prot_H-paniculata_contig21956.5799.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21956.5799.1
Unique Nameprot_H-paniculata_contig21956.5799.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig21956.5799.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.860e-31
Identity = 69/147 (46.94%), Postives = 89/147 (60.54%), Query Frame = 0
Query:    1 WAALQYKYDGNTKEARRECHDKLHTTRMQSGDDPEDFLFVMDGYRDRLEEMEQPIPDERYEDIILRALPAEYERVRIASCEKRDFNLADIRHMVSTMYTDYLSRPNTANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 147
            W  L+  +DG+TKEARR C  KL  T M+SG+DP DFL  MD  R RLE+M + IPDE YED++LRAL  EY  +R  S + R F L +IR  +  MY D LSR ++   VAGRGVAM A         +++ C  C + GH   +C
Sbjct:   64 WKTLEDSFDGSTKEARRACRYKLFHTTMKSGEDPSDFLAKMDDLRLRLEDMGEKIPDESYEDVLLRALSKEYYFIRQTSHKDRTFGLTEIRTTMVNMYIDELSRKSSGPSVAGRGVAMSAES-------SNVQCRNCQEFGHYANEC 203          
BLAST of mRNA_H-paniculata_contig21956.5799.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.600e-11
Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 0
Query:    1 WAALQYKYDGNTKEARRECHDKLHTTRMQSGDDPEDFLFVMDGYRDRLEEMEQPIPDERYEDIILRALPAEYERVRIASCEKRDFNLADIRHMVST---MYTDYLSRPNTANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 147
            W A   ++D  T+EARR CH++L   R  +G+DP DF       + RL  + + +    Y DI+L  L    E   I     RD N+A +  + +T   ++ D  SR  +  +V+GRG AM A+  SD        C  C + G  +RDC
Sbjct:  116 WRAQHERFDAQTQEARRACHNELFNLRHLAGNDPIDFFTKGWDLKLRLMVLGEEVSSPVYLDIMLSGLTKAPEFTFIREMHYRD-NIASVDSLQATANRIFVDQQSRNASGPMVSGRGAAMAAASSSD-------QCHRCKEYGPFQRDC 257          
BLAST of mRNA_H-paniculata_contig21956.5799.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.660e-10
Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 0
Query:    1 WAALQYKYDGNTKEARRECHDKLHTTRMQSGDDPEDFLFVMDGYRDRLEEMEQPIPDERYEDIILRALPAE--YERVRIASCEKRDFNLADIRHMVSTMYTDYLSRPNTANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 147
            W AL  ++D  T+EARR CH++L   R  +G DP DF       + RL+ + + + D  Y DI+L  L     +E +R         ++  ++   +  + D  SR  +  +V+GRG AM  +  +D        C  C   GH +RDC
Sbjct:   96 WRALNERFDAQTQEARRACHNELFNLRHLAGGDPIDFFTKGWDLKLRLKVLGEEVSDLVYLDIMLSGLTKAPVFEFIREMHYRDNFTSVDSLQATANCFFVDQHSRNASGPVVSGRGAAMAVASDTD-------QCRRCKAYGHFQRDC 237          
BLAST of mRNA_H-paniculata_contig21956.5799.1 vs. uniprot
Match: UPI000DEC40E4 (LOW QUALITY PROTEIN: uncharacterized protein LOC112703916 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DEC40E4)

HSP 1 Score: 52.4 bits (124), Expect = 4.390e-5
Identity = 36/148 (24.32%), Postives = 62/148 (41.89%), Query Frame = 0
Query:    1 WAALQYKYDGNTKEARRECHDKLHTTRMQSGDDPEDFLFVMDGYRDRLEEMEQPIPDERYEDIILRALPAEYERVR-IASCEKRDFNLADIRHMVSTMYTDYLSRPNTANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC 147
            W  L+  +       R    D+ H  RM       D L  ++G    LE +E  I DE     ++ +LP+ YE ++ +    K   N  ++    S +  +     N  +  +   +  ++     G R   +TC+ CGK GH+KR+C
Sbjct:   39 WDKLERLHQAKGISNRLLLKDQFHNLRMDHNVKISDHLSAINGIISELEAIEVKIDDEDKALWLILSLPSSYEYIKPVLMYGKETLNFEEV---ASKLIAEERRMKNEGSTSSDLALVARSDNYGKGNRGRSVTCWKCGKSGHVKRNC 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21956.5799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE1.860e-3146.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE2.600e-1132.67Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KC00_9PHAE1.660e-1030.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000DEC40E44.390e-524.32LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..147
NoneNo IPR availableGENE3D4.10.60.10coord: 111..147
e-value: 1.1E-5
score: 27.3
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..89
e-value: 1.9E-11
score: 43.8
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 133..147
e-value: 2.9E-5
score: 23.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 134..147
score: 10.197
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 121..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21956contigH-paniculata_contig21956:2839..3279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21956.5799.1mRNA_H-paniculata_contig21956.5799.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21956 2839..3279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21956.5799.1 ID=prot_H-paniculata_contig21956.5799.1|Name=mRNA_H-paniculata_contig21956.5799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
WAALQYKYDGNTKEARRECHDKLHTTRMQSGDDPEDFLFVMDGYRDRLEE
MEQPIPDERYEDIILRALPAEYERVRIASCEKRDFNLADIRHMVSTMYTD
YLSRPNTANLVAGRGVAMQASGGSDGGRRNHITCFFCGKRGHLKRDC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf