prot_H-paniculata_contig22003.5821.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22003.5821.1
Unique Nameprot_H-paniculata_contig22003.5821.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: D7G571_ECTSI (O-phosphoseryl-tRNA(Sec) selenium transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G571_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 5.400e-32
Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 0
Query:    1 QGDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            QGD+V  DV GV+ AVE S GA+ VLCVVTTTSCFAPRLPDKVDEVARIC++ GVGHVINNAYGVQCS+TCRL+NR
Sbjct:  194 QGDAVATDVDGVRAAVE-SCGAENVLCVVTTTSCFAPRLPDKVDEVARICAASGVGHVINNAYGVQCSKTCRLVNR 268          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A7R9VU14_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VU14_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.690e-22
Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    3 DSVLADV-AGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            D V+ D+ A VK   EN G    VL +VTTTSCFAPR+PD VDEVAR+C + GV HVINNAYG+QC RT +LINR
Sbjct:    7 DEVVTDMDALVKALKENEG---TVLAIVTTTSCFAPRVPDAVDEVARLCENEGVAHVINNAYGLQCDRTSKLINR 78          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A7S1ZJX1_TRICV (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJX1_TRICV)

HSP 1 Score: 95.9 bits (237), Expect = 1.050e-21
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    3 DSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            D V+ D+  V+ A+   GG  +VL VVTT SCFAPR PD VDEVARIC+  GV H+IN+AYG+QC RTC+LINR
Sbjct:   92 DEVVTDLDAVESALRTHGG--RVLAVVTTASCFAPRAPDSVDEVARICAREGVAHLINDAYGLQCGRTCKLINR 163          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A448Z7C0_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7C0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.950e-21
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 QGDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            +GD V+ D+  ++ A+   G  ++VL V+TTTSCFAPR+PD VD+VA++C + GV HVINNAYG+QC+RT +LINR
Sbjct:  225 EGDEVVTDMDAMEAALSEYG--ERVLAVITTTSCFAPRVPDAVDKVAKLCKASGVYHVINNAYGLQCARTSKLINR 298          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A0G4G1W0_VITBC (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G1W0_VITBC)

HSP 1 Score: 93.6 bits (231), Expect = 1.390e-20
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    2 GDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLI 74
            GD++  DV  ++ A+   G AD VLCV TTTS FAPR+PD VD+VA++CS +GV H++NNAYG+QCS+ C L+
Sbjct:  196 GDALCTDVPAIEAAIARVG-ADSVLCVSTTTSTFAPRVPDSVDQVAQLCSRVGVPHIVNNAYGLQCSKCCHLV 267          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A7S0Y830_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y830_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.820e-20
Identity = 43/76 (56.58%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 QGDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            +GDSV+ D   ++ A+     +DKVL ++TTTSCFAPR+PD VDEVA++C +  V HVINNAYG+QC++T +LINR
Sbjct:  214 EGDSVVTDTQAMEQALNEH--SDKVLAIITTTSCFAPRVPDAVDEVAKLCKTYEVYHVINNAYGLQCNKTSKLINR 287          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A7S4A9Y3_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9Y3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.840e-20
Identity = 41/76 (53.95%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 QGDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            +GD V+ D+  ++VA+   G  ++VL V+TTTSCFAPR+PD VD+VA++C +  V HV+NNAYG+QC++T +LINR
Sbjct:  254 EGDEVVTDIDAMEVALNEHG--ERVLAVITTTSCFAPRVPDAVDKVAKLCKASNVYHVMNNAYGLQCAKTSKLINR 327          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A7S3JSH7_9STRA (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSH7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.280e-19
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    2 GDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            GD +  DV  ++ A++  GGA  +L +++TTSCFAPR PD V+ V +IC+   + H+INNAYGVQCS TC  I+R
Sbjct:  219 GDELRTDVHAIEQAIQELGGAQNILAIISTTSCFAPRAPDDVESVGKICAKFNIFHIINNAYGVQCSITCAAISR 293          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A5J4XJZ9_9CHLO (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XJZ9_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 2.150e-19
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    2 GDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLI 74
            GD +  D+  VK  VE  G A+ ++CVVTT+SCFAPR  DK+ ++A++CSS+G+GHVINNAYGVQ +  C+LI
Sbjct:  196 GDQLTTDLEAVKTQVEKLG-AESIVCVVTTSSCFAPRGADKLVDIAKLCSSVGIGHVINNAYGVQSAALCKLI 267          
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Match: A0A1Y1I1V3_KLENI (O-phosphoseryl-tRNA(Sec) selenium transferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1V3_KLENI)

HSP 1 Score: 89.7 bits (221), Expect = 3.430e-19
Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 QGDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARICSSIGVGHVINNAYGVQCSRTCRLINR 76
            +GD +  DVA ++ A     G+D+++CV+TTTSCFA R PD+V+EVA++C  +GVGH+INNAYGVQC+  C  I +
Sbjct:  195 EGDQLRTDVAAIQ-AKSAELGSDQIVCVLTTTSCFATRAPDRVEEVAKLCQKLGVGHIINNAYGVQCAVICGSITQ 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22003.5821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G571_ECTSI5.400e-3280.26O-phosphoseryl-tRNA(Sec) selenium transferase n=2 ... [more]
A0A7R9VU14_9STRA4.690e-2264.00O-phosphoseryl-tRNA(Sec) selenium transferase (Fra... [more]
A0A7S1ZJX1_TRICV1.050e-2162.16O-phosphoseryl-tRNA(Sec) selenium transferase (Fra... [more]
A0A448Z7C0_9STRA9.950e-2156.58O-phosphoseryl-tRNA(Sec) selenium transferase n=1 ... [more]
A0A0G4G1W0_VITBC1.390e-2056.16O-phosphoseryl-tRNA(Sec) selenium transferase n=1 ... [more]
A0A7S0Y830_9STRA1.820e-2056.58O-phosphoseryl-tRNA(Sec) selenium transferase n=1 ... [more]
A0A7S4A9Y3_9STRA4.840e-2053.95O-phosphoseryl-tRNA(Sec) selenium transferase (Fra... [more]
A0A7S3JSH7_9STRA1.280e-1950.67O-phosphoseryl-tRNA(Sec) selenium transferase n=1 ... [more]
A0A5J4XJZ9_9CHLO2.150e-1956.16O-phosphoseryl-tRNA(Sec) selenium transferase n=1 ... [more]
A0A1Y1I1V3_KLENI3.430e-1952.63O-phosphoseryl-tRNA(Sec) selenium transferase n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008829SepSecS/SepCysS familyPFAMPF05889SepSecScoord: 2..76
e-value: 4.5E-21
score: 75.0
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 1..76
e-value: 2.0E-24
score: 87.6
IPR019872O-phosphoseryl-tRNA(Sec) selenium transferasePANTHERPTHR12944SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGENcoord: 1..75
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 7..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22003contigH-paniculata_contig22003:363..593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22003.5821.1mRNA_H-paniculata_contig22003.5821.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22003 363..593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22003.5821.1 ID=prot_H-paniculata_contig22003.5821.1|Name=mRNA_H-paniculata_contig22003.5821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
QGDSVLADVAGVKVAVENSGGADKVLCVVTTTSCFAPRLPDKVDEVARIC
SSIGVGHVINNAYGVQCSRTCRLINR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008829SepSecS/SepCysS
IPR015421PyrdxlP-dep_Trfase_major
IPR019872Sec-tRNA_Se_transferase
IPR015424PyrdxlP-dep_Trfase