prot_H-paniculata_contig22159.5872.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22159.5872.1
Unique Nameprot_H-paniculata_contig22159.5872.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
BLAST of mRNA_H-paniculata_contig22159.5872.1 vs. uniprot
Match: D7FL06_ECTSI (TLDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL06_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 5.210e-22
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 MGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFKCLNVEVWMFAD 50
            MGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFF+CL VEVW F++
Sbjct:  715 MGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFRCLQVEVWFFSN 764          
BLAST of mRNA_H-paniculata_contig22159.5872.1 vs. uniprot
Match: A0A482RX24_9ARCH (TLDc domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX24_9ARCH)

HSP 1 Score: 77.0 bits (188), Expect = 4.150e-15
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFKCLNVEVWM 47
            MGGGG GFA QIDDELD G SN SDT+ +P LSSNEFFKCLNVEVW+
Sbjct:  507 MGGGGEGFAIQIDDELDTGVSNHSDTYDNPTLSSNEFFKCLNVEVWV 553          
BLAST of mRNA_H-paniculata_contig22159.5872.1 vs. uniprot
Match: W7U6I5_9STRA (Oxidation resistance protein 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6I5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.160e-14
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    3 GGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFKCLNVEVWMFAD 50
            GGGGGFAFQ+DDELD G S PSDT+G+ RLSS   FKCL++EVW F D
Sbjct:  232 GGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGD 279          
BLAST of mRNA_H-paniculata_contig22159.5872.1 vs. uniprot
Match: A0A4D9DA04_9STRA (TLDc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA04_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.700e-14
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    3 GGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFKCLNVEVWMFAD 50
            GGGGGFAFQ+DDELD G S PSDT+G+ RLSS   FKCL++EVW F D
Sbjct:  499 GGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGD 546          
BLAST of mRNA_H-paniculata_contig22159.5872.1 vs. uniprot
Match: A0A7S3LZX6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZX6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.400e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 MGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFKCLNVEVWM 47
            MGGGG G+A Q+DDELD G SN SDTF +  LSS+EFFKCLNVEVWM
Sbjct:  304 MGGGGEGYAIQLDDELDTGVSNKSDTFNNNVLSSSEFFKCLNVEVWM 350          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22159.5872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FL06_ECTSI5.210e-2290.00TLDc domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A482RX24_9ARCH4.150e-1578.72TLDc domain-containing protein n=1 Tax=archaeon Ta... [more]
W7U6I5_9STRA1.160e-1470.83Oxidation resistance protein 1 n=1 Tax=Nannochloro... [more]
A0A4D9DA04_9STRA2.700e-1470.83TLDc domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S3LZX6_9STRA1.400e-1374.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006571TLDc domainPFAMPF07534TLDcoord: 1..48
e-value: 7.7E-10
score: 39.1
NoneNo IPR availablePANTHERPTHR23354NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATEDcoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22159contigH-paniculata_contig22159:1815..3384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22159.5872.1mRNA_H-paniculata_contig22159.5872.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22159 930..3511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22159.5872.1 ID=prot_H-paniculata_contig22159.5872.1|Name=mRNA_H-paniculata_contig22159.5872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MGGGGGGFAFQIDDELDAGESNPSDTFGSPRLSSNEFFKCLNVEVWMFAD
RTVDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom