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Homology
BLAST of mRNA_H-paniculata_contig2205.5836.1 vs. uniprot
Match: D7FPG7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG7_ECTSI) HSP 1 Score: 341 bits (874), Expect = 3.000e-109 Identity = 179/260 (68.85%), Postives = 210/260 (80.77%), Query Frame = 2
Query: 2 DAYWVEYGHSWVMKYAKASDVRVVLLGLLALVSFFAYGVQHTRYTTAVKYLRKAAERNLGPKQGGNAATMQLRRDAEALLVERK--AAEGKKNG----GSKT-KQGRKEKEAELALVIEELAMQVEIKGSCHKPTWEDQPIVMLARLPVNISTYMVHKGKLVSTQLLKTELSKSEREYWARQQVGDSTWEDLDDEARDAAVDGDAWREVEALKKWKDEYLYGGGAQTKSKGLRQRKKTNPAMANGDLMKSVLGGGPSVEY 760
DAYW+EYGH WVM+YA ASDVR VLLGLL LVSFFAYG+QHTRYTTAV+YLRKAAE+NLGPK GGNAATMQLRR+AEALL ERK A GKKNG GSK KQ RKEKEAELA VI EL++QVEIKGSC KPTW DQP+V+LA LPV+ +TY+ HK +LV+++L K E++ SEREYWAR+ VG STW+DLD E R A +GDAWR EA++ WK+ +LYGGGA + SKGLR+R K +A+G +MK VLG GP VEY
Sbjct: 112 DAYWLEYGHHWVMRYASASDVRGVLLGLLVLVSFFAYGIQHTRYTTAVRYLRKAAEKNLGPKSGGNAATMQLRREAEALLAERKGEAQGGKKNGVGSKGSKVVKQSRKEKEAELAEVIAELSLQVEIKGSCRKPTWRDQPVVLLAMLPVHTATYLWHKFQLVTSKLTKREVTASEREYWARRSVGSSTWDDLDAETRATASEGDAWRGGEAMEDWKEAHLYGGGATSSSKGLRKRNK----VASGSMMKGVLGEGPEVEY 367
BLAST of mRNA_H-paniculata_contig2205.5836.1 vs. uniprot
Match: A0A482UVG0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UVG0_9ARCH) HSP 1 Score: 57.0 bits (136), Expect = 1.480e-6 Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 2
Query: 56 SDVRVVLLGLLALVSFFAYGVQHTRYTTAVKYLRKAAERNLGPKQGGNAATMQLRRDAEALLVE 247
SDVRV++L ++AL+S+F + VQ+++Y AVK +++A E NL K GG T++L R A + E
Sbjct: 27 SDVRVIILVVVALLSWFFHSVQYSKYQRAVKLIKRATENNLSLKNGGTKQTIELYRRASEMYDE 90
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 315.8 |
| Seed ortholog evalue | 1.7e-83 |
| Seed eggNOG ortholog | 2880.D7FPG7 |
| KEGG ko | ko:K09515,ko:K19371 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0098827 |
| EggNOG free text desc. | DnaJ molecular chaperone homology domain |
| EggNOG OGs | COG0484@1,KOG0722@2759 |
| Ec32 ortholog description | Heat shock protein 40 like protein/ DnaJ domain containing protein |
| Ec32 ortholog | Ec-14_004870.1 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03110 |
| Exons | 6 |
| Model size | 1766 |
| Cds size | 726 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2205.5836.1 >prot_H-paniculata_contig2205.5836.1 ID=prot_H-paniculata_contig2205.5836.1|Name=mRNA_H-paniculata_contig2205.5836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MKYAKASDVRVVLLGLLALVSFFAYGVQHTRYTTAVKYLRKAAERNLGPK
QGGNAATMQLRRDAEALLVERKAAEGKKNGGSKTKQGRKEKEAELALVIE
ELAMQVEIKGSCHKPTWEDQPIVMLARLPVNISTYMVHKGKLVSTQLLKT
ELSKSEREYWARQQVGDSTWEDLDDEARDAAVDGDAWREVEALKKWKDEY
LYGGGAQTKSKGLRQRKKTNPAMANGDLMKSVLGGGPSVEY* back to topmRNA from alignment at H-paniculata_contig2205:15065..21160- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2205.5836.1 ID=mRNA_H-paniculata_contig2205.5836.1|Name=mRNA_H-paniculata_contig2205.5836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6096bp|location=Sequence derived from alignment at H-paniculata_contig2205:15065..21160- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGCCTACTGGGTGGAGTACGGGCACAGTTGGGTAATGAAGTACGCTA
AAGCTAGCGACGTCCGCGTTGTCCTGCTGGGACTTTTGGCGCTGGTTTCC
TTCTTTGCCTATGGCGTTCAGCACACGCGCTACACCACGGCCGTCAAGTA
TTTGAGAAAAGCGGCTGAGAGGAATTTGGGGCCGAAACAAGGGGGCAACG
CCGCGGTAAGACTGCAAATGACACTGGCCCGAAAGATTGAAATATTGCGA
CGGGGAGGGAGGGAAGGGGGGGGGAAGGAGGTGGGATGGATTGAATTTCC
CTGTTTGTCGGCGTGTCAAGAGGGTGCCGTGATTCAACACTTCGGAGGGC
GGCTATTTGTCGGGAGCAATGCCGTACGTCCGTTCGAGTTCAAGAAGGTA
GTAGTTGGCTATGGCTGTGACCCCGAAGCAGCCAATGGGTTGAAAATAAA
ACAGTGTGACAATGTTGCATTTGTGTGTGTGTGTGTATGTGTGTGTGCTT
GGTGAGACGCGGCTGCGCTGTCCGGGACTAATATATCGCCCTTGGTGTGT
CTCTGTCACTGGCCCCCACAGACGATGCAGCTTCGGAGGGATGCGGAAGC
CTTGCTGGTGGAGCGCAAAGCTGCGGAAGGCAAAAAGAACGGAGGTGTGT
ATATGTACGCCAACACCTGTCACGCTGTTCCGGAGACTAATTTTCGTCTA
CCCCTAGGGCGCTGGCACGCCATTGTTCAATGAGCGGTGCATCCTAGGTA
ACTGGGTAGGGCATATGATGGAGATAGGGCCCGCCAAACCCTGTAATTGG
GGGATACGTTAGATAGCTATCAAAAGCCGATTTTGTTGCTCCGGTCAGCA
AGATCGGTCAAACCACAGTACTAGCCAAATCAAGTACTAATGTCGGTTTT
CCAAGCAAAAAAATCGTAGGTACAGCAAAATTCGAAGGAATCACGATGCT
TTTGACAACATTCCACCCTATTCGGCGCCGATCCTTGATCAACGCTGGTC
AAAACGAGGGTTTCACCGTGCCGGTGTGCTCTTGCAAAACCGAAGTGCTG
CGATGTAAGTATTCAGTGCGGTCGGTAGCGCTACATGAGCTATCTACTGC
TCTATCAAGGATTGGCTGTGCATGCCGTACCTCGCTTTTCCGCCCATAAG
TTGCTCAGCGAAAGGGTCAGGAAAGCGGATGTATTGGAATGAGACACTTG
ACTTATTCGGATATAGCTAAAATATGTGGTCCTTGTTTTATTTCAAAATA
TCCTACGTCCCTCTTTCTCTCCTTAACATCAAGGTCAGTTACCGCGGTGG
ATGTCCATACGCAAATTCTGCTGAAGTGATCAATCTTTGAGATATCTATT
TTTATTTTTATTTTTCTGTCAGGGAGCAAGACTAAGCAAGGGCGCAAGGA
GAAGGAAGCCGAGCTGGCTTTGGTAATAGAGGAACTTGCGATGCAGGTTG
AGATCAAGGGTAGCTGCCACAAGCCCACGTGGGAGGATCAGCCAATCGTC
ATGCTCGCTAGACTTCCCGTTAATATTTCCACGTGAGGACAGCGAATTGG
GGAGCTTAAGATTATGGATGCGGAGAGTCAAGAGGGATACGGGGTTGGAG
GTTGGGAGGGTAGGGTCAGTGATGGGCGAGATACTTTTGGGGGGACTGAG
GAGGTTGCTGGTGATATTAATGTGTTTTCCTCAAGCTCCTCTAGAGTTAA
AGCGTGTATTTATGCGTTACATGAAGAGTTTGAAAGGGAGCTGTAATTTG
TTCGATCGGGTTTCAAAATTACGGCGTGAGGTCGTTGGCCTGCTCGAGCC
GGAGATGACAAACGTAGCAACTTAGTTTGATGCCCCATGCGCTGCTGCGT
GTGCCCCGTCCTGTAGATACATGGTGCACAAAGGAAAGCTAGTCTCGACG
CAACTATTGAAAACGGAGCTGTCCAAGTCAGAGCGCGAGTACTGGGCCCG
CCAGCAGGTTGGGGACAGCACTTGGGAAGACCTTGACGATGAGGCTAGGT
GAGAGGAAATCTATCTGTGAGCGGCAAGAAGATTATTGGTACCTGTATGT
CACTTTACTGGAGGTCTGGCGCTAACGTAGCACTGCAGCACGCGTTGAGA
GAAGGGAATGATGCTGGTGGCCGGTAGTTCTTATGTGGAGAGACTGTTGA
TGTGTTCTGTCATTACAGTACGTGGTCGGGGTGGCGAGCCCCGGAGAAGG
CGCTGTTCTGCCGTTGTCCTTCATTATTGCCCTACCGCTCTTACGTCGAG
GCAACCTGCAGAGTAGTTATCCGTTTTGTTGTATTAACAATGCTGCTTGC
TTACGAGTTCACAAGAGCCAATAGCGCGCAGAGCGCAAAGCATCGCACGA
CGGGGCACGAGCACGAACGGGTGCAAATGGCAGTCACCGTCAATGCTCAG
AGTGAAAATACCATGGTCGCACGTACGTTCACCTAAAAAGATGTCCTCAC
CAACATGTACTAGCGAAATATTGATCTCTCTCACACGGATGCAGTGGTTA
AACCACACTGTAGTGGTGGGGCACCTGGGCTTCTCTCAATGTCTCACCCT
TATAAGTGCCTCGCTCGTCCCGTCAACAAGAGTAGCGCACCAGCAATGCA
GTAGTAAGGGCTGAGTTGGGCATACTATACAGTCCCTGAAGACGGTGAAA
AATGCAAGAAAGCGGAGGCGCACTACAGGCTGTGGAAAATGGCAACGTAG
GTAAGAGCGAATGGTCATCGGATTCGCTCTGATAGAAACAAAGCATCGTC
CTTCCGAAGATAGGTGGTCAATGGTTTAACAACACATACATGCAAAACAC
GAGTACGTTGCCACCCTCCGCACGTCCAAAACAAGAGCAGCACCTCCGCT
TCAAAAGAGTAAAACAACGAGGAGCAGACAAGAAGGTACCGACAGGGAGG
GGCGCGGGGGGAGGATGAGTGGTTAAAAGGTTGTGACACCCAACAATGGA
GCCCATGGCAAGAACTCGTCAGTACCCACACAACGTTGTATGAAGGTAAA
TGACGAATGAACAGGAGACATGAAGTGAAGACAGCTAACCCGAATATTGT
TACGCCGGATAGAGAAAACGAGACAGCTAGCAGGCAATTGTAGAAATGGT
GATCTCTCTAAGTGCCATTGAATCAGCAACCGCCGTCGCTAGACTTCAGT
ACTTTTCATGTAACATGTAATAAGCGACAACCCCCCCCCCGCCACGTTGG
GAACATCGATCCATGATGACGATCTACCGTAACGTTGCTAACGAAGGTGG
CCTTATTGCCGTGGGTGCACTTCGACGTCTTGCCTCCAACTCCTCTTTAG
AGGCAGGATTCTGCACTGCTGGTATGGAGTACCTTGTGCCGCCCTTGGTG
TCGGTGGTGGCGTATCCGCGCGATAAATCCAGATGCATGGGTACATGACA
CAAGAGAAGAGAAACGACACACTTGTCGTCACCATGGTTACAGGGCACGT
TTCGAGCGGTTGCAAATGGGGCGGCAAAACACTTGGCCGCTCCATCTCCA
TCGGTGACCTGCTCTGCGCTGTGGGAACGGCCTTTGAGTGGTGCATTGCA
TACTCGTGTTACCTACGGTATGCCTCCCTGGTATTACCCCCAACGGTCTA
CACCGTCCCAATTTCGCTCAGAGACATGATGAATTCCCGAGCACAGCCTG
CTAGAGGCAGCAGCCGCAGTAGTTCTGCGTACGTGCCGCATGGTATTCAT
GCCGGGCTGAATGTTAGTACCATCGATGCCCACCTGTGAATCCGCGGAGT
CACCCGCGGCAAGCAGGGTTTTGATGACGTGATACACCGCAAAAGTGACA
ACTGCAAAATGCTGCAAGGGTCTACGTTGCAAAGGCTAGATCCATTTTCA
GGCGGAAATACTCTTGCCGTGAGCTTAAGCTCCTTCCCTCACAACGCTTC
CGAGTGGTGCATACAGAGGGTGTACACTCTGGGGTGGAAAGGAAAGGCGC
AAATACTCGCCCATCAAAACCTACCGCGTCGATTTCCAGTCGGGGTAGAA
ACGGCTCGTTCAGACAGGTTGGAATACTCTCATGTACCAGTGTACTTATC
CAGAGATGTCATGATTATCATGCACTCGAGAATCTTGGAGTAGAATATAA
ATTTGTGTAATTTGGTTGATCTAGCATTAAAGATCCATACACCTACACGT
GCATATCTTGGAGCGACTTGATCCTAGATCGCCTTGCTGCCAAACGCAAC
ATACCTGACCTTGAATCACATATATGTCCTGAACATTGACTTGCAGATTG
TTGAACATCTTCATCGGTAATTACCCTCACGTGCTAGTCACCACCCGATT
CATCCACAAAAAGCCGAACAAAACCCAATTCACCACTGCGAAGATAATAC
ATTGAAATATTATATACCCAGTCTCGTTTTGAATAACATCATACTACTGG
AATTCAGGAGCGCGGGGGCAGCGAGAGAGACCCGAGAAATCTCGAATTGC
AGTAGACTTGTCCTTGCTGAGTTTCCACCGTTGCCGTCACGTGTTGTCGG
AATCGTGCGTATTTACATGAATTTATACGGATAAGCAGGATGTGCCCAGA
TGACCGTATGAACCAGTGGTGGCCGACGTCTCACTGAGGCAAAGCGTAAA
GTAAAATAAATCGACACACATGACAGCTAGAACACATTCTCCCATCTCGC
GGCGTGTCTATATGGTTGCAACGCCCCCACCCGCGCCATTTCCCTCACAG
GGATGCGGCGGTCGACGGAGACGCATGGAGGGAGGTAGAAGCGTTGAAAA
AATGGAAAGACGAGTACCTATACGGCGGTGGTGCCCAGACGAAATCCAAG
GGGCTGCGTCAGCGCAAGAAAACTAACCCGGCGATGGCGAACGGTGATTT
GATGAAGAGCGTTCTTGGAGGGGGGCCAAGCGTAGAGTACTGATTTCAAT
TAAACTCTTGGGGCACGAGCATTTGGGTGACTGGACAGGGACCCTGCCTG
AGTGCGGAGCGAGGAGAGAATGTGTGCCTATGAGGCCTATCATAGGATGC
CATCATCCGAGAGCGGACGAGTCCTTTTTGGCGGAGATTATGCCGGGCGT
TGCTGGCGTCGTGTATCCACTTCTCTACTGTCCGCTGCTGGGATTACTGT
AGTGTTACTATGGCGGTGAAAATACTGTTCTGTTCGCGTCGCTACTCTTG
AATCCAGTACTTGGTTCTCATATTGCAAAGATAAACACGATAGAAAAAGG
CGTGCAAGCGTCTAAATGGGTGACAGTTACCCCCATTCTCCGTGCTCAAA
ATGACTCGTTTTAAGAATAGTCGACGGTAATCTGGGATCGCTTTCTGTTA
TCTGTTGTAGGCCTGCGTGCGTTGCCGATGTTCGGGGACAGAAATACATA
ACCCTGCACTGGAAGGTTTTCGTCCATGCATTTTTTTGTGTCTCTGGTTT
AGCGGAGGCGTTTTCGTGTTTATTTCTCCTGACGAGACCATTGTCGGTGG
TAAAGATTTTTTGTCCTTGAGGAAGAAGTGCGACTTCCACGATATTCATC
CATTTCTTCTTGCTAAGTCGACAACTCGTGATTGGTACGTACTCAAGCCG
GTTTCACTATTGGCGAAACGGTACTACTGCCGTGAACACCTCGGGATGCT
GCCCAGTTGACCATTTGAAATTTGTCTCGGAATACTCTAGATGGCAGTTG
TATGTCCATCTCTGTCGTTTGCACACGAAAGCGACTCTACTCATCCTTCG
CCACTGGTAAACAATGTGCCGCCCCTTGAGTGAAGGGCTCTCGATTGAGA
ACAAGCTGCGCTATTCCCCCCCTCGCACTTTCGCCGCATTGGCCCACTAT
CTGGAGGAAACGGCGCTCATCGCCTCGAGAAACGGCACCCTGTACCTGCC
CAAGCAAAAAAGCACATGACTGGGTGAGTAAAACATGGAGTTTCGAGATG
CGTGAAGCACTACATATGTGCTGCCTGCTGTTGGAGAGTTAATCATGCAA
CTGGTATATGTTTACACGTGGATTTGTAAGTGACACCCATCGTTGTAAAC
GCGCCGTATATTGCAAGATCGTGGGTGCGCATGCCACATACCTGCTCCGC
AAGCGCAGCGCTTAAGCCGGGAGGTAGTTTTTTTGTGTCTTCGATG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2205:15065..21160- >mRNA_H-paniculata_contig2205.5836.1 ID=mRNA_H-paniculata_contig2205.5836.1|Name=mRNA_H-paniculata_contig2205.5836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1452bp|location=Sequence derived from alignment at H-paniculata_contig2205:15065..21160- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTACGCTAAAGCTAGCGACGTCCGCGTTGTCCTGCTGGGACTTTT
GGCGCTGGTTTCCTTCTTTGCCTATGGCGTTCAGCACACGCGCTACACCA
CGGCCGTCAAGTATTTGAGAAAAGCGGCTGAGAGGAATTTGGGGCCGAAA
CAAGGGGGCAACGCCGCGATGAAGTACGCTAAAGCTAGCGACGTCCGCGT
TGTCCTGCTGGGACTTTTGGCGCTGGTTTCCTTCTTTGCCTATGGCGTTC
AGCACACGCGCTACACCACGGCCGTCAAGTATTTGAGAAAAGCGGCTGAG
AGGAATTTGGGGCCGAAACAAGGGGGCAACGCCGCGACGATGCAGCTTCG
GAGGGATGCGGAAGCCTTGCTGGTGGAGCGCAAAGCTGCGGAAGGCAAAA
AGAACGGAGACGATGCAGCTTCGGAGGGATGCGGAAGCCTTGCTGGTGGA
GCGCAAAGCTGCGGAAGGCAAAAAGAACGGAGGGAGCAAGACTAAGCAAG
GGCGCAAGGAGAAGGAAGCCGAGCTGGCTTTGGTAATAGAGGAACTTGCG
ATGCAGGTTGAGATCAAGGGTAGCTGCCACAAGCCCACGTGGGAGGATCA
GCCAATCGTCATGCTCGCTAGACTTCCCGTTAATATTTCCACGGAGCAAG
ACTAAGCAAGGGCGCAAGGAGAAGGAAGCCGAGCTGGCTTTGGTAATAGA
GGAACTTGCGATGCAGGTTGAGATCAAGGGTAGCTGCCACAAGCCCACGT
GGGAGGATCAGCCAATCGTCATGCTCGCTAGACTTCCCGTTAATATTTCC
ACATACATGGTGCACAAAGGAAAGCTAGTCTCGACGCAACTATTGAAAAC
GGAGCTGTCCAAGTCAGAGCGCGAGTACTGGGCCCGCCAGCAGGTTGGGG
ACAGCACTTGGGAAGACCTTGACGATGAGGCTAGATACATGGTGCACAAA
GGAAAGCTAGTCTCGACGCAACTATTGAAAACGGAGCTGTCCAAGTCAGA
GCGCGAGTACTGGGCCCGCCAGCAGGTTGGGGACAGCACTTGGGAAGACC
TTGACGATGAGGCTAGGGATGCGGCGGTCGACGGAGACGCATGGAGGGAG
GTAGAAGCGTTGAAAAAATGGAAAGACGAGTACCTATACGGCGGTGGTGC
CCAGACGAAATCCAAGGGGCTGCGTCAGCGCAAGAAAACTAACCCGGCGA
TGGCGAACGGTGATTTGATGAAGAGCGTTCTTGGAGGGGGGCCAAGCGTA
GAGTACTGAGGATGCGGCGGTCGACGGAGACGCATGGAGGGAGGTAGAAG
CGTTGAAAAAATGGAAAGACGAGTACCTATACGGCGGTGGTGCCCAGACG
AAATCCAAGGGGCTGCGTCAGCGCAAGAAAACTAACCCGGCGATGGCGAA
CGGTGATTTGATGAAGAGCGTTCTTGGAGGGGGGCCAAGCGTAGAGTACT
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