mRNA_H-paniculata_contig2199.5809.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 1.130e-120 Identity = 293/676 (43.34%), Postives = 407/676 (60.21%), Query Frame = 1
Query: 1405 PIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQY-----LEED----GEGCRFEAVCARCMANRCPDD--PAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSLVEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTS--SQIVSAALVITLSILLLIVVWIVKYLVTVV---PPHDDRRDTGKHLRPRDEFLAKDLVAM--IKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEGLYV 3378
P+++ +C F N +DGG +YS+AS+D I G + N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N+F+C G++ +++D + CRF VC+RC A+ C + A +++ +P+CE E + T + G TLATL + GF+R+S ST+I EC+++ AC GGS V YCAEGY GPYCA+C +GY+ G +C++C S S +V AA + L+ L VV +V LV+VV PP + + + V + +KI++VVWQI+TQ++ V EY GAY+ FL V+ VVN D+G +LS +C D++FY RLL+AT+GP++ + +L TY +A + R E + +++RHLS+ L F+IY++VS T+FETF CD LDDG YLRADY L C + H + YA + ++VYPVGIPC G WLFK+RH EL ++ EL P ADLWEPYKP+ YY+E+VE RR+ LTG VFI+PDS+AQ+A+++LLA + VV E+L+P+ R + WLYRAG+ VV MYLALLL++D+SDER QE FS ++++ H + + V A+GL +
Sbjct: 425 PVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRC-ASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALA--LAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHC---EEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRH------------------------------------------------------------ELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLI 1034
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 1.350e-119 Identity = 299/672 (44.49%), Postives = 403/672 (59.97%), Query Frame = 1
Query: 1405 PIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQY---LEEDGEG-CRFEAVCARCMANRCPDD--PAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSLVEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQ----IVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRDEFLA--KDLVAM--IKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEGLYV 3378
P ++ +C F +N ++DGG IYS+A +D ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +F+C G + +E +GE CRF VC+RC A+ C + V + + +P+CEA E T GGTLATL + G++R+SA ST+I EC+ E+AC GG +V EYCA GYTGPYCA+C +G++ G +SC++C S + +VSA V+ L L VV++ LV+VV + + + R + A K ++ + IKI++VVWQI+TQ++ V EY GAY+ FL V+ VVN D+G +LS++C D+DFY RLL+ T+ P V + +L TY +GVVK RHLS+ L F+IY++VS T+FETF CD LDDG YLR+DY L C + H + YA +MI+VYPVGIPC G WLFKHRH L G E +V L+P ADLWEPYKP+ YY+E+VE RR+ LTG VFI+PDS+AQ+A+++LLA + VV E L+P+ R + WLYR G+ VV MYLALLL++D+SDER QE FS +L++ H +L+ V +GL +
Sbjct: 436 PTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEIEGEDVCRFGLVCSRC-ASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVL----LAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL------------AMGVVK--HRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAV------------------------------------------------------------LKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLLI 1028
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 404 bits (1037), Expect = 1.590e-117 Identity = 257/711 (36.15%), Postives = 354/711 (49.79%), Query Frame = 1
Query: 1423 CDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQYL------EEDGEG-CRFEAVCARCMANRCPDDP-AVAILEETRVPSCEATYEHTTTPQPGG-TLATLTLDRGFFRTSAASTEILECYNENACIGGSLVEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQIVSAALVITLSILLLIVVWIVKYLVTVVPP--HDDRRDTGKHLRP-RDEFLAKDLVAMIKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEGLYVVRETWLRMKQNRTELEGVAGFHDHQRTGRVGKW*VAREDQGTTRNLN 3519
C F N+ DGG +YS A YD I+ R N A GSG N ++C +GQY E++ G CRF VC+ C A+ C D+P +V ++ + VP CE T GG TL L L RG++RTSA S +L+CY E ACIGG+ V +YC EGY G YCA+C GYA+G +SC C + + V + L+ + ++ LV VV D GK L RD + + IKI++V WQI+TQF+SV Y Y FL V+ VVNFD+G +LSVSC +D +FY RL T+GPLV LA TY+I+ ++ R G+ + +HLSI L +F++YSSVS +F+TF C+ LDDGV YLRADY L C++ H MAYA +MI+VYPVGIP WL +RH L +G+ S +C+ G P L L+P DLW YKP RYY+E++E RR+ LTG+ F+ PDSAAQ+A+ V+LA + V +VL+P+ + WLYR G ++ MYLALLLK+D SDE Q F+ +LI H +++ V + + VR + M+ V G Q G GK + + ++ +N
Sbjct: 456 CVFQGNSAV-DGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAAS-CEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRH---SPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGT---SGNCL-------------------------------------GGAPRLDH------------LQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRGLVTMRDQPAANRSVRGSSFAQ--GHDGKTGASESEPQWSKEIN 1107
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 410 bits (1054), Expect = 1.190e-115 Identity = 289/687 (42.07%), Postives = 406/687 (59.10%), Query Frame = 1
Query: 1393 GSQFPIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQY-----LEED----GEGCRFEAVCARCMANRCPDD--PAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSLVEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTS--SQIVSAALVITLSILLLIVVWIVKYLVTVVP--PHDDR----------RDTGKHLRPRDEFLAKDLVAMIKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEGLYV 3378
G +++ +C F N ++DGG +YS+AS+D I G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N+F+C G++ +++D + CRF VC+RC A+ C + +++ +P+CE E + T + G TLATL + GF+R+S ST+I EC+++ AC GGS + YC+EGY GPYCA+C +GY+ G +C++C S S +V AA + L++ ++V +V LV+VV P R T L+ R + +KI++VVWQI+TQ++ V EY GAY+ FL V+ VVN D+G +LS +C D++FY RLL+AT+GP++ + +L TY +A + R E + +++RHLS+ L F+IY++VS T+FETF CD LDDG YLRADY L C + H + YA + ++VYPVGIPC G WLFK+RH EL + EL P ADLWEPYKP+ YY+E+VE RR+ LTG VFI+PDS+AQ+A+++LLA + VV E+L+P+ R + WLYRAG+ VV MYLALLL++D+SDER QE FS ++++ H + + V +GL +
Sbjct: 397 GPSTTVKFLDCLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRC-ASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMV--LVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVP--LTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHC---EEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRH------------------------------------------------------------ELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLI 1015
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 379 bits (973), Expect = 4.840e-108 Identity = 249/766 (32.51%), Postives = 364/766 (47.52%), Query Frame = 1
Query: 1159 GSTTFIRNVAATTHGGAVHVEAIKSFT-----VAXXXXXXXXXXXXXXXXXXXXITTEYVSLVGVHFEHNTASWGGGLAAFSSGS-----QFPIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQYLE----EDGEGCRFEAVCARCMANRCPDDPAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSL-VEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQ--IVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRD----EFLAKDLVAMI-----KILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDS--DFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSL-DEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEG 3369
G TTF N AA GGA+ + + + ++ T GV F++N+A+ GG +A + +G+ P + C F+ NA T+ GGG+ S +N N+A G GN F C AG+++E E+G+ R++ VC C + + ++ E P+C ++T + + G +L TL++ RG++R S +S IL CYN AC+GG V+ C GY GPYCA+C+SGYA+ ++C C+ + +V+AA + VV HL + L + L AM+ KI++VVWQI+TQF S + Y+ F+ + VVNFD+G +++ C D DF+ RLLV+TLGPL+ V LA+TY++A + S + GV IR +HLS LL FL+YSSVS TVF+ F CDKLDDG YLRADYR+ CTS KH YA MI +YPVGIP L +L HR R++ T + ADLWEPY+P R+Y+E++E RRVLLTGV VFI+P++AAQ+AV +L+A + +V+E+LAPY+ + WL R G+++V L M+ LLLK+D+SDER Q F+ +++ HC++ + V E
Sbjct: 448 GRTTFWNNTAAAGDGGALGLYGSMALSSSVVNISGDVTFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAVGGAVATYGTGNGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADVGGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFVNISDTLFE---GNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERS--ECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAA-------------------IAVVXXXXXXXXXCAHLISGEVSEQSCLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPL-LYAYLLHHR------------------------------------------------------------RDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEA 1128
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 366 bits (939), Expect = 2.700e-104 Identity = 258/778 (33.16%), Postives = 370/778 (47.56%), Query Frame = 1
Query: 1153 IHGSTTFIRNVAATTHGGAVHVEAIKSFTVAXXXXXXXXXXXXXXXXXXXXITTEYVSLVGVHFEHNTASWGGGLAAFSSGSQ------FPIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQYLEE-DGEGCRFEAVCARCMANRCPDDPAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSLVEE-YCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQIVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRDEFLAKDLVAM--IKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEGLYVVRETW--LRMKQNRTELEG-VAGFHD 3447
++GST F+ N + GGA+ S + T +LVG+ F NTA GG + +SG +P + C F N GG I S + D+IE N A G N CP G +++ + EG R+EAVC C A D + + E VP+C T E+T + ++ + +D G++R + +T +L CYN +AC+GG E YC EGY GPYCAIC Y + C C+ V VI +S L + +V YLV+ ++R L KD V+ +KI++VVWQI+TQF+ V Y Y+RFL VI V+NFDIG ++S C +D DF+ LL AT+GP++ V +L TY A A YR DE + ++ ++H+S +LL FL+YSSVS+TVF F CD L D YLRADY + C+STKHR +AV M+++YPVGIP G+ L+ R A L+D S H P K + LWEPY P RYY E+VE RR+LLTGV VFI+P+SAAQIA+ +L+ + V+ EVLAP+ + + W+ R G+I++ + M++ALLLK+D+SDER Q F+ +L+V + +L AE +++ W ++M++N + G V G D
Sbjct: 347 VNGSTAFVDNTCEGS-GGAIKTSGAVSLALEDVVFTGNSAQSRGGALYISN-TAVGPTLVGLTFTGNTAHTGGAVYVTASGVDAVFGDGYPTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSVFRRNYIECPPGSFVDYYESEGGRYEAVCDGCPAA----DDGITMGVENLVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEGVAVG---VIFVSALAVGGAALVAYLVS-----NEREGXXXXXLI---VLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATY--AAASYRNRGSDE-AIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREA---------------------------------LKDGSCRQAH-----------PQAKT---------------ISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWM----WCAVKMEENGSPWSGRVRGVKD 1041
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 365 bits (937), Expect = 9.100e-104 Identity = 234/684 (34.21%), Postives = 335/684 (48.98%), Query Frame = 1
Query: 1342 FEHNTASWGGGLAAFSSGSQFPIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQYLEE-DGE-GCRFEAVCARCMANRCPDDPAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSL-VEEYCAEGYTGPY-----CAICKSGYAAGSLYSCQACTDTSSQIVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRDEFLAKDLVAMIKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTM-DSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAE 3366
FE N+A GG + + ++ RNC F+ N+ T G I ++ ++ NI G N +C AG Y E+ +GE RFE VC C P+ + + P+CE EHTT +PG TL TL + G++R ++ S +IL CYN +AC GG + +CA GY GP C++C++G+A ++C C+ + Q + A VI + + +V I KYL++ D + G R L V +KI++VVWQI+TQF V Y AY+ FL I VVNFD+G L+ C D DF+ RLL+ TLGPLV V L TY +A + + R +HLS LLL FLIYSSVS+TVF+TF C+ LDDG++YLR DY +HCT KH+ F YA IM++VYPVGIP + LF+ R L G+ R +K +P A LWEPY+P R+Y+E++E RR++LTGV FIFP+ AAQIA+ +L+A + +VFEV++PY + WL R G+++V L M+ ALLLK+D+S E Q+ F+ + + H +L++ + E
Sbjct: 476 FEGNSAYVGGAMRLGGT-----VDVRNCSFLSNSATSRGLAI-AVVAFANISGASFDRN----------------------------------------------------ELYCEAGLYREDTEGEPSARFETVCLDC-----PECDDCHVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLST---EVDEGNAGCFHR---RILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAG-GQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVL-----------------GDARADKTVA--------------------------------------------QPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVE 1028
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 368 bits (944), Expect = 7.210e-102 Identity = 242/681 (35.54%), Postives = 348/681 (51.10%), Query Frame = 1
Query: 1348 HNTASWGGGLAAFSSGS--QFPIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQY---LEEDGEGCRFEAVCARCMA-NRCPDDPAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSL-VEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQIVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRDEFLAKDLVAMIKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTM-DSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAE 3366
H+ GG +G P C+F N + GG + ++A + NI GN A G XXXXXXXXXXXXXXX GN C G + E++ RFE VC C A + C + I + T P+CE EHT+ + G TL TL LD G++R + S IL CYN +AC GG + +CA GY GPYCA+C++ Y++ ++C+ C+ + + ++ I + + +L + +Y+++ + G R L V +KI++VVWQI+TQF + G Y+ FL I V+NFDIG +L+ C D DF+ RLLV T+GPLV LA TY I ++ S D G+ KI +H + LL F++YSSVS+TVF+TF C+ LDD V+YLRADYR+HCT KH+ F YA IMI+VYPVGIP + LF+ RH L G++ + L++ G LWEPY+P R+Y+E+VE RRV+LTGV VFIFP+ AAQIA+ +L+ + ++FE+L+PY+ + WL R G+++V L M+ LLLK+D+S E Q FS + + H ++++ + E
Sbjct: 1007 HSGGEGNGGAVYMYAGELQDEPSTISGCNFSDNVAEEAGGAVKTLAGFQNIFSCHFEGNSADVGGAMRLGGEATXXXXXXXXXXXXXXXLAVDVVESASIHDSTFN---GNQLSCGKGWFRSDTEQEDPNARFETVCVDCPAWDECFE---CIIADGTITPTCEVPLEHTSADEDGLTLETLKLDEGYWRATTESVIILACYNADACAGGKTGADSFCASGYQGPYCAVCETDYSSSLAHTCKHCSSSRRRGLTVIAAIAVIVTVLAFAAVFQYMLST------EHEEGIFGCFRRRVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSA-SADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLADAGADK---TVALSISG----------------------------------------------------------LWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDVSGESNHSQAIFSRVFVAGHVLMILVIVVE 1613
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE) HSP 1 Score: 352 bits (903), Expect = 7.440e-102 Identity = 212/558 (37.99%), Postives = 296/558 (53.05%), Query Frame = 1
Query: 1702 LEEDGEGCRFEAVCARCMA-NRCPDDPAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSL-VEEYCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQIVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRDEFLAKDLVAMIKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTM-DSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAE 3366
++ED RFE VC C A + C + I + T P+CE EHT + G TL TL +D G++R + S IL YN NAC GG + +CA GY G YCA+CK+ Y+ + C C+ + Q + I + + +L V I +Y+++ + G R L V +KI++VVWQI+TQF Y G Y+ FL I V+NFDIG +L+V C + DF+ RLLV T+GPLV LA TY I +Y S GV KIR +H + LL FL+YSSVS+TVF+TF C+ LDD V+YLRADYR+HCT KH+ F YA IMI+VYPVGIP LF+H H L G++ + L++ G LWEPY+P R+Y+E VE RRV LTGV VFIFP+ AAQIA+ +L+ + ++FE+L+PY + WL R G+++V L ++ +LLK+D+S E Q FS +L+ H ++++ + E
Sbjct: 217 MQED-PNVRFETVCLECPAWDECFE---CTIADGTVTPTCEVPLEHTAADEDGLTLETLKIDEGYWRATTESVIILASYNANACAGGKTGADSFCASGYQGTYCAVCKTDYSPSLAHICTHCSSSRRQGLMCIAAIAVIVTVLAFVAIFQYMLST------EHEEGILWCFRRRVLGAVPVQSLKIIVVVWQILTQFADTANVTYPGLYQDFLSAIDVINFDIGSVLAVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVLRRYSA-SGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILADAGADK---TVALSISG----------------------------------------------------------LWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDVSGESDQSQAVFSGVLLAGHVLMILVIVVE 702
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 368 bits (944), Expect = 8.520e-102 Identity = 235/691 (34.01%), Postives = 346/691 (50.07%), Query Frame = 1
Query: 1336 VHFEHNTASWGGGLAAFSSGSQ--------FPIEYRNCDFIKNAVTQDGGGIYSIASYDNIEGVRMTGNFAGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNFHCPAGQYLEE-DGEGCRFEAVCARCMANRCPDDPAVAILEETRVPSCEATYEHTTTPQPGGTLATLTLDRGFFRTSAASTEILECYNENACIGGSLVEE-YCAEGYTGPYCAICKSGYAAGSLYSCQACTDTSSQIVSAALVITLSILLLIVVWIVKYLVTVVPPHDDRRDTGKHLRPRDEFLAKDLVAMIKILLVVWQIITQFTSVTRTEYMGAYRRFLQVIGVVNFDIGLMLSVSCTMDSDFYARLLVATLGPLVFVAMLATTYSIACAKYRRFSLDEVGVVKIRQRHLSILLLAAFLIYSSVSTTVFETFDCDKLDDGVDYLRADYRLHCTSTKHRIFMAYAVIMIMVYPVGIPCSLGVWLFKHRHALTSMGSEPDSVSCMLNLEGNIRPEKVPTSFSFALRDHSTEHDHVGGTDGAHAGRPDLKRELSSTSTDASLELEPFADLWEPYKPNRYYWEIVEFSRRVLLTGVGVFIFPDSAAQIAVIVLLAGGYGVVFEVLAPYKRSLNAWLYRAGYIVVVLGMYLALLLKIDLSDERWSRQETFSVLLIVVHCMLLVGVFAEGLYV 3378
++F N A GG + + SSG + FP+ Y++C F N + GG I + A YD N AG G GN C G YL+ DG+ R++ VC C N D V++ RVP C +HT + T+ TL L G++R + S +L CYNE+AC+GG + +C GY GPYC++C GY+ ++C C D I +I++++ V+++ + + G + + + IKI++VVWQI+TQF+SV Y Y+RFL + ++NFD+ + S C ++ DF+ RLLVAT+GPLV +A+LA TY++A RR S E + KIR +H+S++LL FL+YSSVS TVF++F C+ LDD YLRADYR+ C S++H+ F +A IMI+VYPVGIP G L+KHR L S AG KR+ S +++P +DLW PYKP R+Y+E++E RR+ LTGV VFI+P++AAQ+AV +++A + V VLAPY +A + G+++V MY ALL K+D+SDER QE F+ +L+ H ++V V E + +
Sbjct: 1137 INFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFS--GNVLSCENGMYLDSVDGD--RYQTVCDGCPVNN--SDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGI---------AIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVA---KRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKS----------------------------------------------EDAG----KRQTSP-------QVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVI 1752 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2199.5809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2199.5809.1 >prot_H-paniculata_contig2199.5809.1 ID=prot_H-paniculata_contig2199.5809.1|Name=mRNA_H-paniculata_contig2199.5809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1113bp MVTLPAATAAATAVLIACGIGNVNAAPCNRQSVSLNVDDSAGAAALASILback to top mRNA from alignment at H-paniculata_contig2199:681..19015- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2199.5809.1 ID=mRNA_H-paniculata_contig2199.5809.1|Name=mRNA_H-paniculata_contig2199.5809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18335bp|location=Sequence derived from alignment at H-paniculata_contig2199:681..19015- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2199:681..19015- >mRNA_H-paniculata_contig2199.5809.1 ID=mRNA_H-paniculata_contig2199.5809.1|Name=mRNA_H-paniculata_contig2199.5809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6678bp|location=Sequence derived from alignment at H-paniculata_contig2199:681..19015- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |