prot_H-paniculata_contig2215.5869.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2215.5869.1
Unique Nameprot_H-paniculata_contig2215.5869.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length172
Homology
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: D7G227_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G227_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 1.260e-71
Identity = 124/173 (71.68%), Postives = 145/173 (83.82%), Query Frame = 0
Query:    1 MAKEEKAKS--KSKKSKEA-VKDGDKVAAAPVPYDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAEWESL--ELFQKLTEVCTKEMSQVP 168
            M KE+KAKS  + K SK+  +K+G+  A   VPY VRM+AVTVISKPMA+EK+T KFYKL+K AAK+KI RRGVKEVCKG+RQGRKGICVIAGDISPIDVISH+AY+CEE+GV+YIYVPSKVDLGAAAKTKRPTSCVL+TPP E K + W+ +  ELF  L EVC +EM QVP
Sbjct:    1 MTKEDKAKSPKRQKTSKDIKIKEGETDA---VPYAVRMKAVTVISKPMADEKKTKKFYKLIKKAAKEKICRRGVKEVCKGMRQGRKGICVIAGDISPIDVISHMAYYCEEQGVNYIYVPSKVDLGAAAKTKRPTSCVLITPPRETKDSVWDPVTKELFADLKEVCIQEMVQVP 170          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: A0A836CPU2_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU2_9STRA)

HSP 1 Score: 149 bits (376), Expect = 5.180e-43
Identity = 78/139 (56.12%), Postives = 100/139 (71.94%), Query Frame = 0
Query:   31 YDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAEWESLELFQKLTEVCTKEMSQVPK 169
            Y+ R++A TVI++PMA +KQ  K YKL+K +A  K  RRGVKEV        KG+CVIAGDISPIDVI+HL  +CEE  V Y+YVPSK DLGAAA TKRPTSCVL+TP P      ++S +L+ ++  +C +E SQVP+
Sbjct:   19 YEERLKACTVIARPMATKKQAKKLYKLVKKSAGAKSVRRGVKEVXXXXXXXXKGVCVIAGDISPIDVITHLPVYCEENEVRYMYVPSKQDLGAAASTKRPTSCVLITPKPG-----FDSQDLYTEVEAMCAEEESQVPR 152          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: M4C1U3_HYAAE (Ribosomal_L7Ae domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1U3_HYAAE)

HSP 1 Score: 139 bits (351), Expect = 2.730e-39
Identity = 73/128 (57.03%), Postives = 96/128 (75.00%), Query Frame = 0
Query:   31 YDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAEWESLELFQKLTE 158
            Y+ R++ V+VISKP+A++KQT + YK+LK A K K  RRGVKEV K IR+G KG+CVIAGDISPIDVISH+   CEE  + YI+ PS+VDLGA+  +KRPTSC+L+TP     +A +  LE + +L E
Sbjct:   16 YEERVKHVSVISKPLASKKQTKRTYKVLKKATKVKGIRRGVKEVVKSIRKGEKGVCVIAGDISPIDVISHIPTLCEENDIPYIFTPSRVDLGASVLSKRPTSCILITP----NKAGFNVLEAYNELLE 139          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: K3WNU8_GLOUD (Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID=K3WNU8_GLOUD)

HSP 1 Score: 139 bits (349), Expect = 5.000e-39
Identity = 70/130 (53.85%), Postives = 100/130 (76.92%), Query Frame = 0
Query:   29 VPYDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAEWESLELFQKLTE 158
            V Y+ R++ V+VI+KP+A++KQT + YK++K A K K  +RGVKEV K IR+G KG+C+IAGDISPIDVISH+   CEE  + Y++ PSKVDLGA+A +KRPTSC+L+TP     +A + +L+ +++L E
Sbjct:   11 VSYEERVKHVSVIAKPLASKKQTKRAYKVVKKATKVKGIKRGVKEVVKSIRKGEKGVCIIAGDISPIDVISHIPVLCEENDIPYLFTPSKVDLGASALSKRPTSCILITPG----KAGFNALDAYEELLE 136          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: A0A1V9ZK33_9STRA (Ribonucloprotein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZK33_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.930e-38
Identity = 64/110 (58.18%), Postives = 86/110 (78.18%), Query Frame = 0
Query:   29 VPYDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTP 138
            V Y+ R++ V+VI+ P+AN+K T K YKL+K + K K  +RGVKEV K IR+G KG+C+IAGDISP+DVISH+   CE   + Y++ PSKVDLGA+A +KRPTSC++VTP
Sbjct:   10 VTYEERVKHVSVIANPLANKKLTKKVYKLIKKSTKVKCTKRGVKEVVKAIRKGEKGLCIIAGDISPVDVISHIPVLCENNDIAYVFTPSKVDLGASASSKRPTSCIMVTP 119          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: A0A7S2SAZ3_9STRA (Ribonucloprotein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAZ3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.380e-38
Identity = 79/134 (58.96%), Postives = 94/134 (70.15%), Query Frame = 0
Query:   25 AAAPVPYDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAEWESLELFQKLTE 158
            AA  + Y+ R++AV+ IS PMA +K T K + L+K A+  K  RRGVKEV K +R+  KGICVIAGDISPIDVISH+   CEEK V YIYVPSK DLGAAA TKRPTS VLV   P+     +E  EL+ KL E
Sbjct:   33 AAEEITYEQRLKAVSPISNPMAPKKLTKKLHXLVKKASSAKGIRRGVKEVVKALRKNEKGICVIAGDISPIDVISHIPVFCEEKDVPYIYVPSKQDLGAAASTKRPTSVVLVQCKPQ-----FEEKELYDKLME 161          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: F0YBI4_AURAN (Ribonucloprotein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBI4_AURAN)

HSP 1 Score: 135 bits (339), Expect = 5.840e-38
Identity = 69/108 (63.89%), Postives = 83/108 (76.85%), Query Frame = 0
Query:   31 YDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTP 138
            Y+ R+ A++ IS P+A+EK T K +KL+K A+  K  RRGVKEV K IR+G  G+C+IAGDISPIDVI HL   CEEK V YIYVPSK DLG AA TKRPTSCV+V+P
Sbjct:    1 YEERLAALSPISTPLADEKLTKKLHKLVKKASSAKALRRGVKEVVKAIRKGATGLCIIAGDISPIDVICHLPIFCEEKSVPYIYVPSKQDLGFAALTKRPTSCVMVSP 108          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: A0A7S3PXD9_9STRA (Ribonucloprotein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXD9_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.420e-37
Identity = 73/129 (56.59%), Postives = 98/129 (75.97%), Query Frame = 0
Query:   29 VPYDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAE-WESLELFQKL 156
            V Y+ R+QAV  IS+P+A++K T K +KL+K A+  KI RRGVKEV KGIR+  KGIC++AGDI PIDVISHL    EE G+ YI+VPSK +LGAAA TKRPTS VL+  P + K ++ +E+++L++ L
Sbjct:   12 VSYEERVQAVNRISQPLASKKSTKKAHKLVKKASSAKIVRRGVKEVVKGIRKNEKGICILAGDIYPIDVISHLPVLLEENGIPYIFVPSKQELGAAACTKRPTSVVLIRDPEKTKSSKKFEAMDLYKTL 140          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: A0A7S3MHC4_9STRA (Ribonucloprotein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC4_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.630e-37
Identity = 64/108 (59.26%), Postives = 86/108 (79.63%), Query Frame = 0
Query:   31 YDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTP 138
            YD +++ V+ I++P+A++K T K +KL+K A++ K  RRGVKEV K +R+G KG C+IAGDISPIDV+ HL   CE++ + Y YVPSK+DLGAAA TKRPTSC+LVTP
Sbjct:   11 YDEKVKFVSKIAQPLASKKTTKKLHKLVKKASQAKFVRRGVKEVVKALRKGSKGFCIIAGDISPIDVVVHLPIMCEDRRIPYFYVPSKLDLGAAASTKRPTSCILVTP 118          
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Match: A0A024TAU2_9STRA (Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TAU2_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.280e-37
Identity = 64/110 (58.18%), Postives = 86/110 (78.18%), Query Frame = 0
Query:   29 VPYDVRMQAVTVISKPMANEKQTLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISHLAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTP 138
            V Y+ R++ V+VI++P+A +K T K YKL+K + K K  +RGVKEV K IR+G KG+CVIAGDISPIDVISH+   CE   + Y++ PSKVDLGA+A +KRPTSC+++TP
Sbjct:   11 VTYEERVKHVSVIAQPLAVKKLTKKLYKLVKKSTKVKCTKRGVKEVVKAIRKGEKGLCVIAGDISPIDVISHIPVLCESNDISYVFTPSKVDLGASASSKRPTSCIMITP 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2215.5869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G227_ECTSI1.260e-7171.68Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A836CPU2_9STRA5.180e-4356.12Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
M4C1U3_HYAAE2.730e-3957.03Ribosomal_L7Ae domain-containing protein n=1 Tax=H... [more]
K3WNU8_GLOUD5.000e-3953.85Ribonucloprotein n=5 Tax=Oomycota TaxID=4762 RepID... [more]
A0A1V9ZK33_9STRA3.930e-3858.18Ribonucloprotein n=4 Tax=Saprolegniaceae TaxID=476... [more]
A0A7S2SAZ3_9STRA4.380e-3858.96Ribonucloprotein n=1 Tax=Rhizochromulina marina Ta... [more]
F0YBI4_AURAN5.840e-3863.89Ribonucloprotein (Fragment) n=1 Tax=Aureococcus an... [more]
A0A7S3PXD9_9STRA1.420e-3756.59Ribonucloprotein n=1 Tax=Chaetoceros debilis TaxID... [more]
A0A7S3MHC4_9STRA1.630e-3759.26Ribonucloprotein n=1 Tax=Spumella elongata TaxID=8... [more]
A0A024TAU2_9STRA3.280e-3758.18Ribonucloprotein n=5 Tax=Aphanomyces TaxID=100860 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 102..112
score: 39.67
coord: 67..81
score: 29.39
coord: 86..99
score: 37.34
coord: 112..126
score: 45.15
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 54..144
e-value: 3.7E-23
score: 81.1
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 32..159
e-value: 2.3E-38
score: 132.6
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 39..147
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 33..153
NoneNo IPR availablePANTHERPTHR23105:SF121H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 2-LIKE PROTEINcoord: 33..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2215contigH-paniculata_contig2215:2155..11251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2215.5869.1mRNA_H-paniculata_contig2215.5869.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2215 744..11826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2215.5869.1 ID=prot_H-paniculata_contig2215.5869.1|Name=mRNA_H-paniculata_contig2215.5869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
MAKEEKAKSKSKKSKEAVKDGDKVAAAPVPYDVRMQAVTVISKPMANEKQ
TLKFYKLLKAAAKDKIARRGVKEVCKGIRQGRKGICVIAGDISPIDVISH
LAYHCEEKGVHYIYVPSKVDLGAAAKTKRPTSCVLVTPPPEKKQAEWESL
ELFQKLTEVCTKEMSQVPKPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like