prot_H-paniculata_contig21973.5806.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21973.5806.1
Unique Nameprot_H-paniculata_contig21973.5806.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
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BLAST of mRNA_H-paniculata_contig21973.5806.1 vs. uniprot
Match: D7G298_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G298_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 6.080e-23
Identity = 52/86 (60.47%), Postives = 60/86 (69.77%), Query Frame = 0 
Query:    7 ARRNMENKAAIAVEFSQADEQEVLTILAKVALSYHDQRTGRDAAQREFTCALAPDDFREQLHLSFGLRLTDAQFSALFHTMDTNSD 92
            AR+   N AA+ VEFS  D    L +L K+ALSYHDQRTG +AAQR+F CAL P  FR QL  SFG+RLTD QF+ALF  MD N D
Sbjct:  154 ARKRDANTAAVEVEFSAEDRASALLLLGKIALSYHDQRTGHEAAQRDFACALGPMAFRLQLFRSFGIRLTDRQFAALFDVMDINRD 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21973.5806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G298_ECTSI6.080e-2360.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 56..119
e-value: 7.8E-7
score: 31.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 88..100
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 75..110
score: 12.031
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 58..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21973contigH-paniculata_contig21973:1457..3594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21973.5806.1mRNA_H-paniculata_contig21973.5806.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21973 2..3907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21973.5806.1 ID=prot_H-paniculata_contig21973.5806.1|Name=mRNA_H-paniculata_contig21973.5806.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
MQREAKARRNMENKAAIAVEFSQADEQEVLTILAKVALSYHDQRTGRDAA
QREFTCALAPDDFREQLHLSFGLRLTDAQFSALFHTMDTNSDGYVDGAEF
LHFFFGLGNGERAREQKQHEVNCQVRAQKLRLDKFPAISPFLGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair