prot_H-paniculata_contig22161.5874.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22161.5874.1
Unique Nameprot_H-paniculata_contig22161.5874.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: D8LEK3_ECTSI (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK3_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 2.540e-107
Identity = 167/188 (88.83%), Postives = 175/188 (93.09%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSG 188
            QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAE+SSAGNTYATTGGQFDMPMT+IGAGGTAPNQSLGAEHSQ          PFHAYVMGIPGLKICTA+SPEAAYGITKSMIRDNGPGILFCPVKMMKGVKG L+LG+CLP+NKAAVLHAAS +AV+ G
Sbjct:  504 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQSLGAEHSQ----------PFHAYVMGIPGLKICTAASPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGELELGKCLPMNKAAVLHAASEDAVAKG 681          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: B8C5P9_THAPS (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5P9_THAPS)

HSP 1 Score: 299 bits (766), Expect = 1.260e-99
Identity = 149/188 (79.26%), Postives = 163/188 (86.70%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSG 188
            QAGSSYDIPK  Q+ +G +RAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGI+GMAE+SSAGNT+ATTGGQFDMPMT++GAGGTAPNQ+LGAEHSQ          PFHAYVMGIPGLKICTA+SP+AAYGITKSMIRDNGP  LF PVKMMK  KGTLDL  C PLNKAA+LH AS E+V+SG
Sbjct:   15 QAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIFGMAELSSAGNTFATTGGQFDMPMTIVGAGGTAPNQALGAEHSQ----------PFHAYVMGIPGLKICTAASPDAAYGITKSMIRDNGPCFLFAPVKMMKEAKGTLDLDVCAPLNKAALLHEASAESVASG 192          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A7S2KDP0_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KDP0_9STRA)

HSP 1 Score: 301 bits (772), Expect = 6.350e-99
Identity = 151/188 (80.32%), Postives = 164/188 (87.23%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSG 188
            QAGSSYDIPK  Q+ +G +RAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNT+ATTGGQFDMPMT+IGAGGTAPNQSLGAEHSQ          PFHAYVMGIPGLKICTA+SP AAYGITKSMIRDNGP  LF PVKMMK  KGT+DL +CLPLNKAA+LH AS ++V++G
Sbjct:  133 QAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTFATTGGQFDMPMTIIGAGGTAPNQSLGAEHSQ----------PFHAYVMGIPGLKICTAASPAAAYGITKSMIRDNGPCFLFAPVKMMKEAKGTVDLDRCLPLNKAALLHEASADSVAAG 310          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A7S1USZ6_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USZ6_9STRA)

HSP 1 Score: 300 bits (769), Expect = 4.260e-98
Identity = 149/189 (78.84%), Postives = 164/189 (86.77%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSGK 189
            QAGSSYDIPK  Q+ +G +RAADEIIDEGH IGKALGE MNGYRP+VELMNTNFGIYGMAE+SSAGNTYATTGGQFDMPMT+IGAGGTAPNQ+LGAEHSQ          PFHAYVMGIPGLKICTA+SP+AAYGITKSMIRDNGP  LF PVKMMK  KG +DLGQC+PLNKAA L+ AS++AV +GK
Sbjct:  162 QAGSSYDIPKLTQQTYGQIRAADEIIDEGHFIGKALGEAMNGYRPVVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ----------PFHAYVMGIPGLKICTAASPDAAYGITKSMIRDNGPCFLFAPVKMMKESKGPVDLGQCMPLNKAAFLNKASDDAVKAGK 340          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A7S1D9A9_CYCTE (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9A9_CYCTE)

HSP 1 Score: 294 bits (753), Expect = 1.440e-97
Identity = 146/188 (77.66%), Postives = 160/188 (85.11%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSG 188
            QAGSSYDIPK  Q+ +G +RAADEIIDEGH +GKALGE MNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMP+T+IGAGGTAPNQ+LGAEHSQ          PFHAYVMGIPGLKICTA+SPEAAYG+TKSMIRDNGP  LF PVKMMK  KG +DLG C+ LNKAA+LH AS  +V +G
Sbjct:   21 QAGSSYDIPKLTQQTYGQIRAADEIIDEGHFVGKALGEAMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ----------PFHAYVMGIPGLKICTAASPEAAYGLTKSMIRDNGPCFLFAPVKMMKESKGPVDLGNCMALNKAALLHEASQASVDAG 198          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A7S0ENF3_9CRYP (Pyruvate dehydrogenase E1 component subunit beta (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ENF3_9CRYP)

HSP 1 Score: 296 bits (758), Expect = 1.600e-97
Identity = 147/188 (78.19%), Postives = 161/188 (85.64%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSG 188
            QAGSSYDIPK  Q+ FG LRA+DEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAEISS GNTYATTGG F MP+T+IGAGGTAP QSLGAEHSQ          PFHAY+MGIPGLK+CTA+SPEAAYG+ KSMIRDNGPG+LFCPVKMMK VKG+  L +CLPLN+AA+LHAAS+ AV  G
Sbjct:   93 QAGSSYDIPKLTQQTFGKLRASDEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSCGNTYATTGGDFMMPVTIIGAGGTAPAQSLGAEHSQ----------PFHAYIMGIPGLKVCTAASPEAAYGLAKSMIRDNGPGMLFCPVKMMKDVKGSPQLDKCLPLNRAALLHAASDAAVKEG 270          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A836C8J1_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J1_9STRA)

HSP 1 Score: 304 bits (778), Expect = 2.040e-96
Identity = 152/189 (80.42%), Postives = 164/189 (86.77%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSGK 189
            QAGSSYDIPK  Q+ FG LRAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQF MPMT+IGAGGT+PNQSLGAEHSQ          P HAYVMGIPGLKICTASSP+AAYG+ KSMIRDNGPG+LF PVKMMK  KGT+D G+C+ LNKAAVLH+AS+ AV +GK
Sbjct:  433 QAGSSYDIPKLTQQTFGKLRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFIMPMTIIGAGGTSPNQSLGAEHSQ----------PLHAYVMGIPGLKICTASSPDAAYGLAKSMIRDNGPGMLFLPVKMMKSTKGTIDAGRCMQLNKAAVLHSASDAAVDAGK 611          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A7S4HES2_9EUKA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HES2_9EUKA)

HSP 1 Score: 295 bits (756), Expect = 4.020e-96
Identity = 146/189 (77.25%), Postives = 163/189 (86.24%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSGK 189
            QAGSSY+IPK  Q+ FG+LRAADEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYG+AE+SSAGNTYATTGGQF+MPMT++GAGGTAPNQ+LGAEHSQ          P HAYVMGIPGLKICTA+SPEAAYG+ K+MIRDNGPGILF PVKMMK  K  +D+G CLPLNK  VLHAAS+ +V +GK
Sbjct:  163 QAGSSYNIPKLTQQTFGTLRAADEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGIAEMSSAGNTYATTGGQFEMPMTILGAGGTAPNQALGAEHSQ----------PLHAYVMGIPGLKICTAASPEAAYGLAKAMIRDNGPGILFTPVKMMKEAKSFVDIGTCLPLNKVKVLHAASDASVKAGK 341          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: L1J1I5_GUITC (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J1I5_GUITC)

HSP 1 Score: 302 bits (774), Expect = 1.190e-95
Identity = 149/188 (79.26%), Postives = 164/188 (87.23%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSG 188
            QAGSSYDIPK  Q+ FG LRA+DEIIDEGH IGKALGEGMNGYRPIVELMNTNFGIYGMAEISS GNTYATTGG+FDMP+T+IGAGGTAP QSLGAEHSQ          PFHAY+MGIPGLK+CTA+SPEAAYG+ KSMIRDNGPG+LFCPVKMMK VKG+ +L +CLPLNKAA+LHAAS+ AV  G
Sbjct:  451 QAGSSYDIPKLTQQTFGKLRASDEIIDEGHFIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSCGNTYATTGGEFDMPVTIIGAGGTAPAQSLGAEHSQ----------PFHAYIMGIPGLKVCTAASPEAAYGLAKSMIRDNGPGMLFCPVKMMKDVKGSPELDKCLPLNKAALLHAASDAAVKEG 628          
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Match: A0A8J6CFX7_DIALT (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFX7_DIALT)

HSP 1 Score: 303 bits (775), Expect = 1.950e-95
Identity = 152/189 (80.42%), Postives = 165/189 (87.30%), Query Frame = 0
Query:    1 QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILFCPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSGK 189
            QAGSSYDIP   Q+ FG LRAADEIIDEGH +GKALGEG+NGYRPIVELMN+NFGIYGMAE+SSAGNTYATTGGQF MPMTVIGAGGTAPNQ+LGAEHSQ          PFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGP ILFCPVKMMK  KG + +G CLPLNKAA+LH AS++AV++GK
Sbjct:  491 QAGSSYDIPAFTQQTFGKLRAADEIIDEGHFMGKALGEGLNGYRPIVELMNSNFGIYGMAELSSAGNTYATTGGQFQMPMTVIGAGGTAPNQALGAEHSQ----------PFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPCILFCPVKMMKEAKGQVPVGTCLPLNKAALLHEASDKAVAAGK 669          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22161.5874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEK3_ECTSI2.540e-10788.83Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
B8C5P9_THAPS1.260e-9979.26Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2KDP0_9STRA6.350e-9980.32Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S1USZ6_9STRA4.260e-9878.84Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S1D9A9_CYCTE1.440e-9777.66Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S0ENF3_9CRYP1.600e-9778.19Pyruvate dehydrogenase E1 component subunit beta (... [more]
A0A836C8J1_9STRA2.040e-9680.42Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
A0A7S4HES2_9EUKA4.020e-9677.25Pyruvate dehydrogenase E1 component subunit beta n... [more]
L1J1I5_GUITC1.190e-9579.26Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A8J6CFX7_DIALT1.950e-9580.42Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 6..153
e-value: 3.4E-7
score: 30.1
NoneNo IPR availableGENE3D3.40.50.970coord: 1..169
e-value: 5.9E-28
score: 99.2
NoneNo IPR availablePANTHERPTHR11624:SF96PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATEDcoord: 1..179
IPR027110Pyruvate dehydrogenase E1 component subunit betaPANTHERPTHR11624DEHYDROGENASE RELATEDcoord: 1..179
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 4..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22161contigH-paniculata_contig22161:386..3777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22161.5874.1mRNA_H-paniculata_contig22161.5874.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22161 386..3777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22161.5874.1 ID=prot_H-paniculata_contig22161.5874.1|Name=mRNA_H-paniculata_contig22161.5874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
QAGSSYDIPKKLQEVFGSLRAADEIIDEGHIIGKALGEGMNGYRPIVELM
NTNFGIYGMAEISSAGNTYATTGGQFDMPMTVIGAGGTAPNQSLGAEHSQ
ASRHMYHPSLPFHAYVMGIPGLKICTASSPEAAYGITKSMIRDNGPGILF
CPVKMMKGVKGTLDLGQCLPLNKAAVLHAASNEAVSSGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR027110PDHB
IPR029061THDP-binding