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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1254 |
| Cds size | 957 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22039.5830.1 >prot_H-paniculata_contig22039.5830.1 ID=prot_H-paniculata_contig22039.5830.1|Name=mRNA_H-paniculata_contig22039.5830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
SEPSPEADGDDTRSAPAEEAVDSPEASEPSPEADGDDTPSAPAEEAVDSP
EASEPSPEADGDDTRSTPAEEAVDSPEASDPSPEQSGVDTPSAPAEEPAG
SKAADEEDASSLAAEPVDVAEAPEPSAVVDDEAVTEEGGVGSSINGSVDP
VPDLVELVEEEEAQTVKRPSLLSRAKRSIKKSVGELSSPTSAASGGSRRL
SGGSGKLSSSLREKAKGIKNRLTGGTTTPNVSSKSKGFFSMSGKVTSEMV
SAAGKEHLEIDESSAVPVFPVAESSQGADVEGTSAHETIDILVAQVSSGL
EDESFDLDVHPPPSPDHA* back to topmRNA from alignment at H-paniculata_contig22039:35..1712+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig22039.5830.1 ID=mRNA_H-paniculata_contig22039.5830.1|Name=mRNA_H-paniculata_contig22039.5830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1678bp|location=Sequence derived from alignment at H-paniculata_contig22039:35..1712+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGAGCCGTCACCGGAGGCGGATGGCGACGACACCCGGTCGGCTCCAGC
TGAGGAAGCGGTGGACTCCCCGGAGGCGTCCGAGCCGTCACCCGAGGCGG
ACGGCGACGACACCCCGTCGGCTCCAGCTGAGGAAGCGGTGGACTCCCCC
GAGGCTTCCGAGCCGTCACCCGAGGCGGACGGCGACGACACTCGATCGAC
TCCAGCTGAGGAAGCGGTGGACTCCCCCGAGGCTTCCGATCCGTCACCAG
AGCAGAGCGGCGTCGACACCCCGTCGGCCCCTGCCGAGGAGCCGGCTGGC
TCAAAGGCGGCGGATGAGGAAGACGCGTCGTCTCTTGCTGCGGAGCCAGT
AGACGTGGCAGAGGCGCCCGAACCGTCCGCCGTGGTGGATGATGAAGCCG
TGACGGAGGAGGGAGGCGTTGGCAGCAGCATCAACGGCAGTGTTGATCCT
GTGCCGGACTTGGTGGAGTTGGTGGAGGAAGAGGAGGCTCAAACGGTGAA
ACGGCCGTCATTACTGTCGAGGTGTGTGTTGATGGCCTAAATTGCTTGCA
GGGTACTATCATTCAAGGGGTGTTTTATTATTGTAGCGACAGTTTCGGTT
TACTCCCTTAGCCCTAGCGGGTGGATGGCTTGACATGGCGAAAATGATGT
CATGTCAATGCTTTCTCGTTATGTGTACGATGATGAAATAAAACGAAAAT
GTGGAAGCTTTGAGGGGTTGACTTTACACCGATGCCAGGAAGAGGCATCT
AATTCCATGTTCCTTTTTGCTTCTCCCCTAGCAGATTTACCGGTGACGGT
TACTTTCGTTTCCCTCCCTCCCACCCGCGCTGCTTGCTTTCCTCCGTAAC
TCTGCCCCTCCCCCGTTGTCTCCCCGAAACACGATCGATGATGAAGCTGA
TGATGATGGACTGCCTTTGAAAAAAAATTGCCTGTTTGTCGTCAGGGCCA
AGCGGTCGATCAAGAAATCAGTGGGTGAACTGAGTTCCCCAACCTCTGCC
GCATCGGGCGGTTCCAGGCGTCTTTCGGGAGGTTCCGGGAAGCTTTCCTC
TTCCTTGAGAGAGAAGGCGAAGGGTATCAAAAATAGACTGACGGGTGGCA
CGACGACGCCCAACGTCTCGAGCAAAAGCAAAGGCTTCTTTTCCATGTCA
GGGAAGGTAACCAGCGAAATGGTGTCCGCCGCGGGAAAGGAACATTTGGA
GATTGATGAATCTAGCGCGGTACCCGTGTTTCCAGTCGCAGAGTCATCCC
AGGGTGCCGATGTCGAAGGTACATCCGCTCATGAAACCATAGACATCTTG
GTGGCGCAGGTGTCGAGTGGGCTTGAGGATGAGTCGTTTGATCTTGACGT
TCACCCACCGCCCAGCCCCGATCACGCGTAATTTTTCAGGTAGATGTTGA
CCGGTTGTTTCGTGTTTGTGCCCGTGGTGTGGTTCGGTAAGTGAGAAGGT
GGGTCGGCGGGAGCCTGATGTGTTTGTTTCCGAGATTGTACGTAACACGC
GTGTTTATTTGTTATATGTTCGTGGTGTTCTTCGTGTGTCGTGTGGATTC
AGACATGTTCGTTGAAAATATTGCTGGTCATGTGCTGCGCAGAGAGATGC
AACATTAAAATAGTTTTTGGGGGAGTGAGCAGAGATCAGGATTTGACTGG
ATATTTCTCTTTTCTCTGCCGGGGAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig22039:35..1712+ >mRNA_H-paniculata_contig22039.5830.1 ID=mRNA_H-paniculata_contig22039.5830.1|Name=mRNA_H-paniculata_contig22039.5830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at H-paniculata_contig22039:35..1712+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGAGCCGTCACCGGAGGCGGATGGCGACGACACCCGGTCGGCTCCAGC
TGAGGAAGCGGTGGACTCCCCGGAGGCGTCCGAGCCGTCACCCGAGGCGG
ACGGCGACGACACCCCGTCGGCTCCAGCTGAGGAAGCGGTGGACTCCCCC
GAGGCTTCCGAGCCGTCACCCGAGGCGGACGGCGACGACACTCGATCGAC
TCCAGCTGAGGAAGCGGTGGACTCCCCCGAGGCTTCCGATCCGTCACCAG
AGCAGAGCGGCGTCGACACCCCGTCGGCCCCTGCCGAGGAGCCGGCTGGC
TCAAAGGCGGCGGATGAGGAAGACGCGTCGTCTCTTGCTGCGGAGCCAGT
AGACGTGGCAGAGGCGCCCGAACCGTCCGCCGTGGTGGATGATGAAGCCG
TGACGGAGGAGGGAGGCGTTGGCAGCAGCATCAACGGCAGTGTTGATCCT
GTGCCGGACTTGGTGGAGTTGGTGGAGGAAGAGGAGGCTCAAACGGTGAA
ACGGCCGTCATTACTGTCGAGTCCGAGCCGTCACCGGAGGCGGATGGCGA
CGACACCCGGTCGGCTCCAGCTGAGGAAGCGGTGGACTCCCCGGAGGCGT
CCGAGCCGTCACCCGAGGCGGACGGCGACGACACCCCGTCGGCTCCAGCT
GAGGAAGCGGTGGACTCCCCCGAGGCTTCCGAGCCGTCACCCGAGGCGGA
CGGCGACGACACTCGATCGACTCCAGCTGAGGAAGCGGTGGACTCCCCCG
AGGCTTCCGATCCGTCACCAGAGCAGAGCGGCGTCGACACCCCGTCGGCC
CCTGCCGAGGAGCCGGCTGGCTCAAAGGCGGCGGATGAGGAAGACGCGTC
GTCTCTTGCTGCGGAGCCAGTAGACGTGGCAGAGGCGCCCGAACCGTCCG
CCGTGGTGGATGATGAAGCCGTGACGGAGGAGGGAGGCGTTGGCAGCAGC
ATCAACGGCAGTGTTGATCCTGTGCCGGACTTGGTGGAGTTGGTGGAGGA
AGAGGAGGCTCAAACGGTGAAACGGCCGTCATTACTGTCGAGGGCCAAGC
GGTCGATCAAGAAATCAGTGGGTGAACTGAGTTCCCCAACCTCTGCCGCA
TCGGGCGGTTCCAGGCGTCTTTCGGGAGGTTCCGGGAAGCTTTCCTCTTC
CTTGAGAGAGAAGGCGAAGGGTATCAAAAATAGACTGACGGGTGGCACGA
CGACGCCCAACGTCTCGAGCAAAAGCAAAGGCTTCTTTTCCATGTCAGGG
AAGGTAACCAGCGAAATGGTGTCCGCCGCGGGAAAGGAACATTTGGAGAT
TGATGAATCTAGCGCGGTACCCGTGTTTCCAGTCGCAGAGTCATCCCAGG
GTGCCGATGTCGAAGGTACATCCGCTCATGAAACCATAGACATCTTGGTG
GCGCAGGTGTCGAGTGGGCTTGAGGATGAGTCGTTTGATCTTGACGTTCA
CCCACCGCCCAGCCCCGATCACGCGTAAGGCCAAGCGGTCGATCAAGAAA
TCAGTGGGTGAACTGAGTTCCCCAACCTCTGCCGCATCGGGCGGTTCCAG
GCGTCTTTCGGGAGGTTCCGGGAAGCTTTCCTCTTCCTTGAGAGAGAAGG
CGAAGGGTATCAAAAATAGACTGACGGGTGGCACGACGACGCCCAACGTC
TCGAGCAAAAGCAAAGGCTTCTTTTCCATGTCAGGGAAGGTAACCAGCGA
AATGGTGTCCGCCGCGGGAAAGGAACATTTGGAGATTGATGAATCTAGCG
CGGTACCCGTGTTTCCAGTCGCAGAGTCATCCCAGGGTGCCGATGTCGAA
GGTACATCCGCTCATGAAACCATAGACATCTTGGTGGCGCAGGTGTCGAG
TGGGCTTGAGGATGAGTCGTTTGATCTTGACGTTCACCCACCGCCCAGCC
CCGATCACGCGTAA back to top
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