAALMYHPVVELENNQCSSSSSSNSSVVDLLNVRRGFRGAGAVAPAM
ASAVFSDSVGWTGKTPRSGSHEIGSLSLSMEEADDGDGAGDPAPMPSLSL
RGRIFSGGGADGRSRWPAPGSDTDTSTERKARAAFSNPLFTRHHPRRGRG
RISTDGAGPSSANFSVASPDRMLSEDIATALAEATASVCHPHDSYDGRGG
DDNDGRFNVRNWQ back to topmRNA from alignment at H-paniculata_contig2219:6109..12288- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2219.5889.1 ID=mRNA_H-paniculata_contig2219.5889.1|Name=mRNA_H-paniculata_contig2219.5889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6180bp|location=Sequence derived from alignment at H-paniculata_contig2219:6109..12288- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTCGGGTAGTTCACGTCACCAATTTGCCATCTTTTCTCCGGGTCGA
CACCCCGGCGAGGGACCGAGCCCAGGAACAGGGCAGAAACAAGGGCTCTA
CAGCGACATGCAGGAGCCGGGCTTCCCGACCGAGGAGTTCGTGGCAGCCA
CTTACGCGGCTAATTCCGCGGTGTCGGCTGCTACGAAGCGGCAGGCTAAG
CTGGCCGCGGCTCGAGCAAAGCACAATACTGTGAAACAACAGGCCGGATA
TAGTGGCGCCGGGGGGGGGCGCGGTCGGACCGCCGAGGTGGCTGATAGCG
AACCGGGTCTCGGGGGGCCTTTGGTAGGAGAAGACCGGGAGCGAGAAGGG
CGGAGCAGTAGCAGATCGAGGTTAGAGGCGGCTCGCGTGAGACATGAAGC
TGCGAAGCGCCAGGCTGCATGCCTAAATGGGGCTGAAGGAGGTGTCTCCG
TCGTGGAGGATAGTGACCGGAAGTATGGCAAGGACGGTGACGATGGTGAC
AACGATGGTCTTGAAGAAAAAGCACAGGAACATCGACGTACGGAAGTAAA
AGAAGCAGCAGCAGCAGCAGCAGATACCACTTCAGGTGGTACACGAGAGG
ACAGGATTGGTGCCTTTCATTCTCCTACCCTGGACGTTGCTGATATCAAT
GACGACGACGGCTACGTTGGTAACAGCGATGGTATCATCAATATTCACGG
CAAGGTTACTGATACCGATACCGAAGAACCTAGATTAGGCATTACCGGGA
CCCTGAGTCCCAGAAACCAGGCGAACGAAAATGATCCCGTCGCGGCTCCC
TCGGCTGCCGCCAGTTCGACCGAAACCGATTCTGGGGTGGACGCACCGAT
GCCAGTTGGCGACACCTCTCCAGCGCCCGAGACAAACCCAGCATCTGCCA
CGTCCGGCGATGATGGTGACGATGGCGATGGCGTAAGCGCTGGTGCTGAC
ACGGGTGTTTCCTCGAGCGAGGCTGATGGGAGTGATGGAGCGAAGGACAA
ATTAGCCCCGTTAGACGTGAACCATGGCGATAAGGAAACGTGGAAACGTT
TGGGTAAAAAAGAAGAAGAAGAAGAACCTTCTGTGGCGTCTTGTGCCATG
ACGACAGCCATTTCCTATAGCAGCAGCAGCAGAAGTGTCGCGTTGTCGTC
CATTGGAACGATCAGTCAACCCGTAACGACCACTCGTGTTGTGAATGTGT
CTACCGACCGGCACGAGGATGTTGGTGAGGTTGTTGACCAGCCCACTAGC
ACCGCCAGAACACGCGATCCTACGGGGGAGGCACCCGATTCCCCCAGTGG
GATGGGCCAAGGGGAGCGTGAGGTGTGGGGGGCATCTTTGGGCAGGCAGA
GTGACCGTCTCAGCTTGACCTCGTCATCTACCTCGGTGGGGGCTCGTCAA
GAGTGGCCACCTTCTTTGGATGCAGACATACTACCAGGTGAGAGTGATTT
GGGACTTTTTGCGTTCGCACCGGAAAGTTCCTATGACTGTTCATTAATTT
TGGTGCTTGCTTGTTGATGGTCATTATCTTGTTTTTTATTTCAATTAATA
TGTACATATATGGAGTGTGTATATATCGTATTCATGGTATGATGATGATG
ATTTCGATGATAGTGCCGCGCGACACTGGCGTGGCTGTGGCTGCCGCATA
CTCGTACGACGAAAAAAGAGGCAAACTTGTATATTTGAACCTTTTTTCAA
ATATACAACGATAAACGCGTCAAAATTTGGGTGATTGTGCAAAACGAGTT
CCTTTTTACAAATGTTAAAAATTTGGTCGTGTATCGTCACCAGTGAACGC
CTCGTCACGGACTCCAATCCGTTTAGCCCAACGTCTTGTTGCAAAACGAA
GAGGTTTCCGCAACAAGTGACTATTCATTCGTATCACTGACGGAATATAC
GAATTTCGAAAAAGAAAGTAATTTCGTAACGAGAGAGATGTTGGTGTGAG
TGAGCCTGGGGTCGGGACAGGGTCCGCCATAAGCAGCTCACTGTCACCTA
TATACTATATACTATATTGCAAAGGAAATTGTTTTGCGCAAATATCGCAA
TTTTGACGTGTTTGCCGGTGTGATGAATATTGTTTTCAAGTGAACAACTT
TGCCTCTTTTTCCGTCGTACGGGGGGGTATCCAGGCAGCCACAGCAACGC
CGGCGTCACACGGCACTGTGAGGAATAATATAGAAACTGTCGCAAGAGCA
ACGTCATCGACATCATGATCACCATCATTATCATCATAGTGTATCGTAAT
TACCCTTCCCCTACGTCTATTGCCCATCGAACTACAATCACGTCAACGAC
ACGAGAAAAAGACGCAGATGAAAGGACGTGATGACGGAGATGAGGAGCCG
CCGCTGTTGAAACAGTCAGTTCATTTCAGAACGTACATGAAGCAAAAGAC
GTGTAGGTAGTGAAATTTTGCCCGCAACCATTGTGCAGCAAGCACGTGAC
ATATAGTTTCAGATATACCATGTTTCTTGTGAAACTGCATCCGGAGGGTA
AAAAAAAGGTTGGTTGATTCCACTGTCAAAATGTATTTTTGTTTTGTTTT
GTTCTCCCTCTTTTTGCTCATCAGTATATTCAGTTACGAGTATGGAGGCG
CTTAAACATGTCCGATTTCATTTTTGAAAAAAAAACACAAGGAATTGTAC
ATGGTTTTTTTGAGTTGAACTGCAATTTTTTTAGTCAAATAGTTAGTTTT
GCCTCTCGACACCAAAACACACGCAGTGAAAAAAAGGCACTCGATCGAAA
AACGCACCAATTGCGCACGTGAGGGTTTTTTAGTCGTTTTTAGTTCTATG
GGAAGTAGTACCAAATATGAGCTATTTTCCAGCCGAGTAGTTTTTCTCGC
GGCGCGTGTTTTAGTGTTAAAAAAGTCAACATGTACAATTCAACTGAGAA
AAAAAAATCGTAGATATTTACGTGCCTTTATAATCATAACTGAGTATACA
TACTTATGAGAGACCAAGTATGTTATTGTCATGAATGTGTCATTATCCAT
TTTCCTGGGGGACAAAAATGGTGTCATGAAGATGAGTCTTAACGCTCCAT
GGACTTGAAGCGTAGGGAGTCGTTTGGTGTCTTCGCTACGGATGATTCGA
GATACTAAAGAAATCTGTGTCTTCCTGATGTAGGGCATGGAGCCACTGGT
GTGGTCGCTGTCCTGATATGGTACCTACTGTACTGTCAAGTCAAGATTTC
TGCTTTTCACCGCCGCATGTATAATTCATCATCAAAGTGTGTGTGTGTGT
ATGTGCTTTTTCAGGCCGCTGGTTTAGCTGTCGCTTGCCTATTACGGAGG
AGCATAATGATCAGGAGCAAAAAATTAGAAAATTGACATTTTGAGGTGTA
ACTCATGCAATACGATATGCACCAATCGGTTGCTGCATGCCTGTGCAAGT
GTTTTTAGAGTGCGTTTTGTTCTCAGCTAGAAGCGAAAATCTCTAGACGA
AGGAGAAAACCCCCCAAAAAAACAGTTTCCGAAAAACCAAAAAAAAGGCT
CCTGATTATTATGTTCCTCCGTAATAGTGATATTGCTTGCTAAAGAAGTA
CAGTAAACGGCAGTTTTATGAATACTGGCAGAACATTACTTCTCACTACC
TATGGTCATTATCCATCCATCCTCCGACGACCGGCAGGCGGGCAGGAATG
GAGAGAAGGCGCCGCGCTCATGTATCACCCCGTGGTAGAACTGGAAAATA
ATCAATGCAGCAGCAGCAGCTCCAGCAACAGTAGCGTCGTTGACCTGCTA
AATGTACGAAGAGGCTTCCGCGGAGCGGGAGCAGTGGCTCCAGCAATGGC
TTCTGCTGTGTTCTCGGACAGTGTGGGCTGGACCGGCAAGACGCCACGGT
CGGGCTCCCACGAGATAGGGTCATTGTCGTTGTCGATGGAGGAGGCAGAC
GATGGGGATGGTGCTGGTGACCCTGCTCCAATGCCATCGTTATCTCTTCG
TGGACGAATATTTTCTGGAGGCGGTGCTGACGGCCGTTCTCGTTGGCCTG
CTCCCGGTGAGTTGGTAATTTTTTTTATGGCATGCTCATACCAGCACTAT
GTGTGTATATATGAGGGTCTTGTGTTGTGTTGTGTTGAAAGAAACGCGTT
TTTTATTTTTGATGATGTTGGTTTTTATATTTTTGATGGAACGTTGTGAT
ACTTGACACTTGTATAATGACGAAAAGTGAATGAGTGGAGCATATTTATC
GCGAAATGCCGAGAATATTGGCATATTTATGACACATTTTCAAGAATTAA
AGCTCTTTTATGACGCGTAATTCTTTTTTCGGAAGTTAGAACGACGGGTT
TTACGCTTCGACGAAGAACGCAAAAATATGAGACGTTTTTATGACAAATG
ACATATGAACATGATTAGCATCTATATATGTATAGAATTTACTATGGAGT
TTTTTTTTGTACCAGAGAACATGGATGAGTTAGCTTCCTCTTTTTTCTTC
TTTTTTTTTCTTCTTTTTTTCTTTGGTCAACCCGTTGGTCACAATGTCGC
AATGATATCAGAAGGCACAGAATTGGTAGCCGGACCTTGTAGCCGGTATG
GGCTTGTCTTGCTTTGTTTACGGTTTCACGTTTATCGCCATATGGATCTG
TCCTCGTGCACTAGTAAACTCTGTGACTTTGCGTGCAGGTGAGTTTTTTT
TTTTTTTTTAACCCCCGAAAGGCTAAGGCAAAAAACTTTATCCGATGCTT
CCATACTTGAGTATTTATACCGAAGTATGCCTACATTTCCTTTAACAGAA
CAGAGTTATTTGTTCCTCTGCGGGGTAGGCGCCACCCCGGTTCGGCTGAA
CCAGGTAGGCAGTATGAGGGTTGCACCCACTTAAAAGACCTCTGACTAGA
CTTCCAGTCATGCTCACTTCACGAGCTACCCTACCCGTTCGGGCGCAGGT
CCGTGGAGGTGAGGTTTACTGAGGGCGGTGATAGATTTTTCATCGTGCAG
AACACGATAGCACGCGAGAAATTTGATGTCACGGAGTTTAGAGTCAATTT
TGTTAATTGGCTGAGATTTTTTGCGTGAAACAAAAAACGCAGCTTGCTGA
AATTGGGCCGCCAAATTCGTTACTGTAGTAAAATCCTTTGGACTGATTAT
TAAGAAATTCTTGTTTCGGGTTTCAGGAGGGCCATAAGAATGTCGCCAAT
GATCGTTTGTTCTTTTGTTTTTCGTCATCGGGATTGGATTCGAACTCACG
ACCTTATGATCCCGTCGTCAGGTCTCCTACCGGCGACGCCACTGTGACGG
GAGGGTTTGTTCTTTTGTCATACAGACGCTTATGGCAATTATGGGTGTCT
CTTTGTCCACTGTAAGACTTGTTCGCTGTGTCTTTACGGTCCTACGCAGG
CAAGGAAGAACATCGATACTGCTGCCGCGAACTCAAGATGCCTACCCGAC
GTTTGCATAGTGCAAAATATCTCGAGTGTGTTGGTGAAAAATGTTCTCAT
CTTGTTCGTTTCCTGTGGACACCGTGATGAGTATGGTATTATCTCATATG
AAACAGCTATTGTGCATTTTTGCTAACTCGGTGTGATGAATCCGCGAGGT
CTGGCATCGCTGCATCGTTACATCTGTACGTACGTGTGGGGAGAGAGCCT
GGACCCATGTTTCTTTTGTTTCTGTGAGATAATCAAATGTGACCATGAAC
AGCGGCCGCGCCGTTGTATTTACTTATTATGTATGACGGAATAGTTCTTT
TGGCCTTTTGTAAACATAGATTTTCATGGTCTATTGCTACTGTACAGTGG
GGGATTCATTATAAACCAGAAAACCGCAATATACAGACCACCACTTCACA
GGTGAGAGCAACTCCAGCGTTTTGTTTACTGTGCTGGTGCGAGTTTTATC
GTCGCCACCTTCATGGCCACCTGTTCGTTCTCACACGTGTTTTTTTCAGG
CAGCGATACCGATACCTCTACAGAGAGAAAAGCACGAGCTGCCTTCAGCA
ATCCCTTGTTCACGAGGCATCACCCACGGCGGGGTCGCGGCAGAATAAGC
ACCGATGGAGCAGGCCCATCATCTGCTAACTTCAGCGTGGCCTCTCCAGA
CCGCATGCTGTCGGAGGATATAGCCACTGCGTTGGCTGAAGCCACCGCCT
CGGTCTGTCACCCCCACGACTCGTATGATGGCCGCGGTGGCGACGACAAC
GACGGCCGATTTAACGTTCGCAATTGGCAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2219:6109..12288- >mRNA_H-paniculata_contig2219.5889.1 ID=mRNA_H-paniculata_contig2219.5889.1|Name=mRNA_H-paniculata_contig2219.5889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2478bp|location=Sequence derived from alignment at H-paniculata_contig2219:6109..12288- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCAGTTGGCGACACCTCTCCAGCGCCCGAGACAAACCCAGCATCTGC
CACGTCCGGCGATGATGGTGACGATGGCGATGGCGTAAGCGCTGGTGCTG
ACACGGGTGTTTCCTCGAGCGAGGCTGATGGGAGTGATGGAGCGAAGGAC
AAATTAGCCCCGTTAGACGTGAACCATGGCGATAAGGAAACGTGGAAACG
TTTGGGTAAAAAAGAAGAAGAAGAAGAACCTTCTGTGGCGTCTTGTGCCA
TGACGACAGCCATTTCCTATAGCAGCAGCAGCAGAAGTGTCGCGTTGTCG
TCCATTGGAACGATCAGTCAACCCGTAACGACCACTCGTGTTGTGAATGT
GTCTACCGACCGGCACGAGGATGTTGGTGAGGTTGTTGACCAGCCCACTA
GCACCGCCAGAACACGCGATCCTACGGGGGAGGCACCCGATTCCCCCAGT
GGGATGGGCCAAGGGGAGCGTGAGGTGTGGGGGGCATCTTTGGGCAGGCA
GAGTGACCGTCTCAGCTTGACCTCGTCATCTACCTCGGTGGGGGCTCGTC
AAGAGTGGCCACCTTCTTTGGATGCAGACATACTACCAGATGCCAGTTGG
CGACACCTCTCCAGCGCCCGAGACAAACCCAGCATCTGCCACGTCCGGCG
ATGATGGTGACGATGGCGATGGCGTAAGCGCTGGTGCTGACACGGGTGTT
TCCTCGAGCGAGGCTGATGGGAGTGATGGAGCGAAGGACAAATTAGCCCC
GTTAGACGTGAACCATGGCGATAAGGAAACGTGGAAACGTTTGGGTAAAA
AAGAAGAAGAAGAAGAACCTTCTGTGGCGTCTTGTGCCATGACGACAGCC
ATTTCCTATAGCAGCAGCAGCAGAAGTGTCGCGTTGTCGTCCATTGGAAC
GATCAGTCAACCCGTAACGACCACTCGTGTTGTGAATGTGTCTACCGACC
GGCACGAGGATGTTGGTGAGGTTGTTGACCAGCCCACTAGCACCGCCAGA
ACACGCGATCCTACGGGGGAGGCACCCGATTCCCCCAGTGGGATGGGCCA
AGGGGAGCGTGAGGTGTGGGGGGCATCTTTGGGCAGGCAGAGTGACCGTC
TCAGCTTGACCTCGTCATCTACCTCGGTGGGGGCTCGTCAAGAGTGGCCA
CCTTCTTTGGATGCAGACATACTACCAGGCGGGCAGGAATGGAGAGAAGG
CGCCGCGCTCATGTATCACCCCGTGGTAGAACTGGAAAATAATCAATGCA
GCAGCAGCAGCTCCAGCAACAGTAGCGTCGTTGACCTGCTAAATGTACGA
AGAGGCTTCCGCGGAGCGGGAGCAGTGGCTCCAGCAATGGCTTCTGCTGT
GTTCTCGGACAGTGTGGGCTGGACCGGCAAGACGCCACGGTCGGGCTCCC
ACGAGATAGGGTCATTGTCGTTGTCGATGGAGGAGGCAGACGATGGGGAT
GGTGCTGGTGACCCTGCTCCAATGCCATCGTTATCTCTTCGTGGACGAAT
ATTTTCTGGAGGCGGTGCTGACGGCCGTTCTCGTTGGCCTGCTCCCGGCG
GGCAGGAATGGAGAGAAGGCGCCGCGCTCATGTATCACCCCGTGGTAGAA
CTGGAAAATAATCAATGCAGCAGCAGCAGCTCCAGCAACAGTAGCGTCGT
TGACCTGCTAAATGTACGAAGAGGCTTCCGCGGAGCGGGAGCAGTGGCTC
CAGCAATGGCTTCTGCTGTGTTCTCGGACAGTGTGGGCTGGACCGGCAAG
ACGCCACGGTCGGGCTCCCACGAGATAGGGTCATTGTCGTTGTCGATGGA
GGAGGCAGACGATGGGGATGGTGCTGGTGACCCTGCTCCAATGCCATCGT
TATCTCTTCGTGGACGAATATTTTCTGGAGGCGGTGCTGACGGCCGTTCT
CGTTGGCCTGCTCCCGGCAGCGATACCGATACCTCTACAGAGAGAAAAGC
ACGAGCTGCCTTCAGCAATCCCTTGTTCACGAGGCATCACCCACGGCGGG
GTCGCGGCAGAATAAGCACCGATGGAGCAGGCCCATCATCTGCTAACTTC
AGCGTGGCCTCTCCAGACCGCATGCTGTCGGAGGATATAGCCACTGCGTT
GGCTGAAGCCACCGCCTCGGTCTGTCACCCCCACGACTCGTATGATGGCC
GCGGTGGCGACGACAACGACGGCCGATTTAACGTTCGCAATTGGCAGGCA
GCGATACCGATACCTCTACAGAGAGAAAAGCACGAGCTGCCTTCAGCAAT
CCCTTGTTCACGAGGCATCACCCACGGCGGGGTCGCGGCAGAATAAGCAC
CGATGGAGCAGGCCCATCATCTGCTAACTTCAGCGTGGCCTCTCCAGACC
GCATGCTGTCGGAGGATATAGCCACTGCGTTGGCTGAAGCCACCGCCTCG
GTCTGTCACCCCCACGACTCGTATGATGGCCGCGGTGGCGACGACAACGA
CGGCCGATTTAACGTTCGCAATTGGCAG back to top
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