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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 445 |
| Cds size | 432 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2201.5822.1 >prot_H-paniculata_contig2201.5822.1 ID=prot_H-paniculata_contig2201.5822.1|Name=mRNA_H-paniculata_contig2201.5822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp
MDMGNSDATSLVMGVSNSAECRSAGSPVAVFPPSAASSRPAVSHGCSSTE
RSEKPTTLNWKPAEGGKVQERKIIRAKRPGGAERGRAGEMELRRTIASRV
AGRLHGRPQAQPQEEPTKEAKDDNAEGQGAPAQAAARPRIRFR* back to topmRNA from alignment at H-paniculata_contig2201:3623..6960- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2201.5822.1 ID=mRNA_H-paniculata_contig2201.5822.1|Name=mRNA_H-paniculata_contig2201.5822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3338bp|location=Sequence derived from alignment at H-paniculata_contig2201:3623..6960- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCGGCTCTGGTATGGACATGGGAAACAGTGATGCAACAAGCTTGGTCA
TGGGTGTGAGCAACAGTGCTGAGTGTAGGTCTGCTGGTTCTCCGGTCGCC
GTGTTTCCTCCTTCGGCTGCATCTTCACGACCAGCCGTCTCGCATGGCTG
CAGTTCCACGGAAAGGAGTGAAAAGCCGACGACTCTGAATTGGAAGCCGG
CCGAGGGTGGAAAGGTTCAAGAGCGTAAGATCATCAGGGCGAAGCGACCC
GGAGGAGCTGAGCGTGGTCGCGCGGGGGAGGTGAGACAGCACGGTCACAC
TATCGTAGGGGCACTGCCGAGAAAGAGCAAGCTCTCGTGGCCGCTGACGC
GGCGGTACTTGACGAGAGAAGTAGTGCTGTGCATCAGGCATGCGATGAAA
GATCAAAATGATAGATATTTCGATGTAGTCCCTGATTTGTCGCGCAACAA
GGGCAACTGCGTCACACGTTCCTCTGATGCTATCCGGAACATGAAGAAGT
CGCTAGCTAGCTAGCTATCTAGCTGTGGTCTGTTGTGATGATTGGATCTC
TCTGGCTTGCTGGATGTAGAGAGGCAGCGAGAGACGTGGCAGAAGTGACT
TGAATGAGAAAAGTGCATGATAAAGCTTTTGATGAAAGAGAAGTTGAGCA
TTTGTCAAGACATGAGTGTAGTCGTTACCCGCAAACCAGTCTGCAGTGAA
AAATTCGTAGAAATATATAAACCAAGGGCACTAGCACGTAAATCTCGCGG
TAGCACTGGTACTACCAGAGAAATCTTGGAGATGAAGCCATAGCACATAT
CGTTTCCGCCTCCAACGGCATCTCCCGCGAGGTCCCTTTACCACGCGAGC
GGGATCGTAGGGCTCACAGTAGAGCACTCGCCGACTGGTGATTGGTACTC
GCTTGGTGCTTCGCACCACCTAGCCAGTACATCAATATACTGGCAGACAG
TCACGAGAATTGAACCCCAGATACACGTTCCGTTGGAGGAGTGTAGAAAG
ATGTGTTCTTGCCGGTTTTCGGGGGTCTCTAACTAGGGATTCGCTATCGA
GATGACTAGTAGGTGGCAAACCCTCTTTCCATCCGGGACTTGCTGAATCG
GTCCTCTAAAAGGGTTGGGACGAAATTCCACGGTGAGGCATGTAGTTTTG
GTGCATTTGGACGGCTCCGAAACCACGTAATTTTGTATAGGAAACAAACA
AGAGTACGGGTGATGGATGAGCCAATATCAAAACCGTTTCTCCATCTTGT
TTGGTTTTTATGTCCCGTGGCTACCGGATTTAGAGCATATGACAGGTATC
GCTGGAAAATTGACATTAGAAGCTTCGCGGATATGGCCTTACATTTTCCA
TTTTTTCTGTTGCGCCCTTGTTACGCGAGATACTGCACCGCTGGAGCCTA
AACTCCGGGGTCTCCGTATCACCTAGTTAGGGAAGATGTACCCCGAAATC
AGCGTTTATTATCCCCTGGCATGCTCAATTTATCTGACAATATACAGAGC
TGCTGAAATGAATCGAGAAAAAACAGCCCGCAAACAACACTATAGAAGAT
TTTTGCTACACTCCGTTTCTTTAGGTCGAGGTAACCGGTTTCGGGATGAT
GCTGAAAGGGCGTGCATGGAATGTTTCCAGTTCGTACAGAGATGCCTGAG
CAGACGAACGCGAACAAATGCAAATGTGGCACACCTTTCACTGGATTTGT
AGCTGATGTTTCGGCACGACCCACTGCAGCTATTACGCCTAGCGGGGCCA
TATGATGTTTGTGTTATGTAGTTTTATGTTTTGTCGTTGGCGAAGTATAC
ATGCTGACTGCCAATCGATAAAACACAGCCTACAGCAGAGCACACACGAA
CCAGATCACGTCCCTTCTGTAGCGAAGCAAAGGGCTAGCATGGATATGTT
TGCATTCTTTGGAGATCGCACAAACGACCGAGAATCTGGTCACATTCGGA
ACTCGTAGCAGCGCTGGTGATTTTGCATCAGAATTGGCGAAAACGCATGA
CGCACTTGTGGCAAGCATGCAATGACGTGTATTCTGAACGACCTGTGGAA
CCGCGATCGTACATGTGTATTTGCGCGGCCAAAAAGAAAAAGGCTATACG
GAAGCAAGTGACACTTGAGGTCGGTGCACACGTGGCCTAGATAATGGCAT
AGTGTCGTTAACAGCGAACACGTGGATACGGCGAGACGCTTTGACCGTGA
GTGAGTGATTGGTGAGATGATCTCCGTGCTATGAGTCCATTTCGTAAGTG
ATGCCGTCATGCTTGTTGAACAGACTCATTTTTTGCCTAAACCGCTTAAG
CTGCGCACCCTCGTGTATTGTGAACTCTACACAAGATGGAGCTGAGGAGA
ACAATAGCCTCAAGAGTGGCTGGGCGTCTCCATGGGCGTCCACAAGCTCA
GCCGCAGGAGGAGCCGACGAAGGTGCGACCCAGGCGTTGGCTTGCCCATC
TAGAGTGGTGTTTTTGTTTCGCTACCGCGGCCTCCCAGGTATTGACGTAG
TGATGGATGGGCGTTATTTCACGGTATATTCCTCCGTGTACAGCGTCTCA
ACCCAGCCCGTCCCACACCTCGAACACCGCGCGACGCACCGTCGCTGCTT
GGCCACCAAATGAACGATGTTGCGGCACATGGTGTTCGCTGTGAATAGGG
AAGTAAGAACTAAGACGAGTAAGAGGACGCGGTAAGATATAGGTTATTTT
GTTGTTGGGGTTGGTGATGAAGCTGTTGGTGGCCCATATATTGCACTAAG
ATGTTTGGTGTCATGGCGAGGGATGATCGCTGGACGAAAGCGAGGCACGC
GAGTCTCATTTGGCACTCCACCCTATGCACAGGACATTTCCGTTTCGCTT
GTTTGTCAAGTGTTGCTGCAATTGATGATACATGTTTGGTCCCCCCTGGC
GTACTCACACTATTACTAGACATGCATGTGTGAGACCTCGCGGCAAGGCT
CGTCGTCTCCCACGCAAAGACAGTTGGGTCGTGATGAGTCACCAAGGCAA
TCCGAGCGTGTTTGATGGCTCTCTCGGTGAGGTCTAACTGAATCTGGTTG
ATTTCTCCTTGACCGAATGTCCAAAAGAATACGCCGGCGTTTCCGCTTAT
CTGCGGCCTGAGAAGGTTCGGAGATGTCGAGGAGTATACGTTAAATCGTA
GATAGGAAACACCGGCTACGAGTATCATACGAGACAAAATTATATTCAAG
TGCATCTCACCCACTCGGTACACAAACATAGCCGTTGGCCATCGCCCGCT
CTGTGAGCAGGAGGCTAAGGACGACAATGCGGAGGGTCAGGGAGCGCCGG
CTCAAGCCGCAGCACGGCCGCGAATCCGGTTCCGGTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2201:3623..6960- >mRNA_H-paniculata_contig2201.5822.1 ID=mRNA_H-paniculata_contig2201.5822.1|Name=mRNA_H-paniculata_contig2201.5822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig2201:3623..6960- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACATGGGAAACAGTGATGCAACAAGCTTGGTCATGGGTGTGAGCAA
CAGTGCTGAGTGTAGGTCTGCTGGTTCTCCGGTCGCCGTGTTTCCTCCTT
CGGCTGCATCTTCACGACCAGCCGTCTCGCATGGCTGCAGTTCCACGGAA
AGGAGTGAAAAGCCGACGACTCTGAATTGGAAGCCGGCCGAGGGTGGAAA
GGTTCAAGAGCGTAAGATCATCAGGGCGAAGCGACCCGGAGGAGCTGAGC
GTGGTCGCGCGGGGGAGATGGACATGGGAAACAGTGATGCAACAAGCTTG
GTCATGGGTGTGAGCAACAGTGCTGAGTGTAGGTCTGCTGGTTCTCCGGT
CGCCGTGTTTCCTCCTTCGGCTGCATCTTCACGACCAGCCGTCTCGCATG
GCTGCAGTTCCACGGAAAGGAGTGAAAAGCCGACGACTCTGAATTGGAAG
CCGGCCGAGGGTGGAAAGGTTCAAGAGCGTAAGATCATCAGGGCGAAGCG
ACCCGGAGGAGCTGAGCGTGGTCGCGCGGGGGAGATGGAGCTGAGGAGAA
CAATAGCCTCAAGAGTGGCTGGGCGTCTCCATGGGCGTCCACAAGCTCAG
CCGCAGGAGGAGCCGACGAAGATGGAGCTGAGGAGAACAATAGCCTCAAG
AGTGGCTGGGCGTCTCCATGGGCGTCCACAAGCTCAGCCGCAGGAGGAGC
CGACGAAGGAGGCTAAGGACGACAATGCGGAGGGTCAGGGAGCGCCGGCT
CAAGCCGCAGCACGGCCGCGAATCCGGTTCCGGTAAGAGGCTAAGGACGA
CAATGCGGAGGGTCAGGGAGCGCCGGCTCAAGCCGCAGCACGGCCGCGAA
TCCGGTTCCGGTAA back to top
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