prot_H-paniculata_contig22111.5854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig22111.5854.1
Unique Name	prot_H-paniculata_contig22111.5854.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	151

Homology

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KMT4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT4_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 7.770e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            C+GC   K+HR      T R     ER++ DL GP R +S  G  Y+++ VDDYSR+  V F+K+KS+  +  Q +        G K+  +RT+N GEF  +  L    +HGI  E +
Sbjct:  476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2JZV9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JZV9_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 7.780e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            C+GC   K+HR      T R     ER++ DL GP R +S  G  Y+++ VDDYSR+  V F+K+KS+  +  Q +        G K+  +RT+N GEF  +  L    +HGI  E +
Sbjct:  162 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 279

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KKQ4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KKQ4_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 7.790e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            C+GC   K+HR      T R     ER++ DL GP R +S  G  Y+++ VDDYSR+  V F+K+KS+  +  Q +        G K+  +RT+N GEF  +  L    +HGI  E +
Sbjct:  476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KB33_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB33_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 8.100e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            C+GC   K+HR      T R     ER++ DL GP R +S  G  Y+++ VDDYSR+  V F+K+KS+  +  Q +        G K+  +RT+N GEF  +  L    +HGI  E +
Sbjct:  476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2JWG0_9BRAS (Uncharacterized protein n=10 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JWG0_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 8.230e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            C+GC   K+HR      T R     ER++ DL GP R +S  G  Y+++ VDDYSR+  V F+K+KS+  +  Q +        G K+  +RT+N GEF  +  L    +HGI  E +
Sbjct:  476 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 593

[Close]

BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6D2KB39_9BRAS (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB39_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 8.430e-16
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            C+GC   K+HR      T R     ER++ DL GP R +S  G  Y+++ VDDYSR+  V F+K+KS+  +  Q +        G K+  +RT+N GEF  +  L    +HGI  E +
Sbjct:  750 CEGCQYGKSHRLPFDNSTSRCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFS 867

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A1D2M5N7_ORCCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2M5N7_ORCCI)

HSP 1 Score: 82.4 bits (202), Expect = 1.940e-15
Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = 0

Query:    4 HRLLAHAS-----EQITRDTAATVGV-VLTGEWGGCKGCSTAKAHRFAVPKKTDR-ATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYG-DFHLELGEHGIIH 146
            H  LAH +     E I R+ AA + +  L+GE+  C+ C   KAH+   P+  +  A   AE ++VDL G    TSLGGSSY ++I D+ + F+AV F+K K++A   +  Y+         +V ++R++N  EF   D    L E GIIH
Sbjct:  451 HSRLAHVNLDYIKETIKREAAAGIALGELSGEFS-CEECILGKAHKSPFPRVPENTAITPAEIMHVDLSGKYDTTSLGGSSYFLLIKDERTSFRAVYFLKSKAEAAGCIMRYVNFIENQTNHQVRILRSDNGTEFVNHDLTSFLNEKGIIH 600

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6H5GTD8_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GTD8_9HEMI)

HSP 1 Score: 82.0 bits (201), Expect = 2.760e-15
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 0

Query:   33 CKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYG-DFHLELGEHGIIHELTPS 151
            C  C   K  +   PKK+ R +   + +++DL GPMR  S GG+ Y + ++DDYSR+  ++F+KKKSD  A  + +     T KG K+  I+++N  EF   +F   L E+GI   LT +
Sbjct:  440 CTICLQGKMTQTPFPKKSSRTSQKLDLIHMDLCGPMRVQSKGGAKYFLTLIDDYSRWCEIRFLKKKSDVFAEFKKFKNLVETQKGRKIKCIQSDNGKEFCNREFDRYLEENGISRRLTVN 559

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A6H5KGJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ8_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.920e-15
Identity = 59/171 (34.50%), Postives = 78/171 (45.61%), Query Frame = 0

Query:    4 HRLLAHASEQITRDTAATVGVVLT-GEWGGCKGCSTAKAHRFA---------------------VPKKTD-RATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPK-GLKVGVIRTENSGEFYGDFHLELGEHGIIHELTP 150
            H    H  E + R TA   GV LT G    C GCS  K                          V K T  RA     R+Y+DLGG M+  S+G   Y ++I DD+SR+  V F+K KSDA    + ++ +Y T +   +V + RT++ GEF G F      HGI  E TP
Sbjct:  139 HLAHGHDHETLLRITAEQQGVQLTDGPLLPCLGCSVFKGXXXXXXXXXXXXXXXXXXXXXQVKPVQKSTSTRADKKLFRVYLDLGGKMKTRSIGDHWYTLMIRDDFSRWTRVFFLKHKSDAAVGFEKFLVDYRTKEVPCEVYITRTDDGGEFQGQFAEVFRRHGIKQEFTP 309

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BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Match: A0A8J5ESC8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ESC8_ZINOF)

HSP 1 Score: 81.3 bits (199), Expect = 5.020e-15
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 0

Query:   31 GGCKGCSTAKAHRFAVPKKTDRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSDATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLEL-GEHGIIHELT 149
            G C+GC   K+HR      T R T   ER++ DL GP + TS    +Y+++ VDDYSRF  V F+K KS+  +    +        G K+  +RT+N GEF  +  L    ++GI  EL+
Sbjct:  384 GVCEGCQFGKSHRLPFENSTSRCTTPLERIHSDLMGPTKTTSYSEGNYMLLFVDDYSRFTWVYFVKHKSETFSIFLDFKKIVEGELGRKIKTLRTDNGGEFCSNEFLSFCRDNGIKRELS 503

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig22111.5854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6D2KMT4_9BRAS	7.770e-16	36.44	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A6D2JZV9_9BRAS	7.780e-16	36.44	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6D2KKQ4_9BRAS	7.790e-16	36.44	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A6D2KB33_9BRAS	8.100e-16	36.44	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A6D2JWG0_9BRAS	8.230e-16	36.44	Uncharacterized protein n=10 Tax=Coluteocarpeae Ta...	[more]
A0A6D2KB39_9BRAS	8.430e-16	36.44	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=...	[more]
A0A1D2M5N7_ORCCI	1.940e-15	36.42	Retrovirus-related Pol polyprotein from transposon...	[more]
A0A6H5GTD8_9HEMI	2.760e-15	36.67	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KGJ8_9PHAE	2.920e-15	34.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A8J5ESC8_ZINOF	5.020e-15	36.67	Uncharacterized protein n=1 Tax=Zingiber officinal...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 47..151 e-value: 1.4E-8 score: 36.2
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 27..148
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 27..148
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 43..151 score: 9.997
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 52..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig22111	contig	H-paniculata_contig22111:87..539 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig22111.5854.1	mRNA_H-paniculata_contig22111.5854.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig22111 87..539 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig22111.5854.1 ID=prot_H-paniculata_contig22111.5854.1|Name=mRNA_H-paniculata_contig22111.5854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MNKHRLLAHASEQITRDTAATVGVVLTGEWGGCKGCSTAKAHRFAVPKKT
DRATWAAERLYVDLGGPMRATSLGGSSYVIIIVDDYSRFQAVKFIKKKSD
ATAALQTYIAEYITPKGLKVGVIRTENSGEFYGDFHLELGEHGIIHELTP
S

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf