mRNA_H-paniculata_contig1090.587.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A0S2G6C4_9GAMM (Copper-translocating P-type ATPase n=4 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A0S2G6C4_9GAMM) HSP 1 Score: 60.8 bits (146), Expect = 1.550e-7 Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 235 EICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGT 378 EI L + G+ CGSCV ++E+AL +V G LEASVNLAT QARV V GT Sbjct: 60 EIALRLQGMNCGSCVGRIEKALKAVPGVLEASVNLATEQARVRVVAGT 107
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A2D8RE92_9GAMM (Copper-translocating P-type ATPase n=1 Tax=Hahellaceae bacterium TaxID=2048971 RepID=A0A2D8RE92_9GAMM) HSP 1 Score: 59.7 bits (143), Expect = 3.890e-7 Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 244 LDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGTSGGESSTRGLSLSQDIRKVAESAGFP-SVVLWQKRNGG 489 LDVSGL C SCV ++E+ALL+++G + ASVNLAT AR V GG S L+Q +RK A P SV L R+ G Sbjct: 95 LDVSGLSCASCVGRVEKALLALEGVVSASVNLATESARATVL----GGSVSLN--ELAQAVRKAGYGAELPASVQLQSSRDEG 171
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: UPI00054F7CD4 (heavy metal translocating P-type ATPase n=1 Tax=Noviherbaspirillum massiliense TaxID=1465823 RepID=UPI00054F7CD4) HSP 1 Score: 59.3 bits (142), Expect = 5.230e-7 Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 94 KLGRVQRRLLGEGDRSLNSWPKQLRFLASRRSGGG------DYSGRWLAHERTEICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVG 375 ++ + R + G S+N + +A R G G + +G LA R E+ L + G+ C SCV+++E+ALL VDG + ASVNLAT ARV V+ G Sbjct: 32 RVEKALRAIPGVSKASVNLGTESATVVADRNVGLGSIEQAVEKAGYSLA--RKELDLAIKGMSCASCVARVEKALLKVDGVISASVNLATESARVQVSPG 129
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A0M2V4N6_9GAMM (ATPase n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0M2V4N6_9GAMM) HSP 1 Score: 58.9 bits (141), Expect = 7.000e-7 Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1 Query: 232 TEICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARV 360 T+I L++SG+ CGSCVSK+E+ALL+V G ASVNLAT QA+V Sbjct: 2 TQITLNISGMHCGSCVSKVEKALLAVPGVQAASVNLATEQAQV 44
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: UPI000970FAA3 (heavy metal translocating P-type ATPase n=1 Tax=Herminiimonas arsenitoxidans TaxID=1809410 RepID=UPI000970FAA3) HSP 1 Score: 58.9 bits (141), Expect = 7.090e-7 Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 235 EICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGT 378 EI LD++G+ C SC S++E+ALL VDG ++AS+NLAT++A+V V GT Sbjct: 82 EITLDITGMTCASCSSRVEKALLKVDGVIDASINLATDRAQVRVNSGT 129
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A8J2UMI6_9BURK (Copper-transporting ATPase n=2 Tax=Oxalicibacterium flavum TaxID=179467 RepID=A0A8J2UMI6_9BURK) HSP 1 Score: 58.9 bits (141), Expect = 7.110e-7 Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 232 TEICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGT 378 +EI L V G+ C SCV ++E+AL VDG L+ SVNLAT QARV +A GT Sbjct: 88 SEIDLAVGGMTCASCVGRVEKALRKVDGVLDVSVNLATEQARVKIAAGT 136
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A1G8YYS2_9RHOB (Cu+-exporting ATPase n=1 Tax=Meinhardsimonia xiamenensis TaxID=990712 RepID=A0A1G8YYS2_9RHOB) HSP 1 Score: 58.5 bits (140), Expect = 9.670e-7 Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1 Query: 232 TEICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGTSGGESSTRGLSLSQDIRKVAESAGFPS 459 TE LD+ G+ C SCV ++E+AL SV G +EASVNLA ARV GT + +I K A + G+P+ Sbjct: 72 TEAVLDIEGMSCASCVRRVEQALKSVPGVIEASVNLANESARVRYLAGT----------TTPAEIAKAAAAIGYPA 137
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A1Q4GS02_9PROT (Copper-translocating P-type ATPase n=1 Tax=Thiobacillus sp. 65-29 TaxID=1895862 RepID=A0A1Q4GS02_9PROT) HSP 1 Score: 57.8 bits (138), Expect = 1.760e-6 Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 94 KLGRVQRRLLGEGDRSLNSWPKQLRFLASRRSGGGDYSGRWLAHERT-------EICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGTS 381 +L +V R+L G D ++N L + SG + + A ER + L +SG+ C SC +++E+AL V G LEASVNLAT QA V VA+GTS Sbjct: 19 RLEKVLRQLPGVTDATVN-----LATETATVSGEAELAAVTQAIERAGFSVPMETLTLGISGMTCASCSTRVEKALNKVPGVLEASVNLATEQATVKVALGTS 116
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A023X4R0_9ACTN (Heavy metal translocating P-type ATPase n=1 Tax=Rubrobacter radiotolerans TaxID=42256 RepID=A0A023X4R0_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 2.430e-6 Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 1 Query: 187 SGGGDYSGRWLAHERTEICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGTSGGESSTRGLSLSQDIRKVAESAGF 453 + GG+ SG E L V G+ C SCVS++ERAL +V+G EASVNLAT +ARV++ G+ E + +R E AG+ Sbjct: 79 ASGGEASGGM------EASLAVEGMTCASCVSRVERALGAVEGVREASVNLATERARVVLEPGSGTDE---------EKLRSAVEGAGY 152
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Match: A0A7W5NSB0_9GAMM (Cu+-exporting ATPase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7W5NSB0_9GAMM) HSP 1 Score: 57.0 bits (136), Expect = 3.240e-6 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 235 EICLDVSGLRCGSCVSKLERALLSVDGALEASVNLATNQARVLVAVGTSGGESSTRGLSLSQDIRKVAESAGFPSVVLWQKRNGGDTKVV 504 EI L + G+ C SCVS++ERAL++V G +EASVNLAT QARV V + GE+ D+ +AG+ + R+G D V Sbjct: 82 EIELALQGMTCASCVSRIERALVAVPGVVEASVNLATEQARVRVT--SQAGEA---------DLVAAVAAAGYAATPHAAARSGTDAAQV 160 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1090.587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1090.587.1 >prot_H-paniculata_contig1090.587.1 ID=prot_H-paniculata_contig1090.587.1|Name=mRNA_H-paniculata_contig1090.587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp MLNVRGGRSRGSRLAHGLGVQRDDPPDVQAHKLGRVQRRLLGEGDRSLNSback to top mRNA from alignment at H-paniculata_contig1090:15495..19104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1090.587.1 ID=mRNA_H-paniculata_contig1090.587.1|Name=mRNA_H-paniculata_contig1090.587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3610bp|location=Sequence derived from alignment at H-paniculata_contig1090:15495..19104- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1090:15495..19104- >mRNA_H-paniculata_contig1090.587.1 ID=mRNA_H-paniculata_contig1090.587.1|Name=mRNA_H-paniculata_contig1090.587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig1090:15495..19104- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |