mRNA_H-paniculata_contig22054.5838.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 230 bits (587), Expect = 1.900e-69 Identity = 140/248 (56.45%), Postives = 163/248 (65.73%), Query Frame = 1
Query: 25 ANRGIYPGVEYRILEISMGLEREEEQQDRVGREGEEGKARGNGGD-------------------------------DGPASEQLGSAKEAPEGAFDDGKLVFTMRPVYPLVKRLER-PWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRASLIRRNDIVFFSPPPALRQAVADVGGTLTFRDLFVKRIVALPGDVVTVNTNGEVKAR 672
+N+GIYPGVEYRILEIS+ R G+ KA + D + L SA++AP +FDDG LVFTMRP+YPLV RLER WPV+VPAREFPVMLTPFSYNAATAWAA TTSLS L+VGFVLSQALT+SVI SHSMEPTLQV DVVLVEKVSR+ L++ NDIV+F PPP L+ V+ GGTL+ DLFVKR+ AL GD VTV+ +G V R
Sbjct: 166 SNQGIYPGVEYRILEISVFPTA------RTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVR 407
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.050e-43 Identity = 91/165 (55.15%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 181 LGSAKEAPEGAFDDGKLVFTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRASLIRRNDIVFFSPPPALRQAVADVGGT-LTFRDLFVKRIVALPGDVVTVNTNGEVKAR 672
L S +AP AF+ G L+ +RP+YPL+ RLER WPV V AR+ P+ LT F+YN ATAWAAL LT+S IPS SMEP L+ DVVLVEKVSR +L+RR ++VFF+PPPALR AVAD GG L DLFVKR+ AL GD V V +GE + R
Sbjct: 20 LDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVR 184
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.310e-35 Identity = 78/146 (53.42%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 235 FTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRASLIRRN---DIVFFSPPPALRQAVADVGGTLTFRDLFVKRIVALPGDVVTVNTNGEV 663
+ ++PVYPLV +LERPWPV+V R+ P + TP YN +A+ +L T+ S L V F+LSQA+++ IPS SM+PTL+V DV+LV+KVS + R+N D+V FSPP L++ VA GG L+ RDLFVKRI A PGD VTV +G+V
Sbjct: 394 YELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKV 539
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC) HSP 1 Score: 128 bits (321), Expect = 1.430e-30 Identity = 75/150 (50.00%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 235 FTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRA-----SLIRRNDIVFFSPPPALRQAVA-DVGGTLTFRDLFVKRIVALPGDVVTVNTNGEVK 666
+ ++PVYPLV++LERPWPV+V R+ P +LTP YN +A +L T+L+ L V FVLSQA+++ VIPS SM PTL DVVLV+K++ + I D+VFF PP L+ V G L RDLFVKR+ A PGDV+TV+ +G V+
Sbjct: 354 YELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVR 503
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 116 bits (291), Expect = 2.890e-28 Identity = 69/155 (44.52%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 208 GAFDDGKLVFTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRASLIRRN---DIVFFSPPPALRQAVADVGGTLTFRDLFVKRIVALPGDVVTVNTNGEV 663
G+ GK + ++P+YPLV +LERPWPV V E P + T YN +A +L T+ L V + LSQ +++ IPS SM+PTL V DVV+VEKVS N D++ F PP L++ V GG + RDLFVKR+ A P VTV ++G+V
Sbjct: 13 GSVPGGK--YDLKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKV 165
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A7S1BHK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHK1_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.370e-28 Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 1 WLNNAQNLANRGIYPGVEYRILEISMGLEREEEQQDRVGREGEEGKARGNGGDDGPASEQLGSAKEAPEGAFDDGKLVFTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRASLIRR---NDIVFFSPPPALRQAVADVGGTLT 588
++ +++ +G+YPGVEYR+L I + E + FD + + ++PVYPLV +ER WPV++ +E ++TP YN TA+ A++T++STL F++S A+++ IPS SM+PTL+V DV+LVEK+S + R D+V F PPPALR VA GG LT
Sbjct: 61 FMERREDMFRKGVYPGVEYRVLRILAEKD----------------------------XXXXXXXXEDVDLFFDQPGVDYEVKPVYPLVASMERQWPVRIAEKELTKIITPLQYNILTAFGAVSTAVSTLVTFFLISLAVSLFFIPSKSMDPTLRVGDVLLVEKISPRLPLHRYAVGDVVMFRPPPALRDIVARNGGRLT 231
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN) HSP 1 Score: 114 bits (284), Expect = 1.350e-26 Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 1
Query: 202 PEGAFDDGKLVFTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRA-SLIRRNDIVFFSPPPALRQAVADVGGTLTFRDLFVKRIVALPGDVVTVNT 651
PEGA G++ ++RP+YPL KRLERPWPV V + + P LT YN+ T S+S + +A++ IPS SMEPT+ D++L EK+S +R +I+ F+PP +L+ V GG + RDLF+KR+ ALPGDVVTV+T
Sbjct: 102 PEGA---GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDT 249
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO) HSP 1 Score: 111 bits (278), Expect = 7.130e-25 Identity = 66/147 (44.90%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 235 FTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVS-----RASLIRRND----IVFFSPPPALRQAVADVGGT-LTFRDLFVKRIVALPGDVVTV 645
+ ++P+YPLV++LER WPV+V R+ P + TP YN +A +L T+++ L F++SQA++I VIPS SMEPTLQV DV+LV+KV+ + +L + ND I+ F P +L+ V GG LT R+LFVKR+ A PG + +
Sbjct: 264 YELKPIYPLVQQLERLWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKI 410
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A7S4C1M9_CHRCT (Mitochondrial inner membrane protease subunit n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1M9_CHRCT) HSP 1 Score: 106 bits (265), Expect = 1.280e-23 Identity = 70/156 (44.87%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 220 DGKLVFTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVSRA--SLIRRNDIVFFSPPPALRQ------AVADVGGTLTFRDLFVKRIVALPGDVVTVNTNGEV 663
+G + +RP Y L+ +LER WPV+VP P +TP YNA A AL +L+ L S LT+SVI S SM PT+ DV+LVEKVSR + +RR D+VFF PP LR+ A A V + LFVKR+VA DVV V+ +G V
Sbjct: 139 NGPAILRVRPEYALIPKLERNWPVRVPVSVSPDWMTPSGYNAQVAIFALGLALTGLLGALAASTVLTLSVITSTSMAPTILPRDVLLVEKVSRRFHAPLRRGDLVFFEPPAELREIVRARAAAAGVAEPRRYGRLFVKRVVAAEDDVVGVDDHGHV 294
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO) HSP 1 Score: 105 bits (261), Expect = 5.080e-23 Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 235 FTMRPVYPLVKRLERPWPVQVPAREFPVMLTPFSYNAATAWAALTTSLSTLAVGFVLSQALTISVIPSHSMEPTLQVNDVVLVEKVS-----RASLIRRND----IVFFSPPPALRQAVADVGGT-LTFRDLFVKRIVALPGDVVTV 645
+ ++P+YPLV++LER WPV+V ++ P + TP YN +A +L T++ L F++SQA++I VIPS SMEPTLQV DV+LV+K++ + +L + ++ IV F P +L+ V GG LT R+LFVKR+ A PG + +
Sbjct: 132 YELKPIYPLVQQLERLWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKI 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22054.5838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22054.5838.1 >prot_H-paniculata_contig22054.5838.1 ID=prot_H-paniculata_contig22054.5838.1|Name=mRNA_H-paniculata_contig22054.5838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp WLNNAQNLANRGIYPGVEYRILEISMGLEREEEQQDRVGREGEEGKARGNback to top mRNA from alignment at H-paniculata_contig22054:1142..3798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22054.5838.1 ID=mRNA_H-paniculata_contig22054.5838.1|Name=mRNA_H-paniculata_contig22054.5838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2657bp|location=Sequence derived from alignment at H-paniculata_contig22054:1142..3798- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22054:1142..3798- >mRNA_H-paniculata_contig22054.5838.1 ID=mRNA_H-paniculata_contig22054.5838.1|Name=mRNA_H-paniculata_contig22054.5838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig22054:1142..3798- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |