mRNA_H-paniculata_contig2197.5804.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: D8LTH4_ECTSI (BolA protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTH4_ECTSI) HSP 1 Score: 211 bits (536), Expect = 3.700e-59 Identity = 119/183 (65.03%), Postives = 136/183 (74.32%), Query Frame = 3
Query: 72 MLPSTRQLLLGAVLLTGQRSSSAFHVAPTFS---HARL------RCRSRAVLRKSPVLHDVQDAAGVRMSSTSTSMQDTIERRLKETLSPVHLEVINESHMHSGPATESHFKVVVVTEEFEGKPLVARHRMVNTLFAEEMTGATPKMHALSIQGKTPSQWEAEGHKVAPSPPCMGGSKADPSM 593
M+ +TRQLLLGA L+ G+ + AFHV S H R +C S +V R+ +AG M++ S MQ+TIE RL E LSPVHLEVINESHMHSGPA ESHFKV+VV++EFEGKPL+ARHRMVN LFAEEM G KMHALSIQGKTP+QWEAEGHKVAPSPPCMGGSKADPSM
Sbjct: 1 MMSTTRQLLLGACLIAGR--TGAFHVPVASSLSQHTRSTLAVAGKCNSASVRRRFR-------SAGFAMAAASGEMQETIEARLSEALSPVHLEVINESHMHSGPAKESHFKVIVVSDEFEGKPLLARHRMVNALFAEEMKG---KMHALSIQGKTPAQWEAEGHKVAPSPPCMGGSKADPSM 171
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 136 bits (343), Expect = 4.300e-32 Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 3
Query: 2697 EYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLKNVL 3350
EYR +VG L+ ST T PD+A+AV + AR + P + + I L +LG + KSN L GF D+DWA D +D K +GY+F N I W S+KQ+ V S+ +AE +A A +E +++ L I C T +FEDN+ STI+L+K + + K I +R++ RE V + Y Q D A + TKGL++VKF +L N++
Sbjct: 36 EYRSIVGSLINLSTRTRPDLAFAVGELARYCDAPGSEHWVALKIILRYLKNTKNLGLCY-RKSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQ-STISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKFVKLLNLV 251
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F) HSP 1 Score: 136 bits (342), Expect = 3.250e-31 Identity = 88/271 (32.47%), Postives = 147/271 (54.24%), Query Frame = 3
Query: 2559 REVLKLYGFDQC*GVPHSADNPPRTESTWGCTVGHRHRSESSGNSTEYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLKNVLM*CLFYS 3371
+++L + D C P T + +G + + + +ST Y+ ++G LMY T T PDI YAV +R ME P + I + D G + + + G G+ D+D+A D++D K +G++F LN AI W S+KQQ+VT SSTEAE +AA + +A++L + ++G + TT++ DN STI LS+ + ++K I VR++ +R+ + + +Y + G+Q A I TK L + F++L+++L C F S
Sbjct: 62 QDILNRFQMDDC--------KPFGTPAEYGLKL-CKDKGGKEVDSTFYKQIIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGVFYK-REDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNI-STIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTKPLKQPAFEKLRSMLGVCSFQS 320
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 144 bits (362), Expect = 7.340e-31 Identity = 87/216 (40.28%), Postives = 120/216 (55.56%), Query Frame = 3
Query: 2688 NSTEYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKR 3335
++ +Y+ VG LMYA T PDIAYAV ++ P + +++ F L D ++GK N L G+VD+DWA D D + +GYVF L AI W S+KQQ V SSTEAE +AA A KEAV+L L + R T L DN+ I L+K + TK I VR + +R+ V +G +A++Y+ DQ A + TKGL+R K R
Sbjct: 1183 DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQ-GAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREKHDR 1397
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 130 bits (327), Expect = 2.160e-30 Identity = 78/205 (38.05%), Postives = 119/205 (58.05%), Query Frame = 3
Query: 2724 MYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRL 3338
M+ +T T PDIA+AV + + + + ++ I L D G ++ +N +EG+VDAD+AED+E + TGYVF L A+ W +++Q++VT S+TEAE +AA A KEA++L L + C R+T +F DN+ ST+ L + + + +TK I VR + IRE V G + +K V Q A + TK L R +FK L
Sbjct: 1 MFLATVTRPDIAFAVGKVSAFLNNHDVNHWNAVKRIIRYLLNTVDRGVLYESGGSNEEIEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQ-STLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPRDRFKAL 204
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 134 bits (338), Expect = 2.910e-30 Identity = 92/269 (34.20%), Postives = 138/269 (51.30%), Query Frame = 3
Query: 2562 EVLKLYGFDQC*GVPHSADNPPRTESTWGCTVGHRHRSESSGNS---TEYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLKNVLM*C 3359
E LK YG + C ++ NP G++ G++ T ++ +VG L Y + T PD+ Y+V+ +R ME+P Q I + G + + L GFVD+D+A DV+D K +GYVF L A+ W S+KQ +VT S+TEAE +AA +A++L + G IG TTLF DN STI LSK + ++K I VR+Y +R+ V E ++ K+ DQ + I TK + F+RL+ + C
Sbjct: 119 ETLKKYGMEGC----NAVKNP--------IVPGNKLSRAGGGDAADPTMFKQLVGSLRYLTA-TRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNS-STIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLRRRMEVC 372
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A0J7KRG1_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KRG1_LASNI) HSP 1 Score: 142 bits (357), Expect = 3.170e-30 Identity = 82/222 (36.94%), Postives = 127/222 (57.21%), Query Frame = 3
Query: 2688 NSTEYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLKNVLM 3353
++ YR+ VG LM+ + + PDIA+AV+ A++ + + + + IF L DLG + + L GF DAD+A D+E + TGY+F+L + W SR+Q++VT S+TEAE IAA A KEAV+L L +G C T L+ DN+ S I ++K + + +TK I VR++ IR+ V + YV Q A I TK L++ F+RL+ ++
Sbjct: 1388 SNVPYREAVGSLMFVAIVSRPDIAFAVNTASKFLNNHDQSHWQAVKRIFAYLVGTADLGIEYRSSGSESKLVGFSDADYAGDLETRRSTTGYLFSLASGPVTWSSRRQKIVTLSTTEAEYIAASSAAKEAVWLRNLLDEVGYRCDSPTVLYVDNQ-SAIKIAKNPEFHERTKHIDVRYHHIRKMVENAAIQVLYVPSEMQKADILTKALSKESFRRLRESMV 1608
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH) HSP 1 Score: 140 bits (353), Expect = 8.140e-30 Identity = 95/265 (35.85%), Postives = 143/265 (53.96%), Query Frame = 3
Query: 2562 EVLKLYGFDQC*GVPHSADNPPRTESTWGCTVGHRHRSESSGNS---TEYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRS--TTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLK 3341
E++K YG + C +S NP G + +G++ TE++ ++G L Y +T T PD+ ++V+ +R ME P Q I + DLG ++ + L GFVD+D+A DV+D K +GYVF L AI W S+KQ +VT S+TEAE ++A +AV+L + L +GCR+ T +F DN STI LSK + ++K I VR++ +RE V+EG + Y DQ A I TK + R F+ L+
Sbjct: 1077 EIIKKYGMEGC----NSVKNP--------IVPGQKLTKAGAGDAVDPTEFKQLIGSLRYLTT-TRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYE-RGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNV--LEEIGCRQEGGTLVFCDNS-STIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELR 1324
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A2K3M244_TRIPR (Copia-type polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M244_TRIPR) HSP 1 Score: 130 bits (326), Expect = 1.970e-29 Identity = 92/273 (33.70%), Postives = 139/273 (50.92%), Query Frame = 3
Query: 2562 EVLKLYGFDQC*GVPHSADNPPRTESTWGCTVGHRHRSESSG---NSTEYRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRS--TTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLKNVLM*CLF 3365
E+LK + + C +S NP G + + + G +ST Y+ MVG LMY T PD+A++V AR ME P + I + G + K N L G+ D+D+A D++D K +GYVF + A+ W S+KQ ++T S+TEAE IAA +A++L + L V CR+ TTL+ DN STI LSK + ++K I VR++ +R+ R+G + + +Q A TK L F R +++L C F
Sbjct: 38 EILKRFNMENC----NSVCNP--------IVPGSKLKKDEDGIXCDSTSYKQMVGCLMYLLA-TRPDLAFSVCLVARFMERPTELHVASVKRILRYVKGTVSYGLWFE-KGKNDELTGWSDSDYAGDLDDRKSTSGYVFMIGSKAVSWSSKKQPIITLSTTEAEFIAAANCACQAIWLAKM--LDHVSCRKEECTTLYCDNS-STIKLSKNLVMHGRSKHIDVRFHFLRDLTRDGKIQLLHCSSSEQIADTMTKALTLENFCRFRDLLGMCQF 293
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 127 bits (320), Expect = 2.520e-29 Identity = 81/217 (37.33%), Postives = 109/217 (50.23%), Query Frame = 3
Query: 2700 YRDMVGLLMYAST*T*PDIAYAVHQAARRMEDPCRQDFSICNCIFGCLSTVPDLGSTHDGKSNNHGLEGFVDADWAEDVED*KCKTGYVFNLNRDAIGWCSRKQQLVTWSSTEAENIAAGEAEKEAVYLGGLPGLIGVGCRRSTTLFEDNK*STINLSKGYDAYCKTKCIRVRWYGIREWVREGMLASKYVQPGDQPAGISTKGLNRVKFKRLKNVL 3350
Y+ +G LMYA PD+AY + ++ P C F L D DGK L G+VDADWA DV D +GY F L AI W S+KQ + SSTEAE IAA A KEA +L IG C+ +T L DN+ S + ++ + +TK I VR++ +RE V G + +YV GDQ A + TKGL + K + +
Sbjct: 14 YQSGIGSLMYAMLGMRPDLAYTIGMLSQHTAKPGEAHQRALVCAFKYLRGTADYQLVFDGKKPWE-LTGYVDADWAGDVNDRHSISGYTFLLAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQ-SAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGLVKAKHDKFSEAM 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2197.5804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2197.5804.1 >prot_H-paniculata_contig2197.5804.1 ID=prot_H-paniculata_contig2197.5804.1|Name=mRNA_H-paniculata_contig2197.5804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=557bp MLPSTRQLLLGAVLLTGQRSSSAFHVAPTFSHARLRCRSRAVLRKSPVLHback to top mRNA from alignment at H-paniculata_contig2197:5251..11585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2197.5804.1 ID=mRNA_H-paniculata_contig2197.5804.1|Name=mRNA_H-paniculata_contig2197.5804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6335bp|location=Sequence derived from alignment at H-paniculata_contig2197:5251..11585+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2197:5251..11585+ >mRNA_H-paniculata_contig2197.5804.1 ID=mRNA_H-paniculata_contig2197.5804.1|Name=mRNA_H-paniculata_contig2197.5804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3342bp|location=Sequence derived from alignment at H-paniculata_contig2197:5251..11585+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |