prot_H-paniculata_contig22045.5832.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig22045.5832.1
Unique Name	prot_H-paniculata_contig22045.5832.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	180

Homology

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A6H5KVJ9_9PHAE (Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVJ9_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 1.010e-114
Identity = 160/182 (87.91%), Postives = 171/182 (93.96%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPN--REGEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+VEWVEKEPSYFFKLSEWQ+PLL+FY +NP FIAPESRRNEA+SFVSGGL+DLSISRTSFSWGVPVPGDD+HVMYVW+DALANYISALG+P     GEF +FWPADLHVIGKDILRFHSVYWPALLLAAGLEPP RLFVHGWWTKDGQKISKSTGNVIDPLDLV +YGVD TRYFLMSEV
Sbjct:  213 GAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPTRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEV 394

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A7S2H077_9STRA (Methionine--tRNA ligase n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H077_9STRA)

HSP 1 Score: 316 bits (809), Expect = 6.240e-105
Identity = 142/182 (78.02%), Postives = 161/182 (88.46%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNRE--GEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+VEWV KEPSYFFKLSE++  LLE+YEKNP+FIAPESRRNE + FV  GL+DLSISRT+F WGVPVPGDDDHVMYVWIDALANYISALGYPN E   EFD+FWP  LHV+GKDILRFH++YWPA L+AA L  P+RLF HGWWTKDG+KISKS GNVIDP++LV+KYGVD TR+FLMSEV
Sbjct:   45 GAEVEWVAKEPSYFFKLSEYEDKLLEYYEKNPEFIAPESRRNEVLGFVKQGLRDLSISRTTFKWGVPVPGDDDHVMYVWIDALANYISALGYPNMEKGSEFDKFWPGSLHVVGKDILRFHAIYWPAFLMAADLPVPRRLFAHGWWTKDGEKISKSLGNVIDPVELVEKYGVDQTRFFLMSEV 226

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: B8CCP4_THAPS (Methionine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCP4_THAPS)

HSP 1 Score: 319 bits (818), Expect = 3.080e-104
Identity = 143/182 (78.57%), Postives = 162/182 (89.01%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNRE--GEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+VEWV+KE SYFFKLSE+Q  LL +YE +PDFIAPESR+NE +SFV GGLKDLSISRT+F WGVPVPGDDDHVMYVWIDAL NY+SALGYPN E  G FD+FWPA LHV+GKDILRFH+VYWPA LLAAG+  PKR+F HGWWTKDG+KISKS GNVIDP++L+D YGVDPTR+FLMSEV
Sbjct:  206 GAEVEWVKKEDSYFFKLSEYQDELLNYYEAHPDFIAPESRKNEVVSFVKGGLKDLSISRTTFDWGVPVPGDDDHVMYVWIDALTNYMSALGYPNTEPGGNFDKFWPASLHVVGKDILRFHAVYWPAFLLAAGIPLPKRIFAHGWWTKDGEKISKSLGNVIDPVELIDTYGVDPTRFFLMSEV 387

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: UPI00115ED8F3 (methionine--tRNA ligase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115ED8F3)

HSP 1 Score: 311 bits (796), Expect = 1.090e-101
Identity = 136/180 (75.56%), Postives = 157/180 (87.22%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNREGEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA VEWVE EPSYFF+LS WQ+ LL+FYEKNPDFIAP SRRNE ISFV GGL DLS+SRTSF WGVPVPGDD H+MYVW+DAL NYI+A+GYP   GE+ R+WPADLH++GKDILRFH+VYWPA L+AAGLEPPKR+F HGWWT +GQKISKS GNVIDPL L+++YG+D  RYFL+ EV
Sbjct:  154 GAPVEWVE-EPSYFFRLSAWQERLLDFYEKNPDFIAPNSRRNEVISFVKGGLTDLSVSRTSFKWGVPVPGDDQHIMYVWLDALTNYITAVGYPETGGEYARYWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPKRVFAHGWWTNEGQKISKSLGNVIDPLQLIERYGLDQVRYFLLREV 332

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: W7TRH3_9STRA (Methionine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRH3_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.250e-101
Identity = 142/184 (77.17%), Postives = 160/184 (86.96%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNREGE----FDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+V WV KEPSYFFKLS WQ+PLLEFY  +P+FIAPESRRNE ISFV GGLKDLSISRT+F WGVPVP DDDHVMYVW+DAL NYISALGYP  +G     + RFWPADLHV+GKDILRFH+VYWPA L+AAGL PP+R+F HGWWTKD QKISKS GNVIDP+ LV+++G+DPTRYFLMSEV
Sbjct:  235 GAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEV 418

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A7S2LM79_9STRA (Methionine--tRNA ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LM79_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.790e-101
Identity = 140/182 (76.92%), Postives = 162/182 (89.01%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNREG--EFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+VEWV KEPSYFFKLS+++  LLEFYE+NPDFIAPESR+NE +SFV GGLKDLS+SR SF WGVPVPGDDDHVMYVWIDALANYISALGYP+ +   ++  FWPA +H++GKDILRFH+VYWPA L+AAGL  PKRLF HGWWTKDG+KISKS GNVIDP++LV+KYGVD TR+FLMSEV
Sbjct:  217 GAEVEWVTKEPSYFFKLSDYEDKLLEFYEQNPDFIAPESRKNEVLSFVKGGLKDLSVSRMSFKWGVPVPGDDDHVMYVWIDALANYISALGYPSVDAGTKYSNFWPASVHMVGKDILRFHAVYWPAFLMAAGLPLPKRLFAHGWWTKDGEKISKSLGNVIDPVELVEKYGVDQTRFFLMSEV 398

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A7S3PDL6_9STRA (Methionine--tRNA ligase (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDL6_9STRA)

HSP 1 Score: 305 bits (780), Expect = 1.800e-101
Identity = 140/182 (76.92%), Postives = 155/182 (85.16%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNR--EGEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GADVEWV KE SYFFKLSE+Q  LL+FYE NPDFIAPESRRNE +SFV GGL+DLSISRTSF WGV VP DD HVMYVWIDAL NYISALGYPN   +  + +FWP  LHV+GKDILRFH+VYWPA+L+AA L  PKRLF HGWWTKDGQKISKS GNVIDP++L +KYGVD TR+FLMSEV
Sbjct:    3 GADVEWVSKEESYFFKLSEFQDKLLQFYEDNPDFIAPESRRNEVVSFVKGGLRDLSISRTSFQWGVKVPKDDGHVMYVWIDALTNYISALGYPNEGSDSNYSKFWPGALHVVGKDILRFHAVYWPAMLMAADLPLPKRLFAHGWWTKDGQKISKSLGNVIDPVELCEKYGVDQTRFFLMSEV 184

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A512H3Z5_9PROT (Methionine--tRNA ligase n=1 Tax=Pararhodospirillum oryzae TaxID=478448 RepID=A0A512H3Z5_9PROT)

HSP 1 Score: 308 bits (789), Expect = 1.390e-100
Identity = 135/180 (75.00%), Postives = 157/180 (87.22%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNREGEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA VEWVE EPSYFF+LS WQ+PLLEFY  NPDFIAP+SRRNE I FV GGL DLSISRT+FSWG+PVP D+ H+MYVW+DAL NYI+A+GYP+ EGE+ R WPADLH++GKDILRFH+VYWPA L+AAGLEPPKR+F HGWWT +G+KISKS GNVIDPL LV+ YG+DP RYFL+ EV
Sbjct:  155 GAPVEWVE-EPSYFFRLSRWQEPLLEFYRANPDFIAPDSRRNEVIRFVEGGLTDLSISRTTFSWGIPVPDDEKHIMYVWMDALTNYITAVGYPDTEGEYARLWPADLHMVGKDILRFHTVYWPAFLMAAGLEPPKRVFAHGWWTNEGRKISKSVGNVIDPLALVETYGLDPVRYFLLREV 333

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A7S4QLY2_9STRA (Methionine--tRNA ligase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLY2_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.420e-100
Identity = 140/182 (76.92%), Postives = 158/182 (86.81%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNRE--GEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+VEWV KEPSYFFKLSE++  LLE+YE NP FIAPESRRNE + FV  GL+DLSISRT+F WGVPVPGDDDHVMYVWIDALANYISALGYPN +    FD+FWP  LHV+GKDILRFH++YWPA L+AA L  PKRLF HGWWTKDG+KISKS GNVIDP++LV+KYGVD TR+FLMSEV
Sbjct:  225 GAEVEWVAKEPSYFFKLSEYEDKLLEYYEANPGFIAPESRRNEVLGFVKQGLRDLSISRTTFKWGVPVPGDDDHVMYVWIDALANYISALGYPNMDEGSSFDKFWPGSLHVVGKDILRFHAIYWPAFLMAADLPVPKRLFAHGWWTKDGEKISKSLGNVIDPVELVEKYGVDQTRFFLMSEV 406

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BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Match: A0A2D9EY49_9PROT (Methionine--tRNA ligase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9EY49_9PROT)

HSP 1 Score: 308 bits (788), Expect = 1.810e-100
Identity = 133/180 (73.89%), Postives = 159/180 (88.33%), Query Frame = 0

Query:    1 GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSGGLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNREGEFDRFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVDKYGVDPTRYFLMSEV 180
            GA+VEWVE EPSYFFKLS W+  LL FY+ NPDFIAP+SRRNE  SFV GGL+DLSISRT+F+WGVPVPGD+DH+ YVW+DAL NYISALG+P+ +GE+ ++WPADLH++GKDILRFH+VYWPA L+AAGLEPPKR+F HGWWT +GQKISKS GNVIDP +LV+KYG+D  RYFL+ EV
Sbjct:  153 GAEVEWVE-EPSYFFKLSAWEDKLLAFYDANPDFIAPQSRRNEVTSFVKGGLQDLSISRTTFNWGVPVPGDEDHIFYVWLDALTNYISALGFPDEQGEYAKYWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPKRVFAHGWWTNEGQKISKSLGNVIDPFELVEKYGLDQVRYFLLREV 331

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig22045.5832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVJ9_9PHAE	1.010e-114	87.91	Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2H077_9STRA	6.240e-105	78.02	Methionine--tRNA ligase n=2 Tax=Helicotheca tamesi...	[more]
B8CCP4_THAPS	3.080e-104	78.57	Methionine--tRNA ligase n=1 Tax=Thalassiosira pseu...	[more]
UPI00115ED8F3	1.090e-101	75.56	methionine--tRNA ligase n=1 Tax=Telmatospirillum s...	[more]
W7TRH3_9STRA	1.250e-101	77.17	Methionine--tRNA ligase n=2 Tax=Monodopsidaceae Ta...	[more]
A0A7S2LM79_9STRA	1.790e-101	76.92	Methionine--tRNA ligase n=1 Tax=Leptocylindrus dan...	[more]
A0A7S3PDL6_9STRA	1.800e-101	76.92	Methionine--tRNA ligase (Fragment) n=1 Tax=Amphora...	[more]
A0A512H3Z5_9PROT	1.390e-100	75.00	Methionine--tRNA ligase n=1 Tax=Pararhodospirillum...	[more]
A0A7S4QLY2_9STRA	1.420e-100	76.92	Methionine--tRNA ligase n=3 Tax=Ditylum brightwell...	[more]
A0A2D9EY49_9PROT	1.810e-100	73.89	Methionine--tRNA ligase n=1 Tax=Rhodospirillaceae ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033911	Methioninyl-tRNA synthetase core domain	PRINTS	PR01041	TRNASYNTHMET	coord: 108..123 score: 62.5 coord: 76..87 score: 62.96
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 75..180 e-value: 1.4E-50 score: 173.9
IPR015413	Methionyl/Leucyl tRNA synthetase	PFAM	PF09334	tRNA-synt_1g	coord: 5..179 e-value: 1.4E-53 score: 182.0
None	No IPR available	GENE3D	2.170.220.10		coord: 3..74 e-value: 1.6E-32 score: 113.2
None	No IPR available	PANTHER	PTHR43326	FAMILY NOT NAMED	coord: 1..180
None	No IPR available	PANTHER	PTHR43326:SF5		coord: 1..180
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 7..178

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig22045	contig	H-paniculata_contig22045:202..2574 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig22045.5832.1	mRNA_H-paniculata_contig22045.5832.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig22045 202..2574 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig22045.5832.1 ID=prot_H-paniculata_contig22045.5832.1|Name=mRNA_H-paniculata_contig22045.5832.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
GADVEWVEKEPSYFFKLSEWQKPLLEFYEKNPDFIAPESRRNEAISFVSG
GLKDLSISRTSFSWGVPVPGDDDHVMYVWIDALANYISALGYPNREGEFD
RFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKI
SKSTGNVIDPLDLVDKYGVDPTRYFLMSEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR033911	MetRS_core
IPR014729	Rossmann-like_a/b/a_fold
IPR015413	Methionyl/Leucyl_tRNA_Synth