mRNA_H-paniculata_contig22133.5863.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: D8LES4_ECTSI (CCT-theta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES4_ECTSI) HSP 1 Score: 420 bits (1079), Expect = 4.410e-143 Identity = 213/236 (90.25%), Postives = 224/236 (94.92%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
QG VKRAENAKVAVFACGLE SSTETKGTVLIRTGEELM+YNKGEEKVVED++K+I +AGTKVIVAGGTVSDMCMHFIEKY MM++KVLSKWELRRICNAVHATALVRMGAPTPDEMG CALVEV+EVGLRKVTVFSQ+DDDSRIATIVLRAST+SLLNDLERAVDDSVACVRGLCRDPRFVPG GATEMELAHQI K GESQ LDQYAI KFAEALEV+PRILSETSG DAEKV
Sbjct: 233 QGLVKRAENAKVAVFACGLEMSSTETKGTVLIRTGEELMSYNKGEEKVVEDAMKSIADAGTKVIVAGGTVSDMCMHFIEKYEMMVIKVLSKWELRRICNAVHATALVRMGAPTPDEMGDCALVEVREVGLRKVTVFSQDDDDSRIATIVLRASTQSLLNDLERAVDDSVACVRGLCRDPRFVPGGGATEMELAHQIFKHGESQTGLDQYAIKKFAEALEVVPRILSETSGQDAEKV 468
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A425BWK5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425BWK5_9STRA) HSP 1 Score: 309 bits (791), Expect = 3.630e-101 Identity = 146/236 (61.86%), Postives = 195/236 (82.63%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G VK+A +AK+A+F CGLE SSTE K TVLI+ +ELMNYNKGEEK +E++++AI E+G V+V+GG++S+M MHF+EKYN+M +K+ SKWELRR+C AV+A ALVR+GAPTPDEMG C V V+E+G +KVTVF Q+ +D++I+TIVLRAST+++LND+ERA+DD V CV+ +CRD RFV GAG+TE+EL+ QI FGE+ LDQYAI KF +A+EV+PRIL+E SG A +V
Sbjct: 111 EGNVKKALHAKIAIFGCGLEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMAMHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFQQDQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKSFGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEV 346
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A835Z415_9STRA (CCT-theta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z415_9STRA) HSP 1 Score: 313 bits (802), Expect = 3.830e-101 Identity = 151/236 (63.98%), Postives = 193/236 (81.78%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G +KR E+AKV VF CG+EASSTE KGTVLIRT EELMNYNK EEK++E+ IK+I ++G +V+VA G++S+M +H++EKY +M++K+ SKWELRR+C A+ ATALVR+G TPDEMG LVEV+EVG R +TV +++D+D+R+AT+VLRASTE LL+DL RAVDD V C R LC DPRFVPGAGATE +LA ++ F ++Q LDQYAI KFAEALEV+PR+L ETSG DA V
Sbjct: 233 EGSIKRVEDAKVTVFGCGIEASSTEAKGTVLIRTAEELMNYNKSEEKLMEEIIKSIADSGAQVVVANGSISEMALHYLEKYGLMVLKITSKWELRRLCAALRATALVRLGPATPDEMGRATLVEVREVGGRNITVVARDDEDARLATVVLRASTEPLLSDLGRAVDDGVQCARALCLDPRFVPGAGATEAQLAARVRAFADTQTGLDQYAIRKFAEALEVVPRVLCETSGLDATAV 468
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: H3G986_PHYRM (CCT-theta n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3G986_PHYRM) HSP 1 Score: 307 bits (787), Expect = 5.080e-99 Identity = 145/236 (61.44%), Postives = 194/236 (82.20%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G+VK+A AKVAVF CG+E SSTE K TVLI+ +ELMNYNKGEEK +E++++AI E+G V+V+GG++S+M +HF+EKYN+M +K+ SKWELRR+C AV+A A+VR+GAPTPDEMG C V V+E+G +KVTVF Q +D++I+TIVLRAST+++LND+ERA+DD V CV+ +CRD RFV GAG+TE+EL+ QI FGE+ LDQYAI KF +A+EV+PRIL+E SG A +V
Sbjct: 233 EGYVKKALKAKVAVFGCGIEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAVRAISESGATVVVSGGSISEMSLHFLEKYNLMAIKIQSKWELRRLCRAVNANAMVRLGAPTPDEMGFCDSVTVKEIGGKKVTVFEQEQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDGRFVSGAGSTEIELSRQIKGFGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEV 468
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: K3WHS8_GLOUD (CCT-theta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHS8_GLOUD) HSP 1 Score: 306 bits (785), Expect = 1.040e-98 Identity = 144/236 (61.02%), Postives = 193/236 (81.78%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G VK+A NAKVAVF CG+E SSTE K TVLI+ ELMNYNKGEE+ +E++I+ I E+G V+V+GG++S+M +HF+EKY ++ VK+ SKWELRR+C AV+A ALVR+GAPTPDEMG C V V+E+G +KVTVF+Q D+D++I+TI+LRAST+++LND+ERA+DD V CV+ C+DPRFV GAGA+E+EL+ Q+ FGE+ LDQYAI KF +ALE++PRIL+E SG A +V
Sbjct: 233 EGNVKKALNAKVAVFGCGIEVSSTEAKSTVLIKDASELMNYNKGEEQRLEEAIRGIAESGANVVVSGGSISEMALHFLEKYKLLAVKIQSKWELRRLCRAVNANALVRLGAPTPDEMGLCDSVTVKEIGGKKVTVFNQEDEDAKISTIILRASTDNVLNDIERAIDDGVNCVKAACKDPRFVAGAGASEVELSRQVKSFGEATPGLDQYAIKKFGDALEIVPRILAENSGKMATEV 468
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: M4B3A9_HYAAE (CCT-theta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3A9_HYAAE) HSP 1 Score: 307 bits (786), Expect = 1.340e-98 Identity = 145/236 (61.44%), Postives = 195/236 (82.63%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G+VK+A AKVAV+ CG+E SSTE K TVLI+ +ELMNYNKGEEK +E++I+AI E+G V+V+GG++S+M +HF+EKYN+M +K+ SKWELRR+C AV+A ALVR+GAPTPDEMG C V V+E+G +KVTVF Q+ +D++I+TIVLRAST+++LND+ERA+DD V CV+ +CRD RFV GAG+TE+EL+ QI +GE+ LDQYAI KF +A+EV+PRIL+E SG A +V
Sbjct: 233 EGFVKKALKAKVAVYGCGIEISSTEAKSTVLIKDADELMNYNKGEEKHLEEAIRAISESGAVVVVSGGSISEMALHFLEKYNLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVMVKEIGGKKVTVFQQDQEDAKISTIVLRASTDNVLNDIERAIDDGVNCVKSVCRDDRFVAGAGSTEIELSRQIKSYGEATPGLDQYAIKKFGDAIEVVPRILAENSGQMATEV 468
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: W7TQJ5_9STRA (Chaperonin containing tcp1 theta subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQJ5_9STRA) HSP 1 Score: 304 bits (778), Expect = 1.110e-97 Identity = 147/233 (63.09%), Postives = 193/233 (82.83%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDA 699
+G +KRA AKVAVF CG+EASSTETKGTVLIR EEL+NYNKGEEK++ED IK+I ++G +V+V GG++S+M +HF+E+Y +M+VK+ SKWELRR+C AV+ATALVR+GAPTP+E G EV+EVG RKVTVF Q ++SR+A+I+LRAST+++L DLERAVDD V V+ LC+D RF+PGAGA E+ELA +I+K ++ LDQYA+ KFAEALEV+PR L+E+SG +A
Sbjct: 233 EGTIKRALKAKVAVFGCGIEASSTETKGTVLIRNAEELLNYNKGEEKLMEDIIKSIADSGVQVLVTGGSISEMALHFLERYKLMVVKIQSKWELRRLCGAVNATALVRLGAPTPEEAGFVDRAEVREVGGRKVTVFEQEAEESRVASIILRASTQNVLEDLERAVDDGVNTVKVLCQDGRFLPGAGAVEIELARRIAKLADASTGLDQYAMRKFAEALEVVPRTLAESSGQEA 465
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A2D4C5B0_PYTIN (CCT-theta n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5B0_PYTIN) HSP 1 Score: 305 bits (780), Expect = 5.100e-96 Identity = 145/236 (61.44%), Postives = 191/236 (80.93%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G VK+A AKVAVF CG+E SSTE K TVLI+ +ELMNYNK EEK +E++I+AI E+G KV+V+GG++S+M MHF+EKY +M +K+ SKWELRR+C AV+A ALVR+GAPTPDEMG C V V+E+G +KVT+F Q +D++++TIVLRASTE++LND+ERA+DD V CV+ C+D RFV GAGATE+EL+ QI FGE+ LDQYAI KF +ALE++PRIL+E +G A +V
Sbjct: 413 EGVVKKAMGAKVAVFGCGIEISSTEAKSTVLIKDADELMNYNKSEEKHLEEAIRAIAESGAKVVVSGGSISEMAMHFLEKYQLMAIKIQSKWELRRLCRAVNANALVRLGAPTPDEMGFCDSVMVKEIGGKKVTIFRQEKEDAKMSTIVLRASTENVLNDIERAIDDGVNCVKATCKDARFVAGAGATELELSRQIKSFGEATPGLDQYAIKKFGDALEIVPRILAENAGQMATEV 648
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: W4H1N7_9STRA (CCT-theta n=2 Tax=Aphanomyces TaxID=100860 RepID=W4H1N7_9STRA) HSP 1 Score: 298 bits (762), Expect = 6.940e-95 Identity = 139/236 (58.90%), Postives = 192/236 (81.36%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G VK+ + AKVAVF CG+E SSTE K TVLI+T +ELMNYNKGEE+ ++++I+AI E+G V++AGG++S+M +HF+EKY+++ +++ SKWELRR+C AV+ATALVR+GAPTP+EMG C V VQEVG +K+TVF Q+ +D+++ATI+LRAST+++LNDLERA+DD V V+ C+D RFV G GATE+E+A QI FG + LDQYAI KFAEALE++PR+L+E +G +V
Sbjct: 266 EGSVKKVDGAKVAVFGCGIEVSSTEAKSTVLIKTADELMNYNKGEEERLDEAIRAISESGATVVIAGGSISEMALHFLEKYHLLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVSVQEVGGKKITVFRQDQEDAKMATIILRASTDNVLNDLERAIDDGVNTVKAACKDGRFVAGGGATEIEVARQIEAFGNTIPGLDQYAIKKFAEALEIVPRMLAENAGQQGTEV 501
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Match: A0A485KST6_9STRA (CCT-theta n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KST6_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.150e-94 Identity = 134/236 (56.78%), Postives = 195/236 (82.63%), Query Frame = 1
Query: 1 QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEDSIKAIFEAGTKVIVAGGTVSDMCMHFIEKYNMMIVKVLSKWELRRICNAVHATALVRMGAPTPDEMGSCALVEVQEVGLRKVTVFSQNDDDSRIATIVLRASTESLLNDLERAVDDSVACVRGLCRDPRFVPGAGATEMELAHQISKFGESQARLDQYAINKFAEALEVIPRILSETSGHDAEKV 708
+G VK+ + AKVAVF CG+E S+TE K TVLI+T +ELMNYNKGEE+ ++++I+AI ++G KV++AGG++S+M +HF+EKY ++ +++ SKWELRR+C AV+ATALVR+GAPTP+EMG C V+V+E+G +K+TVFSQ+++D++++TI+LRAST+++LNDLERA+DD V V+ C+D RFV G GA+E+E+A Q+ FG + LDQYAI KFAEALE++PR L+E +G A ++
Sbjct: 233 EGSVKKVDGAKVAVFGCGIEVSATEAKSTVLIKTADELMNYNKGEEERLDEAIRAIADSGAKVVIAGGSISEMALHFLEKYELLSIRIQSKWELRRLCRAVNATALVRLGAPTPEEMGFCDHVQVKEIGGKKITVFSQDEEDAKMSTIILRASTDNVLNDLERAIDDGVNTVKAACKDVRFVAGGGASEIEIARQVEAFGNTTPGLDQYAIKKFAEALEIVPRTLAENAGQMATQI 468 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22133.5863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22133.5863.1 >prot_H-paniculata_contig22133.5863.1 ID=prot_H-paniculata_contig22133.5863.1|Name=mRNA_H-paniculata_contig22133.5863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp QGWVKRAENAKVAVFACGLEASSTETKGTVLIRTGEELMNYNKGEEKVVEback to top mRNA from alignment at H-paniculata_contig22133:411..4145- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22133.5863.1 ID=mRNA_H-paniculata_contig22133.5863.1|Name=mRNA_H-paniculata_contig22133.5863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3735bp|location=Sequence derived from alignment at H-paniculata_contig22133:411..4145- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22133:411..4145- >mRNA_H-paniculata_contig22133.5863.1 ID=mRNA_H-paniculata_contig22133.5863.1|Name=mRNA_H-paniculata_contig22133.5863.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at H-paniculata_contig22133:411..4145- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |