mRNA_H-paniculata_contig22091.5846.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22091.5846.1
Unique NamemRNA_H-paniculata_contig22091.5846.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A8J5YMD5_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YMD5_9ROSI)

HSP 1 Score: 223 bits (569), Expect = 8.350e-63
Identity = 138/377 (36.60%), Postives = 208/377 (55.17%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGTRKI---EDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLT----EAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDDGGEIDLLVAV 1110
            WAEAV +++Y LNR  T    G TP+E   G+KP + HLR+FGC  Y    +++R KL+ ++  GVF+GY      YRI+DP TK +  SR+V+F+E+       G  K DGT      ED ++P    P    EA+   D +PI                T  +A +    ++T       +K  K E W+ AME E   + +N TWE  +    P  RK +  +W+F+ K   DG + ++KARLVV+G+SQ +G DFFET APVAR+ T+R +F LAA+  +++  +DV  A+LN  ++EE+F++    F  S  +   V RL K+LYGLKQ  R W + +D  L  +G  +  ++  LY  +D+  E  L+V++
Sbjct:  119 WAEAVNTSVYLLNRLSTNAVKGKTPFEAWFGQKPTVSHLRVFGCLCYALVPAEKRTKLEKRSMPGVFVGYSRVKKGYRIFDPLTKKIIVSRDVKFNEE-------GYWKWDGTNASLLEEDQNSPDLQPPEIEAEAEDDYDDAPI--------------RGTRTLADIYERCAMTIVEPSCYAKAVKEECWQEAMEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGFLNKHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQKQWKVHQLDVKSAFLNGFLKEEIFIEQPEGFEVSGEEHK-VYRLKKALYGLKQVPRAWYDRIDACLSRLGFTKSISEPTLYVKKDEN-ETLLIVSL 469          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A151RWU2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RWU2_CAJCA)

HSP 1 Score: 213 bits (543), Expect = 4.910e-62
Identity = 142/382 (37.17%), Postives = 206/382 (53.93%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQ----KHDGTRKIEDF---STPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLT--------EAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDDGGEIDLL 1101
            W EA  + +Y LNR PT+      P E   G KP + HLRIFG   Y     ++R+KLDDK+ A +F+GY N + SY++++P+ + + FSR+V FDE     + +       K     K ED    +    V     T A RP      P R    +    DS  T     V+    +T        EA+SK    E WR+AMEEE  ++ +N TWE  +   LP  +K ++ +W+FK KLK DGS+A++KARLV +GF Q EG D+ E  APVAR+ T+R +  LA+  +++L  +DV  A+LN S++EE+FV     F    ++ L V RL K+LYGLKQ+ + WN  +D FL G G  + + +  +Y       EI +L
Sbjct:   16 WGEAAMTVVYVLNRCPTKRLGSMVPEEAWSGSKPSVKHLRIFGSLCYRHVPDQRRKKLDDKSEAMIFVGY-NSTGSYKLFNPKNQQVLFSRDVYFDESSSWAEFQSTSDIIPKTQFEWKDEDLVGETYQEVVNSECQTVADRPTRVKSFPLRLSDYQVYH-DSAITEEGDLVQHMALMTDMEPITFEEAISK----EVWRSAMEEELKSIEKNDTWEMVN---LPQNKKVIVVKWVFKTKLKSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRLIVALASWRNWKLWQLDVKSAFLNGSLDEEVFVAQPPGFICKGKE-LKVLRLKKALYGLKQALKAWNKRIDSFLTGFGFQKCSVEHGVYIKTVSETEILVL 387          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A6S7GU92_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU92_PARCT)

HSP 1 Score: 215 bits (548), Expect = 3.520e-61
Identity = 142/391 (36.32%), Postives = 212/391 (54.22%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGTRKI-EDFSTPPPVTPAS---------------GTEA---QRPRDRSPIPTRA-RARENREEDSGATT------RVAKV------EGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRD 1077
            WAEAV +A+   NR PT   D  TPYE  + +KP + + ++FGC AY+    + R+K D K    +F+GY   S  YR+YDP+T+ L  SR+V FDED+F+   +  Q  +    + ED   P    P+S               GTE     R  +    P R+ R RE  +      T       VA +      E   ++ EA++   K E+W+ A++ E+ A ++N TW     G LP  RKA+  RW+FK K   DGSV R+KARLV +G+SQ  G D+ ET +PVA+ +++R++  +A + D E+  +DV  A+LN  +EEE++++    +     + L V +L KS+YGLKQS R W NT+D FL   G  + ++D CLY  R+
Sbjct:  119 WAEAVCTAVIVRNRCPTVAVDNMTPYECFNDKKPDVSNFKVFGCKAYMHVPKETRKKWDSKTKKCIFVGYSISSKGYRLYDPKTRKLHISRDVLFDEDEFIQQKKFMQIVNLNDSLPEDQEEPQENKPSSEHVIPGDQDTVDHDEGTEEPSISRETEVEQQPRRSTRIREPPDRHGVVITGNWWQNNVACINSEFSPEEPTTIREALNCSDK-EQWKQALDNEYSAHIKNNTWTL---GNLPEGRKAIDCRWVFKVKYNADGSVERHKARLVAKGYSQEPGLDYDETFSPVAKYTSIRSLLAIANQLDLEVHQMDVSTAFLNGELEEEIYMKQPEGYVKEGVEDL-VCKLNKSIYGLKQSSRCWYNTIDQFLKNSGYVQSSSDPCLYIKRE 504          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A8J5ZME6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZME6_9ROSI)

HSP 1 Score: 218 bits (555), Expect = 1.210e-60
Identity = 134/371 (36.12%), Postives = 208/371 (56.06%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGTRKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENRE-EDSGATTRVAKVEGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDDGGEIDLLVAV 1110
            WAEAV +++Y LNR PT      TP+E  HG KP + HL++FGC  Y     ++R KL+++A   +F+GY +    YR+Y+P TK +  SR+V+FDED   +        D  +  E+  +   + PA    +    D +P+      R  R  ED       A +E +    EAV    K + W+ AME E   + +N TWE  +    P  +K +  +W+F+ K   DGS+ +YKARLVV+G+SQ  G DF ET APVAR+ T++ +F LAA+ D+++  +DV  A+LN  + EE+F++    F    ++   V RL K+LYGLKQ+ R W + +D +L  +G ++  +++ LY  R  G E  L+V++
Sbjct:  119 WAEAVNTSVYLLNRLPTHAVKDKTPFEAWHGLKPTVSHLKVFGCVCYAHIPVEKRNKLEERAVPVIFVGYSSTKKGYRVYNPSTKGILVSRDVKFDEDKIWS-----WNGDNAKLFEEDQSNDNLEPAEDEPSNEDFDDTPV------RGTRTIEDIYQRCNAALLEPS-DYEEAV----KDKHWKKAMEAELDMIHKNETWELVN---RPDHQKVIGVKWVFRTKYNADGSLNKYKARLVVKGYSQQYGIDFMETFAPVARLDTIKLLFALAAQKDWKVHQLDVKSAFLNGFLREEIFIEQPEGFKVQGQEDK-VYRLKKALYGLKQAPRAWYDRIDTYLSRLGFEKSVSEATLYVKRLKG-ETLLIVSL 468          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 217 bits (552), Expect = 1.970e-60
Identity = 133/357 (37.25%), Postives = 194/357 (54.34%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGT-RKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLT-EAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLY 1065
            WAEA+ +A+Y  NR+PT+   G TP+E   GEKPK+DHLRIFGCT Y      +R+KLD KA   + LGY  ++  YR+YD +   + FSR+V F+E +   +       DG   +  +F    P    S  +  +  +R   P          +  G    VA    T   T + V   P   KW+ AME+E  +L  N  W   +   LP  RKA+ ++W+FK K+  DG+  R+KARLV QGFSQ  G D+ ET +PV R  ++R +   A ++  +L  +DV  A+LN  ++EE+++Q    F    ++ L V +L +S+YGLKQS R WN  LD+ L  +G  + T D C+Y
Sbjct:   76 WAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSERLRKPP---------DYYGEWVTVASNPTTEPKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEHL-VCKLNRSIYGLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIY 419          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A8J5YXK5_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YXK5_9ROSI)

HSP 1 Score: 220 bits (561), Expect = 2.740e-60
Identity = 133/365 (36.44%), Postives = 201/365 (55.07%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGTRK--IEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLT---EAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDD 1080
            WAEAV +++Y LNR PT    G TP+E   G+KP + HLR+FGC  Y    +++R KL+ ++  GVF+GY +    YRI+DP TK +  SR+V+F+E+       G  K DGT    +E+    P + P    EA+   D    P R           G  T     E    +       ++  K + W+ A+E E   + +N TWE  +    P  RK +  +W+F+ K   DGS+  +KARLVV+G+SQ +G DFFET APVAR+ T+R +F LAA+  +++  +DV  A+LN  ++EE+F++    F  S      V RL K+LYGLKQ+ R W + +D +L  +G  +  ++  LY  +D+
Sbjct:  539 WAEAVNTSVYLLNRLPTNAVKGKTPFEAWFGQKPTMSHLRVFGCLCYALVPAEKRTKLEKRSMPGVFVGYSSVKKGYRIFDPLTKKIIVSRDVKFNEE-------GYWKWDGTNASLLEEDQNSPDLQPTE-IEAEVDDDYDDAPIR-----------GTRTLADIYERCAMIIVEPSCYAEVVKEKCWQEALEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGSLNEHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQKQWKVHQLDVKSAFLNGFLKEEIFIEQPEGFEVSGEKHK-VYRLKKALYGLKQAPRAWYDRIDVYLSRLGFTKSISEPTLYVKKDE 880          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A498NC17_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498NC17_LABRO)

HSP 1 Score: 208 bits (530), Expect = 1.040e-59
Identity = 130/362 (35.91%), Postives = 189/362 (52.21%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGT--RKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDD 1080
            WAEA+ +A+Y  NR+PT+   G TP+E   GEKP +DHLRIFGCT Y      +R+KLD KA   + LGY  ++  YR+YD +   + FSR+V F+E D           DG   R +E     P    +   + QR          AR R+  +      T  +         + V   P    W+ AME+E  +L     W   +   LP  RKA+ ++W+FK K+  DG+  R+KARLV QGFSQ  G D+ ET +PV R  ++R +   A ++  +L  +DV  A+LN  ++EE+++Q    F    ++ L V +L  S+YG KQS R WN  LD+ L  +G  + T D C+Y +  D
Sbjct:   76 WAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPTVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESDHAFKKEPVANEDGAVNRYVELDCQEPDNEESPEQKVQRS---------ARLRKPPDYYGEWVTIASNPTTEPKTVKDVLSSPDKANWKEAMEKEMESLYAISVWNRVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVTQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEHL-VCKLNHSIYGPKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAATD 424          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A151UDA6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UDA6_CAJCA)

HSP 1 Score: 206 bits (525), Expect = 1.260e-59
Identity = 134/371 (36.12%), Postives = 198/371 (53.37%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDED---DFVTDHRGQQKHDGTRKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDDGGEIDLLV 1104
            W EAV +A+Y LNR PT+     TP E   G KP   HLR+FG   Y+    ++R KL+DK   G+FLGY   S  YR+Y+ +TK L  SR+V  DE+   ++  +   +      ++ E+ ST  P  P S  + Q P   SP  T  R R    ED   T  +A +E      E+     K + W  AMEEE   + +N  W+  D    P  +  +  +W++K KL  DG++ ++KARLV +G+SQ  G D+ ET AP+AR+ T+RA+  LAAE  + +  +DV  A+LN  ++EE++V+    F S   +   V RL K+LYGLKQ+ R W + +D +    G  R  ++  LY      G+ D L+
Sbjct:   18 WGEAVYTAVYILNRCPTKVVQDKTPIEAWSGIKPSAKHLRVFGSICYIHVPEEKRHKLEDKTVRGIFLGYSTQSKGYRVYNLQTKKLIISRDVEVDENAAWNWNDEKVEKNIPISIQQPEEESTEVPSEPHSPPQQQTP---SPESTPRRVRSL--EDIYETCNLAILE-----PESFEATSKQQVWVKAMEEEIKMIEKNNIWDLVD---YPKDKDIIGVKWVYKTKLNLDGTIQKHKARLVAKGYSQQPGVDYNETFAPIARLDTIRALIALAAEKGWNIFQLDVKSAFLNGVLQEEIYVEQPQGFISKGNEDK-VLRLRKALYGLKQAPRAWYSRIDQYFTDHGFRRSKSEPTLYIKTQ--GQYDTLI 372          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A8J5Y6F8_9ROSI (Integrase catalytic domain-containing protein n=4 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y6F8_9ROSI)

HSP 1 Score: 218 bits (555), Expect = 1.620e-59
Identity = 134/371 (36.12%), Postives = 208/371 (56.06%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDFVTDHRGQQKHDGTRKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENRE-EDSGATTRVAKVEGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDDGGEIDLLVAV 1110
            WAEAV +++Y LNR PT      TP+E  HG KP + HL++FGC  Y     ++R KL+++A   +F+GY +    YR+Y+P TK +  SR+V+FDED   +        D  +  E+  +   + PA    +    D +P+      R  R  ED       A +E +    EAV    K + W+ AME E   + +N TWE  +    P  +K +  +W+F+ K   DGS+ +YKARLVV+G+SQ  G DF ET APVAR+ T++ +F LAA+ D+++  +DV  A+LN  + EE+F++    F    ++   V RL K+LYGLKQ+ R W + +D +L  +G ++  +++ LY  R  G E  L+V++
Sbjct:  643 WAEAVNTSVYLLNRLPTHAVKDKTPFEAWHGLKPTVSHLKVFGCVCYAHIPVEKRNKLEERAVPVIFVGYSSTKKGYRVYNPSTKGILVSRDVKFDEDKIWS-----WNGDNAKLFEEDQSNDNLEPAEDEPSNEDFDDTPV------RGTRTIEDIYQRCNAALLEPS-DYEEAV----KDKHWKKAMEAELDMIHKNETWELVN---RPDHQKVIGVKWVFRTKYNADGSLNKYKARLVVKGYSQQYGIDFMETFAPVARLDTIKLLFALAAQKDWKVHQLDVKSAFLNGFLREEIFIEQPEGFKVQGQEDK-VYRLKKALYGLKQAPRAWYDRIDTYLSRLGFEKSVSEATLYVKRLKG-ETLLIVSL 992          
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU)

HSP 1 Score: 215 bits (547), Expect = 5.040e-59
Identity = 136/375 (36.27%), Postives = 207/375 (55.20%), Query Frame = 1
Query:    1 WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTFQSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDE------DDF-VTDHRGQQKHDGTRKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARENREEDSGATTRVAKVEGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGEDFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQIASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTTDSCLYFSRDDGGEIDLLV 1104
            WAEA+ +A++ LNR+PT+     TP+E  H  KPK+D  +IFGCTAY    S++R K D+K    +F+GY + S +YR+ DPRTKSL  SR+V FDE      +++ +   R  ++ D +   E      P+ P++GT      D +P    AR R   +        ++ +E      +   +  K   W+ AM+EE   + +N TWE  D    P  +  +  +W++K K  EDGS+ ++KARLV +G+SQ  G DF ET APV R+ T+R V  LAA+   ++  +DV  A+LN  +EEE++V+    +    R+   V RL K+LYGLKQ+ R WNN +D +    G  R  ++  LY  ++  G  D L+
Sbjct:  312 WAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQSPI-PSAGTADPSSPDSTPR-LNARTRSLADIYESCDLALSALE-----PQKFEEAVKENIWQDAMDEEIRVIKKNRTWELVD---RPKSKDIIGLKWVYKTKFNEDGSIQKHKARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYVEKGREDK-VYRLRKALYGLKQAPRAWNNKIDHYFQQNGFTRSLSEPSLYLKKE--GTHDFLI 673          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22091.5846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5YMD5_9ROSI8.350e-6336.60Integrase catalytic domain-containing protein n=1 ... [more]
A0A151RWU2_CAJCA4.910e-6237.17Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7GU92_PARCT3.520e-6136.32Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J5ZME6_9ROSI1.210e-6036.12Integrase catalytic domain-containing protein n=1 ... [more]
A0A498M2F0_LABRO1.970e-6037.25Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J5YXK5_9ROSI2.740e-6036.44Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A498NC17_LABRO1.040e-5935.91Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A151UDA6_CAJCA1.260e-5936.12Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J5Y6F8_9ROSI1.620e-5936.12Integrase catalytic domain-containing protein n=4 ... [more]
A0A4Y1QWW3_PRUDU5.040e-5936.27Transposable element protein n=1 Tax=Prunus dulcis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22091contigH-paniculata_contig22091:2884..4263 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score207.2
Seed ortholog evalue1.3e-50
Seed eggNOG ortholog7070.TC009115-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,3SKEY@50557,41ZUZ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons2
Model size1122
Cds size1122
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929606.910346-CDS-H-paniculata_contig22091:2883..36211622929606.910346-CDS-H-paniculata_contig22091:2883..3621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22091 2884..3621 -
1691480933.460907-CDS-H-paniculata_contig22091:2883..36211691480933.460907-CDS-H-paniculata_contig22091:2883..3621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22091 2884..3621 -
1622929606.9197834-CDS-H-paniculata_contig22091:3879..42631622929606.9197834-CDS-H-paniculata_contig22091:3879..4263Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22091 3880..4263 -
1691480933.4739184-CDS-H-paniculata_contig22091:3879..42631691480933.4739184-CDS-H-paniculata_contig22091:3879..4263Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22091 3880..4263 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22091.5846.1prot_H-paniculata_contig22091.5846.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22091 2884..4263 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22091.5846.1

>prot_H-paniculata_contig22091.5846.1 ID=prot_H-paniculata_contig22091.5846.1|Name=mRNA_H-paniculata_contig22091.5846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=374bp
WAEAVRSAIYCLNRAPTRPHDGGTPYEKSHGEKPKLDHLRIFGCTAYVTF
QSKQRRKLDDKAWAGVFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEDDF
VTDHRGQQKHDGTRKIEDFSTPPPVTPASGTEAQRPRDRSPIPTRARARE
NREEDSGATTRVAKVEGTGSLTEAVSKGPKAEKWRAAMEEEWGALVENGT
WESEDPGRLPARRKALLTRWIFKRKLKEDGSVARYKARLVVQGFSQVEGE
DFFETSAPVARISTLRAVFRLAAEHDFELEGIDVDEAYLNASVEEELFVQ
IASEFSSSFRDILFVRRLGKSLYGLKQSGRNWNNTLDDFLVGIGLDRFTT
DSCLYFSRDDGGEIDLLVAVARK*
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mRNA from alignment at H-paniculata_contig22091:2884..4263-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22091.5846.1 ID=mRNA_H-paniculata_contig22091.5846.1|Name=mRNA_H-paniculata_contig22091.5846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig22091:2884..4263- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGCGGAAGCGGTGCGCTCGGCAATATACTGCCTAAATCGCGCACCGAC GCGACCGCACGACGGAGGAACACCGTACGAAAAATCGCACGGCGAGAAAC CAAAGTTGGACCACCTTCGCATCTTCGGCTGCACGGCATATGTTACGTTC CAGTCAAAGCAGAGACGCAAGCTCGACGACAAAGCATGGGCGGGGGTGTT CTTGGGGTACGATAACGACAGCCCGAGTTATCGCATATACGACCCGAGAA CCAAGAGCCTCCAGTTTAGTAGGAACGTGAGATTTGACGAAGATGACTTC GTAACCGATCATCGCGGACAGCAGAAGCACGACGGGACGCGCAAAATAGA AGATTTTTCTACACCACCGCCAGTCACGCCAGCGGTCACTCGATCCCGCG CCCAAGGCGAGTAAGGAAGCGTAACTAACACGGAAGACCGGACGTCGACG TCACAAATGCCGCCGACTTTGCCGGTACATTCGCTGCCAGCCGCCAGCGC AAACCCATTCAGTGTCTTGAGCGATGACGATGATGACGAAAATAACGGTG ACTCCACGATGAAGGATGCGGGGCCCGCAGTCAAAGACGCATCATCAGCA GGGACAGCCGCACTCGCGTCGCGGGGGAACACCACGAAGTAGTCAGGGAC GGAGGCGCAGCGTCCGCGAGATCGGTCACCGATACCAACACGGGCGAGAG CGAGGGAAAACCGCGAAGAAGATTCAGGCGCTACCACGCGCGTGGCTAAA GTGGAAGGCACCGGCAGCCTTACAGAGGCGGTATCTAAGGGTCCAAAGGC GGAAAAATGGCGCGCGGCAATGGAGGAAGAATGGGGAGCGTTGGTGGAAA ATGGGACATGGGAAAGCGAAGACCCGGGGAGGTTACCGGCAAGGCGGAAG GCGCTTCTTACGAGATGGATTTTCAAGCGGAAACTGAAGGAAGACGGCAG TGTGGCACGCTACAAAGCGCGACTAGTGGTTCAAGGTTTTTCACAGGTGG AGGGTGAAGATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATATCGACT TTACGTGCTGTTTTCCGCCTGGCCGCCGAACATGATTTCGAATTAGAAGG CATAGATGTAGATGAGGCGTATTTGAACGCCTCGGTAGAAGAAGAGCTGT TTGTTCAGATAGCCTCCGAGTTTTCCTCTTCCTTCCGAGACATACTGTTT GTGCGCCGCCTGGGTAAAAGCTTGTACGGCCTCAAGCAGAGCGGCCGAAA CTGGAATAACACTCTTGACGATTTTCTTGTTGGGATAGGACTCGACCGTT TCACTACCGACTCATGCTTGTACTTCTCTCGCGACGATGGGGGAGAGATA GACCTTCTGGTGGCCGTCGCGAGAAAGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig22091:2884..4263-

>mRNA_H-paniculata_contig22091.5846.1 ID=mRNA_H-paniculata_contig22091.5846.1|Name=mRNA_H-paniculata_contig22091.5846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2244bp|location=Sequence derived from alignment at H-paniculata_contig22091:2884..4263- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGCGGAAGCGGTGCGCTCGGCAATATACTGCCTAAATCGCGCACCGAC
GCGACCGCACGACGGAGGAACACCGTACGAAAAATCGCACGGCGAGAAAC
CAAAGTTGGACCACCTTCGCATCTTCGGCTGCACGGCATATGTTACGTTC
CAGTCAAAGCAGAGACGCAAGCTCGACGACAAAGCATGGGCGGGGGTGTT
CTTGGGGTACGATAACGACAGCCCGAGTTATCGCATATACGACCCGAGAA
CCAAGAGCCTCCAGTTTAGTAGGAACGTGAGATTTGACGAAGATGACTTC
GTAACCGATCATCGCGGACAGCAGAAGCACGACGGGACGCGCAAAATAGA
AGATTTTTCTACACCACCGCCAGTCACGCCAGCGTGGGCGGAAGCGGTGC
GCTCGGCAATATACTGCCTAAATCGCGCACCGACGCGACCGCACGACGGA
GGAACACCGTACGAAAAATCGCACGGCGAGAAACCAAAGTTGGACCACCT
TCGCATCTTCGGCTGCACGGCATATGTTACGTTCCAGTCAAAGCAGAGAC
GCAAGCTCGACGACAAAGCATGGGCGGGGGTGTTCTTGGGGTACGATAAC
GACAGCCCGAGTTATCGCATATACGACCCGAGAACCAAGAGCCTCCAGTT
TAGTAGGAACGTGAGATTTGACGAAGATGACTTCGTAACCGATCATCGCG
GACAGCAGAAGCACGACGGGACGCGCAAAATAGAAGATTTTTCTACACCA
CCGCCAGTCACGCCAGCGTCAGGGACGGAGGCGCAGCGTCCGCGAGATCG
GTCACCGATACCAACACGGGCGAGAGCGAGGGAAAACCGCGAAGAAGATT
CAGGCGCTACCACGCGCGTGGCTAAAGTGGAAGGCACCGGCAGCCTTACA
GAGGCGGTATCTAAGGGTCCAAAGGCGGAAAAATGGCGCGCGGCAATGGA
GGAAGAATGGGGAGCGTTGGTGGAAAATGGGACATGGGAAAGCGAAGACC
CGGGGAGGTTACCGGCAAGGCGGAAGGCGCTTCTTACGAGATGGATTTTC
AAGCGGAAACTGAAGGAAGACGGCAGTGTGGCACGCTACAAAGCGCGACT
AGTGGTTCAAGGTTTTTCACAGGTGGAGGGTGAAGATTTCTTTGAAACCA
GTGCCCCCGTAGCTCGCATATCGACTTTACGTGCTGTTTTCCGCCTGGCC
GCCGAACATGATTTCGAATTAGAAGGCATAGATGTAGATGAGGCGTATTT
GAACGCCTCGGTAGAAGAAGAGCTGTTTGTTCAGATAGCCTCCGAGTTTT
CCTCTTCCTTCCGAGACATACTGTTTGTGCGCCGCCTGGGTAAAAGCTTG
TACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACACTCTTGACGATTT
TCTTGTTGGGATAGGACTCGACCGTTTCACTACCGACTCATGCTTGTACT
TCTCTCGCGACGATGGGGGAGAGATAGACCTTCTGGTGGCCGTCGCGAGA
AAGTAGTCAGGGACGGAGGCGCAGCGTCCGCGAGATCGGTCACCGATACC
AACACGGGCGAGAGCGAGGGAAAACCGCGAAGAAGATTCAGGCGCTACCA
CGCGCGTGGCTAAAGTGGAAGGCACCGGCAGCCTTACAGAGGCGGTATCT
AAGGGTCCAAAGGCGGAAAAATGGCGCGCGGCAATGGAGGAAGAATGGGG
AGCGTTGGTGGAAAATGGGACATGGGAAAGCGAAGACCCGGGGAGGTTAC
CGGCAAGGCGGAAGGCGCTTCTTACGAGATGGATTTTCAAGCGGAAACTG
AAGGAAGACGGCAGTGTGGCACGCTACAAAGCGCGACTAGTGGTTCAAGG
TTTTTCACAGGTGGAGGGTGAAGATTTCTTTGAAACCAGTGCCCCCGTAG
CTCGCATATCGACTTTACGTGCTGTTTTCCGCCTGGCCGCCGAACATGAT
TTCGAATTAGAAGGCATAGATGTAGATGAGGCGTATTTGAACGCCTCGGT
AGAAGAAGAGCTGTTTGTTCAGATAGCCTCCGAGTTTTCCTCTTCCTTCC
GAGACATACTGTTTGTGCGCCGCCTGGGTAAAAGCTTGTACGGCCTCAAG
CAGAGCGGCCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGAT
AGGACTCGACCGTTTCACTACCGACTCATGCTTGTACTTCTCTCGCGACG
ATGGGGGAGAGATAGACCTTCTGGTGGCCGTCGCGAGAAAGTAG
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