prot_H-paniculata_contig22177.5881.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22177.5881.1
Unique Nameprot_H-paniculata_contig22177.5881.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length54
Homology
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BLAST of mRNA_H-paniculata_contig22177.5881.1 vs. uniprot
Match: D7FXL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL1_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 7.990e-17
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0 
Query:    1 GAELVVIQGVLQGNVQAVCVDIERGAQVKGTVECEAARVNGAFHGELVSSQSLH 54
            GAELVVI+G  +G V A C+DIE+GA+V+GT+ECEAARVNG F G  +SS SLH
Sbjct:   49 GAELVVIRGCFEGKVTAQCIDIEQGAEVRGTIECEAARVNGKFDGVFMSSHSLH 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22177.5881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXL1_ECTSI7.990e-1766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 5..52
e-value: 3.8E-8
score: 33.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22177contigH-paniculata_contig22177:2135..2296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22177.5881.1mRNA_H-paniculata_contig22177.5881.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22177 2135..2296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22177.5881.1 ID=prot_H-paniculata_contig22177.5881.1|Name=mRNA_H-paniculata_contig22177.5881.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
GAELVVIQGVLQGNVQAVCVDIERGAQVKGTVECEAARVNGAFHGELVSS
QSLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B