prot_H-paniculata_contig22010.5824.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22010.5824.1
Unique Nameprot_H-paniculata_contig22010.5824.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length215
Homology
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A6H5KU45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU45_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.950e-14
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 0
Query:   82 DIMDMHRLLAHASEQITRDTTETTGVVLMGEWGI-CEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADY-ITPKGLKTGAIRTDNGGEF 215
            DI D      HA E++ RDT +  GV L G   + C  CS +K     V   T  RA++   R+++DLGG M+I S+G + + + IV D++R+    F+K+K+DA    + ++ADY       +    RTD GGEF
Sbjct: 1252 DINDCRNSHLHAHEKLLRDTAKQQGVQLTGGPLLPCLSCSISKGQVKPVGTSTSTRAVKKLVRIFLDLGGKMKIASIGGSLFTLKIVCDHTRWTRVFFLKRKSDAAEKFKHFLADYRAAGVPCEVYVARTDGGGEF 1387          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A699K4L6_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699K4L6_TANCI)

HSP 1 Score: 80.9 bits (198), Expect = 4.180e-14
Identity = 61/218 (27.98%), Postives = 103/218 (47.25%), Query Frame = 0
Query:    3 LNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + RV +V  LG N+ S  +  D SD  + +  N  F+   E   L+  V + + LY +   + A+ +   L AR S+T+  +  H+ L+H +     D      V  + ++      +C  C   K+ R +   K    + +    L++DL GPMRI S+    Y+++IVDDYSR+    F++ K++A   +  ++             IRTDNG EF
Sbjct:  313 ITRVYFVEGLGHNLFSVRQFYD-SDLEVAFRRNAYFVKNLEGVDLLKGVRS-TNLYTINLYKMASASPICLMARASSTKSWL-WHQRLSHLNFDTINDLARNYLVAGLPKFKYHKEHLCPSCEQGKSKRVSHPPKPVPNSKQRLHLLHMDLCGPMRIASINGKRYILVIVDDYSRYTWVHFLRSKDEAPEVIIKFLKRITVLLQSPVIIIRTDNGTEF 527          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A699ISM6_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699ISM6_TANCI)

HSP 1 Score: 80.5 bits (197), Expect = 6.120e-14
Identity = 63/220 (28.64%), Postives = 104/220 (47.27%), Query Frame = 0
Query:    1 LKLNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + + RV +V  LG N+    +  D SD  + +  N  F+   E   L+    + + LY +     A+ +   L AR S+T+  +  H+ L+H + +   D  +   V  + ++      +C  C   K+ R +   K    + +    L+IDL GPMRI S+    YV++IVDDYSR+    F++ K+DA A +  ++             IRTDNG EF
Sbjct:  409 IMITRVYFVEGLGHNLFFIGQFCD-SDLEVAFRRNACFVRNLEGVDLLKGDRS-TNLYTINLHEMASASPICLMARASSTKSWL-WHQRLSHLNFETINDPAKNDLVAGLPKFKYHKEHLCPSCEQRKSKRASHPPKPVPNSRQRVHLLHIDLCGPMRIASINGKRYVLVIVDDYSRYTWVHFLRSKDDAPAVIIKFLKRITVLLQSPIIIIRTDNGTEF 625          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A2U1QG52_ARTAN (Ribonuclease H-like domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QG52_ARTAN)

HSP 1 Score: 80.1 bits (196), Expect = 9.050e-14
Identity = 60/219 (27.40%), Postives = 105/219 (47.95%), Query Frame = 0
Query:    3 LNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFL-GLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + RV YV  LG N+ S  +  D +D  + +  NK F+  L  ++ L  N S  + LY ++  + A+ +   L  R + T+  +  HR L+H +        +   V  + ++      +C  C   K+ R     KT   +      L++DL GPMR+ S+    Y+++IVDDYSR+   +F++ K++A   + +++             +RTDNG EF
Sbjct: 1340 ITRVYYVQGLGHNLFSVGQFCD-ADLEVAFRRNKVFVRNLVGDDLLTGNRS--TNLYAIDINKMASSSPICLMTRATDTKSWL-WHRRLSHLNFDTINKLAKDNIVTGLPKFKYTKDHLCPSCEQGKSKRATYKPKTVPSSEARLHLLHMDLCGPMRVESINGKKYILVIVDDYSRYTWVKFLRSKDEAPGCIITFLKRIQVLLQALVRIVRTDNGTEF 1554          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A699HGF5_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HGF5_TANCI)

HSP 1 Score: 78.6 bits (192), Expect = 2.930e-13
Identity = 61/220 (27.73%), Postives = 103/220 (46.82%), Query Frame = 0
Query:    1 LKLNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEW-----GICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + +  V YV  LG N+ S  +     D  + +     ++   EE+ L+      S LY +     AA +   L ++ S+T+  +  HR L+H +     D T+   V  + ++      +C  C   K+ + + L K    +    E L++DL GPMR+ S+    Y+++IVDDYSRF    F+  K++    ++ +I+        K   IRTDNG EF
Sbjct:  225 ITIYHVYYVEGLGHNLFSVGQFC-YGDLEVAFRSKTCYVQNLEEDDLLKGDHE-SNLYTIAIPDMAASSPICLMSKASSTKSWL-WHRRLSHLNFGTINDLTKHDLVDGLPKFIYEKDHLCSACEQEKSKKASRLPKLVPSSFSKLELLHMDLYGPMRVASINEKKYILVIVDDYSRFTWVYFLHSKDETPEIIKKFISQVHLNFDAKIHKIRTDNGTEF 441          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A8J5GTW8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GTW8_ZINOF)

HSP 1 Score: 77.8 bits (190), Expect = 5.340e-13
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 0
Query:  114 GICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            G+CEGC   K+HR      T  R M   ER++ DL GP + TS    +Y+++ VDDYSRF    F+K K++  +    +        G K   +RTDNGGEF
Sbjct:  700 GVCEGCQFGKSHRLPFQNSTS-RCMTPLERIHSDLMGPTKTTSYSEGNYMLLFVDDYSRFTWVYFVKHKSETFSIFLDFKKIVEGELGRKIKTLRTDNGGEF 800          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A6L2LJ04_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LJ04_TANCI)

HSP 1 Score: 77.8 bits (190), Expect = 5.440e-13
Identity = 60/216 (27.78%), Postives = 103/216 (47.69%), Query Frame = 0
Query:    5 RVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            +V +V  LG N+ S  +  DT D  + +  N  F+   E   L+   +  + LY +     A+ +   L AR S+T+  +  H+ L+H +     D  +   V  + ++      +C  C   K  R +   K    +M+    L++DL GPMRI+S+    YV++IVDDYSR+    F++ K+ A   +++++             IRTDNG +F
Sbjct:  816 QVYFVEGLGHNLFSVAQFCDT-DLEVAFGRNPCFIRNLEGVDLLSG-NHTTNLYTINLHEMASASPIYLMARASSTKSWL-WHQRLSHLNFDTINDLAKNDIVTGLPKFKYHKEHLCPSCEQGKGKRASHPPKPVPNSMQRLHLLHMDLYGPMRISSINGKRYVLVIVDDYSRYTWVHFLRSKDKAPEVIKTFLKRITVLLQSPVIIIRTDNGTKF 1028          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A699JDG4_TANCI (Retrotransposon protein, putative, Ty1-copia subclass (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699JDG4_TANCI)

HSP 1 Score: 77.0 bits (188), Expect = 8.440e-13
Identity = 61/218 (27.98%), Postives = 101/218 (46.33%), Query Frame = 0
Query:    3 LNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + RV +V  LG N+ S  +  D SD  + +  N  F+   E   L+ N    + LY +     A+ +   L AR S+T+  +  H+ L+H +     D      VV + ++      +C  C   K+ R +   K    + +    L++DL GP+RI S+    YV++IVDDYSR+    F++ K++A   +  ++             IR DNG EF
Sbjct:   42 ITRVYFVEGLGHNLFSVGQFCD-SDLEVAFRRNACFVRNLEGVDLL-NGDRSTNLYTINLHEMASASPICLMARASSTKSWL-WHQRLSHLNFDTINDLARNDLVVGLPKFKYHKEHLCPSCEQGKSKRASHPPKPVLNSKQRLHLLHMDLCGPIRIASINEKQYVLVIVDDYSRYTWVHFLRSKDEAPEVIIKFLKRITVLLQSLVIIIRIDNGTEF 256          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A6L2JYF4_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JYF4_TANCI)

HSP 1 Score: 77.0 bits (188), Expect = 9.150e-13
Identity = 61/218 (27.98%), Postives = 104/218 (47.71%), Query Frame = 0
Query:    3 LNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + RV +V  LG N+ S  +  D SD  + +  N  F+   E   L+   +  + LY +     A+ +   L AR S+T   +  H+ L+H +     D  +   V  + ++      +C  C   K+ R +   K    + +    L++DL GPMRI S+    YV++IVDDYSR+   +F++ K++A   +++++             IRTDNG EF
Sbjct:  470 ITRVYFVEGLGHNLFSIGQFCD-SDLEVAFRRNTCFVRNLEGVDLLSG-NRTTNLYTINLHDMASASPICLMARASSTMSWL-WHQRLSHLNFDTINDLAKHDLVSGLPKFKYHKEHLCPSCEQEKSKRASYPPKPVPNSRQRLHLLHMDLCGPMRIASVNGKRYVLVIVDDYSRYTWVQFLRSKDEAPEVIKTFLKTISILLQSPVIIIRTDNGTEF 684          
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Match: A0A6L2P1J0_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2P1J0_TANCI)

HSP 1 Score: 76.6 bits (187), Expect = 1.280e-12
Identity = 60/218 (27.52%), Postives = 103/218 (47.25%), Query Frame = 0
Query:    3 LNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFNVSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRDTTETTGVVLMGEWG-----ICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGGPMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPKGLKTGAIRTDNGGEF 215
            + RV +V  LG N+ S  +  D SD  + +  N  F+   E   L+      + LY +     A+ +   L AR S+T+  +  H+ L+H +     D  +   +  + +       +C  C   K+ R +   K    +M+    L++D  GPMRI S+    YV++IVDDYSR+   +F++ K++A   +++++             IRTDNG EF
Sbjct:  339 ITRVYFVEGLGHNLFSIGQFCD-SDLEVAFRRNACFVRKLEGVDLLSGNRTIN-LYTINLYDMASASLICLMARASSTKSWL-WHQRLSHLNFDTINDLAKHDLISCLPKSKYHKEHLCSLCEQGKSKRASHPPKPVPNSMQRLHLLHMDFCGPMRIASINEKRYVLVIVDDYSRYTWVQFLRSKDEAPEVIKTFLKRISILFQSPVIIIRTDNGTEF 553          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22010.5824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU45_9PHAE1.950e-1436.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A699K4L6_TANCI4.180e-1427.98Integrase catalytic domain-containing protein n=1 ... [more]
A0A699ISM6_TANCI6.120e-1428.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A2U1QG52_ARTAN9.050e-1427.40Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A699HGF5_TANCI2.930e-1327.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5GTW8_ZINOF5.340e-1339.22Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A6L2LJ04_TANCI5.440e-1327.78Integrase catalytic domain-containing protein n=1 ... [more]
A0A699JDG4_TANCI8.440e-1327.98Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A6L2JYF4_TANCI9.150e-1327.98Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2P1J0_TANCI1.280e-1227.52Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 131..215
e-value: 4.2E-8
score: 34.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 136..215
score: 10.847
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 137..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22010contigH-paniculata_contig22010:94..738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22010.5824.1mRNA_H-paniculata_contig22010.5824.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22010 94..738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22010.5824.1 ID=prot_H-paniculata_contig22010.5824.1|Name=mRNA_H-paniculata_contig22010.5824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
LKLNRVSYVLELGRNIISTHRATDTSDKSLVYSVNKAFLGLGEEESLIFN
VSAFSGLYEVETVRSAAGTARALTARKSATRDIMDMHRLLAHASEQITRD
TTETTGVVLMGEWGICEGCSTAKAHRFAVLKKTDKRAMRAEERLYIDLGG
PMRITSLGSNSYVMIIVDDYSRFQAAEFIKKKNDATAALQSYIADYITPK
GLKTGAIRTDNGGEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf