prot_H-paniculata_contig2197.5804.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2197.5804.1
Unique Name	prot_H-paniculata_contig2197.5804.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	557

Homology

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: D8LTH4_ECTSI (BolA protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTH4_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 5.050e-62
Identity = 119/183 (65.03%), Postives = 136/183 (74.32%), Query Frame = 0

Query:    1 MLPSTRQLLLGAVLLTGQRSSSAFHVAPTFS---HARL------RCRSRAVLRKSPVLHDVQDAAGVRMSSTSTSMQDTIERRLKETLSPVHLEVINESHMHSGPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKADPSM 174
            M+ +TRQLLLGA L+ G+  + AFHV    S   H R       +C S +V R+         +AG  M++ S  MQ+TIE RL E LSPVHLEVINESHMHSGPA ESHFKV+VV++EFEGKPL+ARHRMVN LFAEEM G   KMHALSIQGKTP+QWEAEGHKVAPSPPCMGGSKADPSM
Sbjct:    1 MMSTTRQLLLGACLIAGR--TGAFHVPVASSLSQHTRSTLAVAGKCNSASVRRRFR-------SAGFAMAAASGEMQETIEARLSEALSPVHLEVINESHMHSGPAKESHFKVIVVSDEFEGKPLLARHRMVNALFAEEMKG---KMHALSIQGKTPAQWEAEGHKVAPSPPCMGGSKADPSM 171

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A4R1EY83_9GAMM (BolA protein n=1 Tax=Cocleimonas flava TaxID=634765 RepID=A0A4R1EY83_9GAMM)

HSP 1 Score: 116 bits (291), Expect = 1.190e-27
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 0

Query:   66 SMQDTIERRLKETLSPVHLEVINESHMHSGPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSK 169
            +MQ TIE +L ETL+P  LEVINES+MHSGPATESHFKV+ V++ FEGK L+ARHRM+N   A+E+     ++HAL++   TPS++  +  KVA SP C GGSK
Sbjct:    2 NMQTTIEEKLTETLAPEVLEVINESYMHSGPATESHFKVIAVSDAFEGKMLIARHRMINAALADELQ----QIHALALHTMTPSEYFEKAGKVADSPQCEGGSK 101

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A8J4ZH80_9CHEL (DNA-binding transcriptional regulator BolA n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZH80_9CHEL)

HSP 1 Score: 115 bits (289), Expect = 2.250e-27
Identity = 60/104 (57.69%), Postives = 78/104 (75.00%), Query Frame = 0

Query:   66 SMQDTIERRLKETLSPVHLEVINESHMHSGPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSK 169
            ++Q+TIE++L ETL P  L+VINES+MHSGPATESHFKVVVV+ +FEGK L+ARHRM+N   AEE+      +HAL++   TP ++  +  KVA SP C GGSK
Sbjct:    2 NIQNTIEQKLTETLDPEVLDVINESNMHSGPATESHFKVVVVSNKFEGKMLIARHRMINAALAEELNS----IHALALHTMTPDEYFEKSGKVADSPQCEGGSK 101

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: UPI00109BCE19 (bolA-like protein DDB_G0274169 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BCE19)

HSP 1 Score: 116 bits (291), Expect = 4.460e-27
Identity = 66/129 (51.16%), Postives = 85/129 (65.89%), Query Frame = 0

Query:   46 SPVLHDVQDAAGVRMSS--TST----SMQDTIERRLKETLSPVHLEVINESHMHSGP-ATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGG 167
            SPV    +   G++ S   TST    S+Q TI  +L +   P H+EVINES+MH+ P  +E+HFKVVVV+  F+ KPL+ RHRMVN +   E+      +HALSIQ KTP+QWEA GHKV  SPPC+GG
Sbjct:   18 SPVFRQFERVIGLKSSQFCTSTVQRMSVQATITDKLTKKFQPQHMEVINESYMHNVPKGSETHFKVVVVSALFQDKPLIQRHRMVNDVLKNELESG---VHALSIQAKTPTQWEASGHKVNMSPPCLGG 143

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A3M1WLH9_9GAMM (Transcriptional regulator BolA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1WLH9_9GAMM)

HSP 1 Score: 114 bits (285), Expect = 9.090e-27
Identity = 59/106 (55.66%), Postives = 78/106 (73.58%), Query Frame = 0

Query:   66 SMQDTIERRLKETLSPVHLEVINESHMHS-GPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKA 170
            SMQ  IE +L+E L+P HLEV+NESHMH+  P +ESHFKV VV++ FEG+ LV RHRMVN + A+E+ G   ++HAL++   TP +W AE  +   SPPC+GGSKA
Sbjct:    2 SMQQNIENKLREGLAPDHLEVVNESHMHNVPPGSESHFKVTVVSDRFEGERLVGRHRMVNAILADELAG---RIHALALHTYTPQEW-AERQQAPQSPPCLGGSKA 103

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A1L8FBX4_XENLA (bolA-like protein 1 isoform X1 n=5 Tax=Xenopus TaxID=8353 RepID=A0A1L8FBX4_XENLA)

HSP 1 Score: 115 bits (287), Expect = 1.550e-26
Identity = 62/109 (56.88%), Postives = 78/109 (71.56%), Query Frame = 0

Query:   67 MQDTIERRLKETLSPVHLEVINESHMHSGP-ATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKADPSM 174
            +++ I  +L ETL P HLEV+NES+MH+ P  +E+HFKVVVV+E F GK L+ RHR+VN L  +E+ G    +HALSIQ KTP QWE E   V+ SP CMGGSK DP M
Sbjct:   33 VENAIRSKLSETLKPSHLEVLNESYMHAVPKGSETHFKVVVVSESFLGKSLIQRHRLVNELLKDELAGP---VHALSIQAKTPQQWE-ENPAVSKSPACMGGSKHDPEM 137

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: H3AJZ9_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AJZ9_LATCH)

HSP 1 Score: 115 bits (287), Expect = 1.550e-26
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 0

Query:   57 GVRMSSTSTSMQDTIERRLKETLSPVHLEVINESHMHSGP-ATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKADPSMV 175
            GVR S+    ++ +I  +L + L P HLEV+NES+MH+ P  +E+HFKV+VVTE+F+G PL+ RHR+VN +  EE+ G    +HALSIQ KTP QWE E   ++ SPPCMGGSK D  M 
Sbjct:   22 GVR-STMEKPVEASIRAKLTQHLDPTHLEVLNESYMHAVPKGSETHFKVLVVTEKFKGLPLIQRHRLVNEVLKEELAGT---VHALSIQAKTPQQWE-ENPSISKSPPCMGGSKHDQLMA 136

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: B3RW48_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RW48_TRIAD)

HSP 1 Score: 113 bits (282), Expect = 2.370e-26
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 0

Query:   60 MSSTSTSMQDTIERRLKETLSPVHLEVINESHMHSGP-ATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGS 168
            M  T TS+ + +  RLK    P+HL+VINES+MH+ P  +E+HFKV++V++ F GK L+ RHRMVN L AEE++G+   +HALSIQ KT  QWE   H +  SPPC+GGS
Sbjct:    1 MGLTETSIHNKLSERLK----PIHLDVINESNMHNVPKGSETHFKVIIVSDLFNGKSLLQRHRMVNELLAEELSGS---VHALSIQAKTSQQWEDSNHHITKSPPCLGGS 103

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: X0SQ16_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0SQ16_9ZZZZ)

HSP 1 Score: 113 bits (282), Expect = 2.510e-26
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0

Query:   66 SMQDTIERRLKETLSPVHLEVINESHMHS-GPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKAD 171
            S QDTIE+++ + L P+HLEV+NES+MH+  P +ESHFKV VV+E+FEG+ LV RHRMVN + AEE+ G   K+HAL++   TP +W   G + A SP C GGS AD
Sbjct:    2 SNQDTIEQKITQVLHPMHLEVLNESNMHNVPPGSESHFKVTVVSEKFEGRMLVNRHRMVNEVLAEELNG---KIHALAMHTMTPDEWFEAGGQSADSPQCQGGSAAD 105

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BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: UPI001AAD74AC (bolA-like protein 1 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD74AC)

HSP 1 Score: 114 bits (285), Expect = 2.850e-26
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 0

Query:   67 MQDTIERRLKETLSPVHLEVINESHMHS-GPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKADPSM 174
            ++ +I  +L ++L+P HLEV NES+MH+  P +E+HFKVVVV+E F GKPL+ RHR+VN +  EE+ G+   +HALSIQ KTP QWE E   V  SP CMGGSK DP M
Sbjct:   34 VETSIRSKLTQSLAPCHLEVHNESYMHAVPPGSETHFKVVVVSEAFSGKPLIQRHRLVNDVLKEELAGS---VHALSIQAKTPEQWE-ENPTVTKSPGCMGGSKHDPHM 138

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTH4_ECTSI	5.050e-62	65.03	BolA protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D...	[more]
A0A4R1EY83_9GAMM	1.190e-27	57.69	BolA protein n=1 Tax=Cocleimonas flava TaxID=63476...	[more]
A0A8J4ZH80_9CHEL	2.250e-27	57.69	DNA-binding transcriptional regulator BolA n=1 Tax...	[more]
UPI00109BCE19	4.460e-27	51.16	bolA-like protein DDB_G0274169 isoform X1 n=2 Tax=...	[more]
A0A3M1WLH9_9GAMM	9.090e-27	55.66	Transcriptional regulator BolA n=1 Tax=Gammaproteo...	[more]
A0A1L8FBX4_XENLA	1.550e-26	56.88	bolA-like protein 1 isoform X1 n=5 Tax=Xenopus Tax...	[more]
H3AJZ9_LATCH	1.550e-26	52.50	Uncharacterized protein n=1 Tax=Latimeria chalumna...	[more]
B3RW48_TRIAD	2.370e-26	52.73	Uncharacterized protein n=1 Tax=Trichoplax adhaere...	[more]
X0SQ16_9ZZZZ	2.510e-26	55.14	Uncharacterized protein n=1 Tax=marine sediment me...	[more]
UPI001AAD74AC	2.850e-26	55.96	bolA-like protein 1 n=1 Tax=Rana temporaria TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.300.90		coord: 65..155 e-value: 3.2E-29 score: 102.8
None	No IPR available	PANTHER	PTHR46229:SF2	BOLA-LIKE PROTEIN 1	coord: 53..172
None	No IPR available	PANTHER	PTHR46229	FAMILY NOT NAMED	coord: 53..172
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 476..486
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..33
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 508..526
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..451
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 545..556
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 487..507
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 452..475
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 527..544
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..33
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.529
None	No IPR available	TMHMM	TMhelix		coord: 521..543
None	No IPR available	TMHMM	TMhelix		coord: 325..347
None	No IPR available	TMHMM	TMhelix		coord: 357..379
None	No IPR available	TMHMM	TMhelix		coord: 452..471
None	No IPR available	TMHMM	TMhelix		coord: 217..234
None	No IPR available	TMHMM	TMhelix		coord: 486..508
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 75..150 e-value: 1.7E-26 score: 92.3
IPR036065	BolA-like superfamily	SUPERFAMILY	82657	BolA-like	coord: 57..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2197	contig	H-paniculata_contig2197:5322..9531 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2197.5804.1	mRNA_H-paniculata_contig2197.5804.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2197 5251..11585 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2197.5804.1 ID=prot_H-paniculata_contig2197.5804.1|Name=mRNA_H-paniculata_contig2197.5804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=557bp
MLPSTRQLLLGAVLLTGQRSSSAFHVAPTFSHARLRCRSRAVLRKSPVLH
DVQDAAGVRMSSTSTSMQDTIERRLKETLSPVHLEVINESHMHSGPATES
HFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQ
WEAEGHKVAPSPPCMGGSKADPSMVDSTLSSALRATGRQQEVGGTRWRWG
ARVHNSLWLNNLRLRGSMGFLVAGFLACSVWMLCPRSAKAAVATAVGSAG
KGGKVGVLDFLERYRNLIIDVHYEFERTYGGDVGSRILGEVKPFAKFLDD
VFIEFAERFGAVLDRLHSKQLRKQASVMFVAASQTSGVAPVAAAGLIGQP
LGRTMVLTILSHTYYAVSKFQFFLFALAIKNFKGVTAKQQRENSSVKPIP
KPTRRAPPSLFPKHRRRPVRPAVKPAARSTPMSKDPALIAFRNQTNTMAP
KWLIVVAAFCGPSIATVSAAVALDLKLGKVMPILKSFFLGSVLGSLLAGS
LCFSGAGTELAARWAVLQAMFGLPFQALLNDNLLFSWLVILYMLSQMRGK
SARMQK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002634	BolA
IPR036065	BolA-like_sf