mRNA_H-paniculata_contig22114.5855.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: A0A6H5JH92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH92_9PHAE) HSP 1 Score: 226 bits (575), Expect = 3.070e-65 Identity = 107/170 (62.94%), Postives = 131/170 (77.06%), Query Frame = 3
Query: 3 IMFAILIDDVFPIGLTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCIIFSMATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVADNNTPSQ 512
+++A LIDDVFPIG TNAFG G+ Y+ VYLRN W DKR+ V R AW+IF GA+ II MAT+ V ++++W A D +GY VD F + LY SPL LAWKVLRTR TSGMYLPL++TI AA++LW+ YG+LTSD FV PQSVG LAGLAQLSLF+ FG+ADNN PS+
Sbjct: 52 VVYASLIDDVFPIGFTNAFGFVAGSTYSAVYLRNCWHDKRERVRRDAWRIFAGAVSIIGLMATSAVVMAVVWSSTTAADSIGYFVDVFNVCLYASPLELAWKVLRTRSTSGMYLPLSITIAAAAALWATYGYLTSDWFVAAPQSVGFLAGLAQLSLFLRFGIADNNQPSE 221
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: D8LS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS37_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.040e-38 Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 3
Query: 183 MATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVADNNTPSQ 512
M T+ V ++++W A D +GY VD F + LY SPL LAWKVLRTR TSGMYLPL++TI AA++LW+ YG+LTSD FV PQSVG LAGLAQLSLF+ FG+ADNN PS+
Sbjct: 1 MVTSAVVMTVVWSSTTAADSIGYFVDLFNVCLYASPLELAWKVLRTRSTSGMYLPLSITIAAAAALWATYGYLTSDWFVAAPQSVGFLAGLAQLSLFLRFGIADNNQPSE 110
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: B3RTA1_TRIAD (Sugar transporter SWEET1 n=2 Tax=Trichoplax TaxID=10227 RepID=B3RTA1_TRIAD) HSP 1 Score: 79.3 bits (194), Expect = 4.240e-13 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 3
Query: 45 LTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCI-IFSMATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVADNNTPSQLP 518
+ N G + YA +Y + + +NR ++ GA + + + G++ +A + LG I T+++YGSPLA A KV+R + M L L L S W AYG++ + FV +P ++G++ G+ QL LF + V + T Q+P
Sbjct: 67 IVNVIGVVLESIYAVIYYVHL--SNKSSINRMT--LYAGAFILSVLAYVKYGIS-----SYDVALNLLGIICSLTTIIMYGSPLASALKVIRNNSSESMQLSLCLANALVSFEWGAYGYIIGNQFVMIPNTIGVVLGVLQLVLFFRYRVESSKTDKQIP 216
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: A0A225UKM4_9STRA (MtN3-like protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UKM4_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.090e-12 Identity = 43/168 (25.60%), Postives = 88/168 (52.38%), Query Frame = 3
Query: 3 IMFAILIDDVFPIGLTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCIIFSMATAGVTISLIWGKKMATDR--------LGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMF 482
I++A L+D++ P+ + AFG + +Y R W + R +++ LC I + A T+ I G T++ LG + D +++LY SPL +V++T+ + + + ++ + +++W+ + F D+FV VP ++G+L +AQ+ L+I++
Sbjct: 48 ILYAYLVDNILPLFVNCAFGMVTSIVFGGIYYR--WSNDRPRIHK---------LCAIAFVVLALYTVYYILGTSGVTNQSDDSVEKVLGVLSDIVSLILYASPLETMKQVIQTKDATTLPIIISAIFLTNTTVWTVFAFADDDMFVVVPNAIGMLVCIAQVVLYIVY 204
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: W2R3P1_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2R3P1_PHYPN) HSP 1 Score: 78.2 bits (191), Expect = 4.130e-12 Identity = 38/162 (23.46%), Postives = 83/162 (51.23%), Query Frame = 3
Query: 3 IMFAILIDDVFPIGLTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFL--GALCIIFSMATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMF 482
+++A L+D++ P+ + FG F + +Y W R +++ F+ I + + T GVT LG + D ++ +Y SPL +V++T+ + + + ++ + +++W+ + F D+FV VP ++G+L +AQ++L++M+
Sbjct: 100 VLYAYLVDNILPLFVNCCFGMFTSVVFGAIYYH--WSTNRSHIHKVCAVAFITMAIYTIYYIVGTTGVTNQ---SDDAVEKVLGVVSDIVSLAMYASPLEAMKQVIQTKDATALPIIISAIFLTNTTVWTVFAFADDDMFVVVPNAIGMLVCVAQIALYVMY 256
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: A0A2C9WEN7_MANES (Bidirectional sugar transporter SWEET n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WEN7_MANES) HSP 1 Score: 76.3 bits (186), Expect = 1.110e-11 Identity = 52/185 (28.11%), Postives = 94/185 (50.81%), Query Frame = 3
Query: 24 DDVFPIGLTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCIIFSMATAGV----TISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVA----DNNTPSQLPSVP-DTVVDSEC 551
D + I NA GC Y +YL + ++R IF L ++F++ G+ T+ L G K T +G+I F + ++ +PL++ +V++T+ M LPL+ + ++ W YGFL D F+ +P +G+L GL Q+ L++++ + D+ T + + +TVVD +C
Sbjct: 67 DKAYLIISINAIGCAIELIYIILYLIYASKEER---------IFTAKLVVVFNIGGCGMMMVCTMLLAKGSKRVTI-VGWICAAFAIAVFAAPLSIMRRVIKTKSVEFMPLPLSFFLTLSAIAWFFYGFLIKDFFIALPNILGILFGLVQMGLYMLYKNSSKQQDDGTKEVMKTEDSNTVVDDQC 241
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: A0A0S3QY01_PHAAN (Bidirectional sugar transporter SWEET n=4 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3QY01_PHAAN) HSP 1 Score: 76.6 bits (187), Expect = 1.170e-11 Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = 3
Query: 51 NAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCIIFSMATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVADNNTPSQLPSVPDTVVDSECGNSQVRNANAPAKS 593
NAFGCF T Y +Y+ RK IFL + +IF + +T L + + LG+I + ++ +PL++ V+RT+ M + L+L + ++ +W AYG L D++VT+P VG+ G Q+ L+ ++ +LP D + E GN+ V + N A S
Sbjct: 74 NAFGCFIETVYLVIYITYC---PRKARFFTFKMIFLFNVGVIFLVVL--LTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPITLSLLLTVSAIMWLAYGILLRDIYVTLPNFVGITFGTIQIVLYFIYRKHTPGKDQKLPEQKDNATNEENGNTAVSSENHAANS 249
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: A0A0D2MQ93_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MQ93_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 1.320e-11 Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 3
Query: 156 LGALCII-FSMATAGVTIS-LIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMF 482
L LC F+M GV S +I A G D T+L YGSPLA AWKV+RTR ++ + L L I+ S LW+ YGF+ D F+ VP S+G+ GL L +F
Sbjct: 2 LAVLCFTAFTMPLLGVVSSVIIKDHAKAMMMWGLTADAITVLYYGSPLAAAWKVIRTRNSASILLLRLLCDISNSGLWTVYGFMVGDPFIFVPNSIGVSLGLCLAVLKALF 112
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: A0A7J7DBM3_TRIWF (Bidirectional sugar transporter SWEET n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DBM3_TRIWF) HSP 1 Score: 75.9 bits (185), Expect = 1.430e-11 Identity = 49/178 (27.53%), Postives = 91/178 (51.12%), Query Frame = 3
Query: 3 IMFAILIDDVFPIGLTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCIIFSMATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVADNNTPSQLPSVPDTV 536
I +A L + + + N+FGC T Y +++ + + R + G C+I V+ + G K + LG++ D F + ++ +PL++ KV++T+ M L+ + ++ +W YGFL DLFV VP ++G L G+AQ+SL+ ++ N +LP+V + +
Sbjct: 40 IYYASLKSNEYLLITINSFGCVTETIYIAIFIAYAPKQVKMPTLRLVILLNFGGFCLILL-----VSHYFLKGAKRL-EVLGWLCDAFAVGVFAAPLSIMKKVIQTKSVEFMPFYLSFFLTLSAVMWFFYGFLMKDLFVAVPNTLGFLFGVAQMSLYAVY----KNYKKKLPAVAEVL 207
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Match: I1KBZ8_SOYBN (Bidirectional sugar transporter SWEET n=1 Tax=Glycine max TaxID=3847 RepID=I1KBZ8_SOYBN) HSP 1 Score: 76.3 bits (186), Expect = 1.620e-11 Identity = 50/169 (29.59%), Postives = 81/169 (47.93%), Query Frame = 3
Query: 51 NAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFLGALCIIFSMATAGVTISLIWGKKMATDRLGYIVDFFTMLLYGSPLALAWKVLRTRCTSGMYLPLTLTIIAASSLWSAYGFLTSDLFVTVPQSVGLLAGLAQLSLFIMFGVADNNTP---SQLPSVPDTVVDSE 548
NAFGC T Y V++ R R + G C I + T L G++ LG+I F ++ +PL++ V+RT+ + PL+L ++ ++ +W YG D++VT+P VGL G+ Q+ L+ M+ NN P +LP +V+SE
Sbjct: 56 NAFGCVIETIYLAVFITYCPKKARMSTLRMIVLLNFGGFCTIVLL-----THLLAKGEEARVKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLLISAIMWLLYGISLKDIYVTLPNVVGLTFGVIQIGLYAMYR---NNKPIKDQKLPEHKGDIVESE 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22114.5855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22114.5855.1 >prot_H-paniculata_contig22114.5855.1 ID=prot_H-paniculata_contig22114.5855.1|Name=mRNA_H-paniculata_contig22114.5855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp MFAILIDDVFPIGLTNAFGCFCGTAYACVYLRNSWGDKRKEVNRRAWKIFback to top mRNA from alignment at H-paniculata_contig22114:2..3979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22114.5855.1 ID=mRNA_H-paniculata_contig22114.5855.1|Name=mRNA_H-paniculata_contig22114.5855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3978bp|location=Sequence derived from alignment at H-paniculata_contig22114:2..3979- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22114:2..3979- >mRNA_H-paniculata_contig22114.5855.1 ID=mRNA_H-paniculata_contig22114.5855.1|Name=mRNA_H-paniculata_contig22114.5855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig22114:2..3979- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |