mRNA_H-paniculata_contig2203.5829.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2203.5829.1
Unique NamemRNA_H-paniculata_contig2203.5829.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A0G4IJA9_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJA9_PLABS)

HSP 1 Score: 110 bits (276), Expect = 1.240e-25
Identity = 49/137 (35.77%), Postives = 87/137 (63.50%), Query Frame = 3 
Query:  198 WCCRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFFVDGEASERNDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLM 608
            WCCR+ +G+   +  Q++ KL  ++  +P T  +C++   G+ ++   V  +    +D+   +A LKRA EQF +TL Q  CPV+H+ G   +FSCY++G+ +LAFY+ M   ++ +++T DAD R+  ++ADL+L+
Sbjct:    2 WCCRRPAGLSAQVSRQIQAKLREIETVFPRTVVSCIVTQTGELIAQQ-VKPDQERVDDLVLPIAQLKRAAEQFGSTLNQSSCPVVHLRGNRVMFSCYELGDHLLAFYTDMSGVDLMTYDTADADSRMGFIIADLRLL 137
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A835ZF51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF51_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.910e-25
Identity = 68/185 (36.76%), Postives = 103/185 (55.68%), Query Frame = 3 
Query:  195 AWCCRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGK----------------FLSGFFVDGEASER--NDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGES---------ILAFYS-HMGSENMRSFNTHDADIRLRELLADLKLMLTGAVMHSPGTSNDSPPVT 665
            +WCCR+ +GM P+L D+L  +L  +  +YPGTHY CL+D  G+                 ++G F   +  +   +  CTAV++L  A  QFA TL QM C V+HI G+  LFSCY+V +          ILAFY+  +    + + +T DAD  +++++A L+ ML G VM  P  +N SPP++
Sbjct:    3 SWCCRESTGMVPSLPDELETELRQILHYYPGTHYTCLMDAAGRRQGGSSLTIGAVLPHPLVTGSFTSDDVLDAPPDKFCTAVSSLHNAAVQFARTLDQMGCSVMHIAGDQHLFSCYEVVDKSQPGLVNPWILAFYTTSVDGVPVSAIDTRDADEGVKKIVAALESMLAG-VMTPP--ANSSPPIS 184
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A0H5QGE2_9EUKA (Uncharacterized protein (Fragment) n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QGE2_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 6.850e-23
Identity = 46/142 (32.39%), Postives = 88/142 (61.97%), Query Frame = 3 
Query:  201 CCRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFFVDGEASERNDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLMLTGAVM 626
            CCR+ +G    +  Q++ KL  +++ +P T  +C+L   G+ ++   + G     +D+   +A+LK+A EQF +TL    CP+LHI G + +FSCY+ G+++LAFYS++  +    ++T DAD R+  ++++L+L+    ++
Sbjct:   31 CCRRSNGFSLQVMKQIQGKLKEIEMVFPETTASCILSQSGELIAQQ-IKGNNPRVDDLVLPIASLKKAAEQFGSTLNAAKCPILHIRGNNVMFSCYEFGDNLLAFYSNLNGKETE-YDTTDADTRMSIIISELRLLFQNLIV 170
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: L8H113_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H113_ACACA)

HSP 1 Score: 94.7 bits (234), Expect = 1.280e-19
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 3 
Query:  204 CRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFFVDGEASERNDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGESILAFYSHMG-SENMRSFNTHDADIRLRELLADLKLMLTGAVMHSP 635
            C+K +G+ P +  +L +    L   +P T    +++ +G+ L  F  +  A  + D+C  +  LKRA  +FA T G+ +C +L + G  Q+FSCY +GE+ +AF++ +   E + S  T   ++R++ L  +LKLML  A +  P
Sbjct:    6 CKKETGLSPVVYRKLENVFKELQTLFPATPSCAIVNAQGELLYAFGEEASAGIQEDICLTLQKLKRAAVKFAETQGEHECSLLRVKGTKQIFSCYQIGENFMAFFTPLPVDEEVESVQT---ELRMQALCEELKLMLLDANIAKP 147
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A1V9Y5W5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5W5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.300e-14
Identity = 46/142 (32.39%), Postives = 76/142 (53.52%), Query Frame = 3 
Query:  201 CC--RKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFFVDGEASERN--DVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLMLT 614
            CC  R+R     +L     D++ G+   YPGT Y C+LD  G  L+    +   +  N  ++   +  L+++   FA+TL   +  V+HI GES +FSCY +   +LAFYS M S ++  F+  +AD +L  +  +L+ + T
Sbjct:    7 CCAARRRKERQKSLLKAQLDRVHGV---YPGTTYVCILDESGDVLAQVMTEPSCASMNPDELAGVITTLRQSVALFASTLNHAETQVVHIKGESHIFSCYSLDAHVLAFYSVMPSVDVALFDCSEADRKLEGICIELQRIAT 145
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A8K1C6G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6G3_PYTOL)

HSP 1 Score: 79.3 bits (194), Expect = 5.700e-14
Identity = 46/142 (32.39%), Postives = 80/142 (56.34%), Query Frame = 3 
Query:  207 RKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDL-EGKFLSGFFVDGEASERNDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLMLTGAVMH 629
            R+RS     L  +  +++ G+   YPGT YACLL+   G+ ++   +    +E  ++   +  LKRA +QFA TL Q++  V+H+ G+ ++FSC+    +ILAFY+ M   N+  F+ ++AD  +  +  +L + L G   H
Sbjct:   12 RRRSDHNERLYQEQFERIRGV---YPGTDYACLLNAASGEIIAQTEIPVVNTE--ELARTIVTLKRAAQQFATTLTQVESQVVHVKGDDRMFSCFGGEGTILAFYTQMPGVNLELFDCNEADKTVHMINTEL-MRLAGMTSH 147
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A7S0DLL6_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLL6_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.040e-11
Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 3 
Query:  201 CCRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFFVD-GEASERN--DVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDV-GESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLML 611
            CC     +   L   ++     +   +  T + C++ L+ K ++   +  G+A+  +  DV   + +LK+A E F + L    CPV+HI G +Q+FSCYD+ G +IL F S+       SFNT  AD +++ ++A L   L
Sbjct:   31 CCCPSEDVKGELHTIIQQNFRSVGKIFGNTAFICIMTLDSKIVAERQMGAGQANSSSPVDVIEQMGSLKKAAENFGSILHCSKCPVIHIKGNNQIFSCYDLWGHNILVFSSYYHRAIASSFNTAGADNQMKAIVASLSAAL 171
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A0D2X122_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X122_CAPO3)

HSP 1 Score: 65.1 bits (157), Expect = 6.800e-8
Identity = 33/109 (30.28%), Postives = 60/109 (55.05%), Query Frame = 3 
Query:  297 ACLLDLEGKFLSGFFVDGEASERNDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDVGESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLMLTGAV 623
            +C++  +G  L+    D    ++ DV + +  LK A +QF   L + +CPVLH+TG + + SCY++ E+ L     M  + + +F+T  A   +  +L D+K +L  A+
Sbjct:  259 SCVMCPDGTVLAQ--TDVSWVQQRDVLSIMHDLKFASQQFGHALDEPECPVLHLTGSTNIISCYELNENFLVVNCKMTPQQLETFDTRQAQTLVEPVLQDIKQLLERAL 365
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BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Match: A0A7S0DKX7_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DKX7_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 8.360e-6
Identity = 29/101 (28.71%), Postives = 52/101 (51.49%), Query Frame = 3 
Query:  201 CCRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFFVD-GEASERN--DVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYDV 494
            CC     +   L   ++     +   +  T + C++ L+ K ++   +  G+A+  +  DV   + +LK+A E F + L    CPV+HI G +Q+FSCYD+
Sbjct:   31 CCCPSEDVKGELHTIIQQNFRSVGKIFGNTAFICIMTLDSKIVAERQMGAGQANSSSPVDVIEQMGSLKKAAENFGSILHCSKCPVIHIKGNNQIFSCYDL 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2203.5829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A0G4IJA9_PLABS1.240e-2535.77Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A835ZF51_9STRA4.910e-2536.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0H5QGE2_9EUKA6.850e-2332.39Uncharacterized protein (Fragment) n=2 Tax=Spongos... [more]
L8H113_ACACA1.280e-1931.72Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A1V9Y5W5_9STRA1.300e-1432.39Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K1C6G3_PYTOL5.700e-1432.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0DLL6_9EUKA1.040e-1130.50Hypothetical protein n=2 Tax=Amorphochlora amoebif... [more]
A0A0D2X122_CAPO36.800e-830.28Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A7S0DKX7_9EUKA8.360e-628.71Hypothetical protein n=2 Tax=Amorphochlora amoebif... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2203contigH-paniculata_contig2203:13835..19642 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.8
Seed ortholog evalue1.7e-13
Seed eggNOG ortholog112098.XP_008610911.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CYH3@1,2S4D0@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1236
Cds size498
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2203.5829.1prot_H-paniculata_contig2203.5829.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2203 14026..19095 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929604.8000402-UTR-H-paniculata_contig2203:13834..140251622929604.8000402-UTR-H-paniculata_contig2203:13834..14025Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2203 13835..14025 +
1691480932.4833195-UTR-H-paniculata_contig2203:13834..140251691480932.4833195-UTR-H-paniculata_contig2203:13834..14025Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2203 13835..14025 +
1622929604.8802795-UTR-H-paniculata_contig2203:19095..196421622929604.8802795-UTR-H-paniculata_contig2203:19095..19642Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2203 19096..19642 +
1691480932.5480669-UTR-H-paniculata_contig2203:19095..196421691480932.5480669-UTR-H-paniculata_contig2203:19095..19642Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2203 19096..19642 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929604.8135386-CDS-H-paniculata_contig2203:14025..141621622929604.8135386-CDS-H-paniculata_contig2203:14025..14162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 14026..14162 +
1691480932.5006075-CDS-H-paniculata_contig2203:14025..141621691480932.5006075-CDS-H-paniculata_contig2203:14025..14162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 14026..14162 +
1622929604.8295631-CDS-H-paniculata_contig2203:14473..145621622929604.8295631-CDS-H-paniculata_contig2203:14473..14562Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 14474..14562 +
1691480932.5167716-CDS-H-paniculata_contig2203:14473..145621691480932.5167716-CDS-H-paniculata_contig2203:14473..14562Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 14474..14562 +
1622929604.848984-CDS-H-paniculata_contig2203:14969..150551622929604.848984-CDS-H-paniculata_contig2203:14969..15055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 14970..15055 +
1691480932.5267253-CDS-H-paniculata_contig2203:14969..150551691480932.5267253-CDS-H-paniculata_contig2203:14969..15055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 14970..15055 +
1622929604.8664026-CDS-H-paniculata_contig2203:18909..190951622929604.8664026-CDS-H-paniculata_contig2203:18909..19095Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 18910..19095 +
1691480932.5339167-CDS-H-paniculata_contig2203:18909..190951691480932.5339167-CDS-H-paniculata_contig2203:18909..19095Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2203 18910..19095 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2203.5829.1

>prot_H-paniculata_contig2203.5829.1 ID=prot_H-paniculata_contig2203.5829.1|Name=mRNA_H-paniculata_contig2203.5829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
MAWCCRKRSGMGPTLQDQLRDKLSGLDIFYPGTHYACLLDLEGKFLSGFF
VDGEASERNDVCTAVAALKRAGEQFAATLGQMDCPVLHITGESQLFSCYD
VGESILAFYSHMGSENMRSFNTHDADIRLRELLADLKLMLTGAVMHSPGT
SNDSPPVTAHDTRMV*
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mRNA from alignment at H-paniculata_contig2203:13835..19642+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2203.5829.1 ID=mRNA_H-paniculata_contig2203.5829.1|Name=mRNA_H-paniculata_contig2203.5829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5808bp|location=Sequence derived from alignment at H-paniculata_contig2203:13835..19642+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGAAGCAGGAACAACCTACAGCCAGTACTGTATAGTACAGTATAGTCC
AGTACTATACGGTACAGCTGGAGCAGCAGCCTGGTGGATCTACTGTCTCT
TGCAGGAACTTCAATTGATAGCCTCAACGGCGGCTGGGTGCAGGGATCTA
TGCGTGGGGAGGCGTGAGTAAATAGAAACTGGGCACCATAGATGGCGTGG
TGTTGTCGGAAGCGATCGGGCATGGGCCCAACCCTCCAAGATCAGCTGAG
AGACAAACTCAGCGGTTTGGACATTTTCTATCCAGGGACGCACTACGCTT
GCCTGCTGGACTTGGAAGGAAAATTTCTGTGAGTGCAATCAGAGTCATGA
ATGTTCATGATCCCATTGCTGTTATATTTTCATCAAGTCTCATGATCGCG
TGCAAATTGAACATAGACGCTCAGTATGACATTCGGGCTAATGTTCCGCT
TTGCGTTAACTCTGTGCCGTTTGCTGTCCTCGAACTTCCATGTGTTAATA
TAACAAGAGACAACAGCACACACCTGTACAGACCTCTAACTTTGGATGCT
GTTTTTTTTTCAAATTCCCTGTTGTGTTGATATCCACATATATGCTCCAT
GTCATCTCATATCATGCCACCCCATGACCCGGATTGTAGATCTGGATTCT
TCGTGGATGGGGAAGCATCAGAGCGAAATGATGTCTGCACAGCTGTTGCG
GCACTGAAGAGGGCAGGGGAACAGTTTGGTGAGGTGTTATTAGCGTACTC
TACTGTAGACATGTTCGACAGTGGTATTTGATTCACTCGGTTTGACATGT
CCGGGGGTTCAGACGGCCGTCGGTCACTGTCCATCACACCGAACAAATGC
ACCAGTAGACCCATAGATTCGATGAGGTAATATTGTGGTCTTCCGTTTGA
GCAGGAACTTGCTTTCAGCGGATAATTTTACGGTTGTGTTCTTACTGTAC
TTGTTGCCTGCGAAAGGTGGCAGAGAAGGATATGTTTAGCTTGAAAACAA
CAGTGAACATGCAGAAGATGTCCTCGTCGTGGGTGTTGCCGCACTTATTT
CACACCCAACCGCTGATATTCACCCGCGCCTGCTCGACACATGCCCGTCA
TCAATGCTCCTGTGGCATCTGCATCGTCGGTTCAGCGGCAACTCTCGGAC
AGATGGACTGCCCAGTACTCCACATAACGGGGGAGAGCCAGCTGTTTTCA
TGTTACGACGTGGGAGAGAGTGTGAGTGAGTCTGGATTGTCTAAACCTTC
ATGAATCTTTTATCATCTTGGATTCGTCCATTCCCGTTGTACTGATAGAT
ACGAAGTAGTACCCTTCCTCTACTTCGAGTCAGTATAACAGTGTAACGAC
CTACCTGCTCATGTTGTACTAAATATAAATAAATGACTGATTGTTCTCGA
GAGAAACAAATTATTTGTCCCAGATTCGTAGGGAATGGATTTTAGCTGGA
GAGCTAGCTCATGATTAGTAACACTGTAGTAGTCGAAACGCTGGTCACCG
CTGTTTACGCGTTCATCTTGCCAAAAATATATATACCCTCAGAGCAGATT
CTGTTAAGTCAAAAAGGCGTCTCATCCAGATCTGAACGGTGGTGGGCACA
AAAAGAAAACGGATATGTCTGATGCAATCAATCGACGAGATACACACAGT
GATGAGGGCACATCCAAGCACCGTTGGGTCGACCACGGAGCGAGTGAACG
GTATGCAAAGGCTGTGAATTGCAAAATGTGACGAAGGAACACAGTACGGC
AATTATGGCTGTCGTTGAGCCCCACGCTCATTTGGGAAGTCTGAACGATA
GTCTCCACTGGTCACGCTTTTGTCTTGCCAAAAATATATATTATCGGAGC
AGCTTTTTCCCAGAAGATTCTGTGAAGTCAAAAAGGCTTTCCAAACCAGA
TCTGAATGGTGCTGAGCACAAAAAAGAAAACGGTCATGTCTCATGCAATT
AACCAATGATACACACAGAGACAGTGATGAGGGCATGTCCAAGTCCCTTT
AGTCGGCCAAGGTGCGAATGGCACCCAAATTCCGTGAATTGCAACCTGTG
ATGAAGGAACACAGTATATTAATTGATTATAGTCATTATCCTGGATATTA
CACAACGTAGTACGGGCCATAGGTCTTGATCACCTGAGCGCCATGGACTT
CGTTCGGGTACAATCAGTTAGAAAATTATCGAGAATAGGTGTGTTTCATG
GGCCAGCTGACCAAAGCAGACATCGACACAGGCAAACTTTTTGATTATGC
AAATTGACGTAAATTACTGTAGCATCCTCAACACAAAATAGATTTCTGTC
AAACGACTCCCTGTGCATGTTGCTAGCGTGTTGGTTTAAGACTCTATCGG
TAGTGTTTCTCGATCTTTTCGTTCCTGAAACATGCTATATACCCTTTTGG
CCCCAACCATTTCGCAACAACAATCGGGACAAACCTCGACATTTCGGGTA
CCCAAGTCCGATTTCTCGATAAGACCTCGATAGGACCTGCCTTTGAGTAT
GTACCAACCCCCAATTACAAGAAATAGTCAAATCTAACAAAAAATCGAGC
CTCGAAATATTTGGTAATCATGAGATACTCACATTGGAAGTCGTGCTCAA
CTGGTGGCCGGCCTATATACTATTAATAATATTCAAGATGAAAACACTCG
TACTTCCGGTGAGGCGTGATACTTGCTTTGTATGGTGCGGACCGTCCTGC
ACTCTGTATTTGCAAAATCGGAGTGTCGTTTGACAATGCTGATTGAGGAA
TTGTGCTCCCAGAATTACATACAGTGTGCCGAACCACGGTTTTCAAAGGG
GGGGGGGAGGGTTATTTGTTCCTAATTTGCGATTCAATGAGTACTAACAG
GCTGACGCGAGAAGATAAGAGCATTGACACACAGCTATAGGTCGTGGCCA
AATAAGGGGGAATAGTTGATACCAAACGGTGAATAATAGAGCAAGAACCC
CAATTTGGGGGCGAGCACCTACAGCCATGTCGGTCTTAGCAGCAACACGA
AGATACACAGTCATGCGGCGCCACAGTGCTCCCTCTCTGCATGGAAATAG
CAGATGAAATGACGGGAAGGTAATTGGTGTCTGTTGATGCTAGGATACGT
GCGTAATTGTTTTGCCCCAATTGGGATTGCTGCCGAACTGTTTGCAACGA
AAGCGTTCGAGTCTTCGTGCCTGAGGCAATTCCATATGTATTAGTTCCCA
CCGTAGCTCGCTCACCACGTGGATTGACTGTACCCTCTGTATCTCGGCGT
CATCTTTTTCTGTTCTAAAAAAACAGTAATGGCGCCTAATTAAGACCATG
GCAGAATAAGAGTAACGTATTGAAAGCGATATTTATAATCGGTTGAGCAT
TTAATGGAAGAGAGGTGTTTGTTGGAATACTCGACAGACACGTAGGACAG
ACATATCATTTTTTTTACAATTTGAGTTTTCAGCGGTTTGTACACGTCGC
TCATAACAGGTATTTGTCGTTGCAGGAATCCGCCACGAACGCGGTACAGC
TTTATTATTCCGGGTAGATTGAACAGAGCAGCCACAATGCTTTTCCTTGT
CGAGTACACCGACGCAACACAACCGTGTTCTAGAGCTGTACACTAACGAC
GGTATATTTGATAGATATGTCCTGTTCTACCGTACGTGCGGAATATTCGA
CTAAAACCCTGTAAATCACGTTGAAGATCTGCGTTTTACGCTACGTAAAT
CAGTGGTTCAGTTCTGTTAGACAACGTGTGCAAAGCTTTGCGGCTCCAGT
GTTTGTGGGGGGAGAGTAAGGAGCACGCAACGGAGTAGGGCAACTCCATT
TGTACCTACAGTCCAAAAATACAAACCGGGTGTATCGGGTTACCCATAAA
TTTCAACTCTAGTTAATTCATTGCCAATTTCCATGCAATCGGCTTTGCAG
CATACCTGAACACTGTATCGTACCTAGCTATCATAAGAAGGAGGCATTCC
ATGGCTTACAAAATACCGCACGTGCGGTATAAGAGATCGACCCTGGACAA
GTAAAGACTCTGGAACCACATCCCGTCAGTCAGCATAGTCCAAGGCACAT
TTTGACAAGTATGAGCTTGTCACGAGATGATATGGAAAAAAACCGAAAGC
GTTGACAAAATATATATATATTACAGAAAGCCCAACGCCGAACTACCAAT
TGCGTCACCAGTCATGTTGTCATGTTCCGGTTGTCACGACTTGTAGCAGG
CCATCCGCTGCTGAGTGTGTGGGTTTGATCGCGCATAGGAGGACGCCACA
CACACAACAGCTATCGGTCGCCACGGAACTCTCAGGGGTCTTGACCTTAG
TTGGCGAAAGCACTTGATCCAAAACACATGTGTCCTTCCTCTCCGCATCG
TTTTCGCAATGAGGCACGGAAACTGCTCCGCTTGAACAGTACGAACTCCC
GCTTTTCAGACCCGCAGTGTTTTATGGGAGAAAATATAAGGCTAGCGGAC
TAGGATAATATGAGAACAAAAACTGGCCATTAAAAGCAGTGAACGTAAAC
GGCACTACCGTCGAATTTTCCCCACGTACTTCCCTACCCCATAAATGCAA
TTTTTGCTCAATTCCACCCTTTTGGCATGTTTTCCCGTTGTATCAATTCA
TGACAATCTCAACACAGTAAATCGACCGCAGCAAATGCCGGCAGTGAATG
AGTGTAAACAAATCCTGCTTGTTCGATTTTGTGTTGTCGACAGTTTTTCG
CGTAAAAGGCCACGAGGTCACGGACCTAGGCCCGAACGGGTACGATAGCT
TGTGAACTGAGCATGACTGGAAGTCTAGTCAGAGGTCTTTTAGTGGGTAC
TACCACCCCCCACACTGCCTACCTGGTTCGGCCGAACCGGGGTGGCGCCT
ACCCCGCAGAGGAATAAATAATTATGTTCTGTAAAAGGAAATGTAGATAT
ACTTTGGTAAGGGAGCATGGGATAGAGGATTTTGCCTTAGCCTTCCGGGG
GTAAAAAAAAAAAGGCCACGAGATGCAGCAGTCGTGCTAGATAATGTTGC
CAACCACTTTGCACGCTGAATCTATTCACCGACTGAAGGAACGATCCTTG
CCCTCTGTTTGTTTTTATTGCGCAGATCCTGGCGTTTTATTCACATATGG
GGAGCGAGAATATGCGATCATTCAATACACACGACGCCGACATCCGGTTA
CGAGAGCTTTTAGCAGATCTTAAGCTGATGCTGACGGGGGCTGTGATGCA
CTCTCCAGGGACATCGAATGATTCCCCTCCAGTCACAGCGCACGACACGC
GCATGGTGTAGTGGATGGTGTAAATGCTCTCTCGCCGATGGAAGAGTTGG
TGTCATTTGTCACGTGATATTTGTTGTGAGATGTACGGGTTGGAAGTATT
CCACCGAGTGTTGCTTGCTCCTGAATTAATTATATTTTTACGAATAAGGC
CATGTGACGGAATATTGAGTCCACTAACAATAATTAGATAACCAAGTCGA
GCTCAAGTTCCAGCTATGCCTACCCCCCAGAGGAATAAATAACTCTGTTC
TGTTGAAGGAAATGTAGAAATACTTCGGTATGGAAGCATCGGTAAAGGTT
TTTGCCTTAGCCTTCCGGGGGTTCAACAAAAAAGAGAAAAGTTTAGCTAT
TAAATATTAAATGCTGCATTTCGCTGCGCCAGAGCGGTATTTGAATACAC
GAAAACAACAATTTACAGTAACTGCTAGCTGGAATAAATCTAGACCTACA
ATACGGCATTGTGAGTACATTTTCACCTCCATCAAACTAAGGCACACAGA
ATACAAAGTAAAGGCCAAGTCGAGCAATATCATAACACACAGTACACATG
CTCCCATC
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Coding sequence (CDS) from alignment at H-paniculata_contig2203:13835..19642+

>mRNA_H-paniculata_contig2203.5829.1 ID=mRNA_H-paniculata_contig2203.5829.1|Name=mRNA_H-paniculata_contig2203.5829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at H-paniculata_contig2203:13835..19642+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTGGTGTTGTCGGAAGCGATCGGGCATGGGCCCAACCCTCCAAGA
TCAGCTGAGAGACAAACTCAGCGGTTTGGACATTTTCTATCCAGGGACGC
ACTACGCTTGCCTGCTGGACTTGGAAGGAAAATTTCTATGGCGTGGTGTT
GTCGGAAGCGATCGGGCATGGGCCCAACCCTCCAAGATCAGCTGAGAGAC
AAACTCAGCGGTTTGGACATTTTCTATCCAGGGACGCACTACGCTTGCCT
GCTGGACTTGGAAGGAAAATTTCTATCTGGATTCTTCGTGGATGGGGAAG
CATCAGAGCGAAATGATGTCTGCACAGCTGTTGCGGCACTGAAGAGGGCA
GGGGAACAGTTTGATCTGGATTCTTCGTGGATGGGGAAGCATCAGAGCGA
AATGATGTCTGCACAGCTGTTGCGGCACTGAAGAGGGCAGGGGAACAGTT
TGCGGCAACTCTCGGACAGATGGACTGCCCAGTACTCCACATAACGGGGG
AGAGCCAGCTGTTTTCATGTTACGACGTGGGAGAGAGTCGGCAACTCTCG
GACAGATGGACTGCCCAGTACTCCACATAACGGGGGAGAGCCAGCTGTTT
TCATGTTACGACGTGGGAGAGAGTATCCTGGCGTTTTATTCACATATGGG
GAGCGAGAATATGCGATCATTCAATACACACGACGCCGACATCCGGTTAC
GAGAGCTTTTAGCAGATCTTAAGCTGATGCTGACGGGGGCTGTGATGCAC
TCTCCAGGGACATCGAATGATTCCCCTCCAGTCACAGCGCACGACACGCG
CATGGTGTAGATCCTGGCGTTTTATTCACATATGGGGAGCGAGAATATGC
GATCATTCAATACACACGACGCCGACATCCGGTTACGAGAGCTTTTAGCA
GATCTTAAGCTGATGCTGACGGGGGCTGTGATGCACTCTCCAGGGACATC
GAATGATTCCCCTCCAGTCACAGCGCACGACACGCGCATGGTGTAG
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