mRNA_H-paniculata_contig219.5785.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig219.5785.1
Unique NamemRNA_H-paniculata_contig219.5785.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig219.5785.1 vs. uniprot
Match: A0A6H5KU46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU46_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 6.800e-25
Identity = 215/649 (33.13%), Postives = 270/649 (41.60%), Query Frame = 1 
Query:  721 IPVSPPSSPAYVATQHMPVPEAMKEARGAGAETVGAEEAKEDVSVLLVSNVTKAEVESSSGVGKPVAPTKPIGVPATAIPPSAGVPSPAAATTVNTVVAATDAGSTGDSSKQTQASAIAAXXXXXXXXXPVKLGRGRKLCPNCHALTKSAVKQCRECNHIFSPACSRLRPAPRADPKEIEDLTVTSRRRLRPSQRLIEYEC--EAVGPSSLAPTGASGGAXXXXXXXXXXXXASSEAGKGPGLGTATRRPLATNIMNAGGGGANLIAASGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSHKRKVPLPPGVAXXXXXXXXXXXXXXXXXXXXXAGR---PVPSPPTNGP----------DRTLIARNLLAQAEPKL-----GPAIVPTGGPSPSAVAPGPLLFLPSASTPDDHDAWPAQSSYLPSGHDQQQLRQQGLVTPPGSA-----------EDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLSASFSLVPQQRGXSGGGDV-IDLLAASQDKDPFEGVEL-WLGDERRLREQQXXXXXXXXXXXGYVPAVSLSLSPVTGGLSAFPVAVTGGSVGXXXXXXXXXXXGGGPIEQR--ALSLEESMELLGDGD--LMWSPSRTTSAESSSN 2556
            IP+SPPSSP +VA   +P                 A EA+E V+ ++     K E  +     +           A   PP+ G+P+ A A  V   V          SS    A+A+           PV+LGRGRKLCP+C ALTKSAVKQCR C+H+F+P  SR+R A   +PKE ED  V  RRR RPSQRL+E      A GP   APTG                          G   + RRPLA  +   GGG  N   ASG                                         KRSHKRKVPLPPGV  XXXXXXXXXXXXXXXXXXXX      P  +    GP          +R  +A +L+A   P        P + PT  P+      GPLLF+  A  P    A P+ +S      D + L   G++  P +A              X X                         ++  A  +L P +R  SGGG++ +DL A  QD+DPF GVE+ WL +        XXXXXXXXXXX   P V             FP+    G+                 +EQ        +S ELLGD D  LMW+P RT S  + +N
Sbjct:  108 IPISPPSSPTHVAPTRLPA----------------AAEAQEVVAAVV--EAPKPETAAXXXXXQ-----------ALPSPPAPGLPASAVAEGVGGPV----------SSSGPPAAAV-----------PVRLGRGRKLCPSCKALTKSAVKQCRLCHHVFNPV-SRMR-AQHREPKENEDAPVLPRRRHRPSQRLLESRVVSAAAGPQEAAPTGGEAAV---------------------GRAASGRRPLAAFM---GGGDTNQRVASGAMAATPVATNKTGAVSASGEQAP------------------KRSHKRKVPLPPGVVPXXXXXXXXXXXXXXXXXXXXXXXXXAPAAASEVTGPHGILPRLSLPERQRVAEDLVASPAPSHVLVPESPELAPTATPA------GPLLFI--APPP----ASPSSNSPSSLEDDPEWLPHSGVIVSPAAAFVQQHQERXXXXXXXWXNQQNQLYLAGAATSLTGLLLGDNQEEEEEAELAL-PVRRHESGGGEIDLDLSADCQDRDPFAGVEITWLENGXXXXXXXXXXXXXXXXXXXXAPTV-------------FPLVSRDGTT----------------MEQHRSVFPSAQSTELLGDADDALMWNPLRTPSVGADAN 620
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BLAST of mRNA_H-paniculata_contig219.5785.1 vs. uniprot
Match: D8LSG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 4.730e-19
Identity = 81/196 (41.33%), Postives = 91/196 (46.43%), Query Frame = 1 
Query: 1108 PVKLGRGRKLCPNCHALTKSAVKQCRECNHIFSPACSRLRPAPRADPKEIEDLTVTSRRRLRPSQRLIEYEC--EAVGPSSLAPTGASGGAXXXXXXXXXXXXASSEAGKGPGLGTATRRPLATNIMNAGGGGANLIAASGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSHKRKVPLPPGV 1689
            PV+LGRGRKLCP+C ALTKSAVKQCR C+H+F+P  SR+R A   +PKE +D  V  RRR RPSQRL+E      A GP   AP G  G                       G   + RRPLA    N GGG  N   ASG                                         KRSHKRKVPLPPGV
Sbjct:   93 PVRLGRGRKLCPSCKALTKSAVKQCRLCHHVFNPV-SRMR-AQHREPKENDDAPVLPRRRHRPSQRLLESRVVSAAAGPQEGAPAGGEGAV---------------------GGAASARRPLAA--FN-GGGDTNQRVASGAMAATAVATKKTGAVSASGEQAP------------------KRSHKRKVPLPPGV 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig219.5785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU46_9PHAE6.800e-2533.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSG9_ECTSI4.730e-1941.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig219contigH-paniculata_contig219:36521..43546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-21_003640.1
Exons6
Model size3693
Cds size2913
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig219.5785.1prot_H-paniculata_contig219.5785.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig219 37527..42937 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929597.3692968-UTR-H-paniculata_contig219:36520..365841622929597.3692968-UTR-H-paniculata_contig219:36520..36584Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig219 36521..36584 +
1691480929.5652483-UTR-H-paniculata_contig219:36520..365841691480929.5652483-UTR-H-paniculata_contig219:36520..36584Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig219 36521..36584 +
1622929597.4583528-UTR-H-paniculata_contig219:37419..375261622929597.4583528-UTR-H-paniculata_contig219:37419..37526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig219 37420..37526 +
1691480929.5783048-UTR-H-paniculata_contig219:37419..375261691480929.5783048-UTR-H-paniculata_contig219:37419..37526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig219 37420..37526 +
1622929597.5941112-UTR-H-paniculata_contig219:42937..435461622929597.5941112-UTR-H-paniculata_contig219:42937..43546Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig219 42938..43546 +
1691480929.6355963-UTR-H-paniculata_contig219:42937..435461691480929.6355963-UTR-H-paniculata_contig219:42937..43546Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig219 42938..43546 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929597.525376-CDS-H-paniculata_contig219:37526..375281622929597.525376-CDS-H-paniculata_contig219:37526..37528Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 37527..37528 +
1691480929.5916088-CDS-H-paniculata_contig219:37526..375281691480929.5916088-CDS-H-paniculata_contig219:37526..37528Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 37527..37528 +
1622929597.545044-CDS-H-paniculata_contig219:38030..381001622929597.545044-CDS-H-paniculata_contig219:38030..38100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 38031..38100 +
1691480929.6022139-CDS-H-paniculata_contig219:38030..381001691480929.6022139-CDS-H-paniculata_contig219:38030..38100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 38031..38100 +
1622929597.560317-CDS-H-paniculata_contig219:38636..400611622929597.560317-CDS-H-paniculata_contig219:38636..40061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 38637..40061 +
1691480929.6106224-CDS-H-paniculata_contig219:38636..400611691480929.6106224-CDS-H-paniculata_contig219:38636..40061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 38637..40061 +
1622929597.571558-CDS-H-paniculata_contig219:40685..414771622929597.571558-CDS-H-paniculata_contig219:40685..41477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 40686..41477 +
1691480929.6189926-CDS-H-paniculata_contig219:40685..414771691480929.6189926-CDS-H-paniculata_contig219:40685..41477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 40686..41477 +
1622929597.5827315-CDS-H-paniculata_contig219:42313..429371622929597.5827315-CDS-H-paniculata_contig219:42313..42937Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 42314..42937 +
1691480929.6273906-CDS-H-paniculata_contig219:42313..429371691480929.6273906-CDS-H-paniculata_contig219:42313..42937Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig219 42314..42937 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig219.5785.1

>prot_H-paniculata_contig219.5785.1 ID=prot_H-paniculata_contig219.5785.1|Name=mRNA_H-paniculata_contig219.5785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=971bp
MTAKNTSSAESFKTVKQALQQQQKSHPKTTPDQPHDRRETKMAKQQASDT
AHHNPTLTGREQMPLWMDGVPETGRERRDRAIGDAAESSTGVARAEEPEL
SAELSEVRSRHSSSPVKVEPDPEEARHPSAVVATAGGSRETNGNMATEEE
EANITVGPSVDTKISNKDSSNRSGSRGGSGGAAIPVSPPSSPAYVATQHM
PVPEAMKEARGAGAETVGAEEAKEDVSVLLVSNVTKAEVESSSGVGKPVA
PTKPIGVPATAIPPSAGVPSPAAATTVNTVVAATDAGSTGDSSKQTQASA
IAAPDTTTRPPPPVKLGRGRKLCPNCHALTKSAVKQCRECNHIFSPACSR
LRPAPRADPKEIEDLTVTSRRRLRPSQRLIEYECEAVGPSSLAPTGASGG
APGAVVATVATVAASSEAGKGPGLGTATRRPLATNIMNAGGGGANLIAAS
GVGGGGKPAAAGGAGGMTKKSLAAGTGGSGAKSAGDGAAAPPKRSHKRKV
PLPPGVAPPKRKKGAAAAAAAAAAATAAAGRPVPSPPTNGPDRTLIARNL
LAQAEPKLGPAIVPTGGPSPSAVAPGPLLFLPSASTPDDHDAWPAQSSYL
PSGHDQQQLRQQGLVTPPGSAEDSAASVVCPSNAAGAAASWRSPTAAAAD
EGDDLSASFSLVPQQRGGSGGGDVIDLLAASQDKDPFEGVELWLGDERRL
REQQQGYGGGGGGGAGYVPAVSLSLSPVTGGLSAFPVAVTGGSVGGGGGG
GGGYVAGGGPIEQRALSLEESMELLGDGDLMWSPSRTTSAESSSNASTNS
TNSLWQDVTSTATGINYSLVVSRGSPAPEFDRVAALASTSTADLLPRASS
NAGGVSCLGRSTSLDLHGLLGYGSSSPSSSLEPLAFGTAAGMSLEGGGFK
ESAMDVAADSSMTIGGDWGGSSAAWAVVNRGCPYSNSRVGEGGGGNAAQH
QEAFVGGTPSSFPGPSVVGM*
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mRNA from alignment at H-paniculata_contig219:36521..43546+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig219.5785.1 ID=mRNA_H-paniculata_contig219.5785.1|Name=mRNA_H-paniculata_contig219.5785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7026bp|location=Sequence derived from alignment at H-paniculata_contig219:36521..43546+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAGCCAAGCTACACATACGATACATACCTTGACAAACCAACAAGGGAGA
GACCAAGAGAGTAGGTAAGCTTCGTGTACCAGGTCGGGAGCGTGGTGCTG
CGTGCGATCCTCGTTTGCTCAAGCGTCTAGGCCTTTTCTACCTAGGGAAT
TAACTAGTGTGGTGTAGATGTCACAATCCGTCACTTTCAGTTTTTTTGAC
CTTGAGCAAAACACCCGCAAGACTCACGACCCCAGTCGTGCATGAGGCAA
GCACAGCTAGAGGCGACTGTAAGCTTGCTCAGGATTATCTTTTGCTGGCT
TCTCGAGGACGGACGGATCCTGGCAATTTTTGATTCGTGGGTGCTGTTGT
TGTATTTGGGGTGCATGCATTGAACCACCAATTGGGGCAGGGTTCAAAAC
CTCACCTGTCTGTTGCGCGCGTCCTCTCGGGGTCATCAATACTCGGCGGG
AAACGATAAAAGCAATCGCCCGACAGCGGGGTAGGTAGAGGAGTACAGAT
ATACACACGCCAAATGTGGCATAGAAAGGGCCACCCTAAGCCGCAGGGTG
TCTTGAAGCCTGTGCGTATTGATCTAGGGTACTGTTTTCATTTGATCTGC
TTGCGGCAGCAGGAGGAAGAGGAGGAAGAGAACATGCCGTCTTCCCTCTT
TGAAAAACTGGTAAAAAAATAAGAATCGAATGATGCAAGACCATAGAGCG
ACCGACCATTGATAATCCAAACGCACGGCACCGGCCCACCATCGCAGCCG
CCCTCCAGACGTAATCATTACGATTGCAGCATCCTTATAGCTCCCCCCCA
CCCCTCCCACCCCTACCATTTATCTTGGGCCTCCGACGATCTTTCCCCAT
CAATTGTTGGGACCCACCCGGCTGTGGTTTTGTCGCGCTTTTCGTTCAGA
GCACGGACAGACTCGAACAGACGGAAGGGAGTTTTCACTCTAATAGAGTA
TCAAAGCGTCATCACAGATCGAGAGATACAGCTTCGGCTCGCCAAGTGGC
TGAAGGATGTGAGGGCTGCTTTCTAGAACGAAAGAGATATGGGGGGCGGG
CGGGCGGGCGGGCAGGTTTGGGCTGTGGAGGACGTAGATTATCAGGATTA
TACCTTCATTGGGATAGCTCAAGCTCTCAGAGTTCGGGCGGTACAATTTC
GGGGCGGGGGGGGGGGCATCATGCCGCTGCGGGGCCGGGCGGGCATTTTG
GGACGGTGTGTCCCGTCTGCATCGGAGATGTACTTCGGTTTTCTCCTTTG
AAATGCTATCCAAATCCATGCTATGCAAATCCGTGCTGGTGCCTTACGCT
ATACCTTGCGATCAAACCAGCTTTTACATATGTTGAGGGGTGTGCTGTGC
TGTTGGTAAGACTTTGTGTAGGCCCTTTTTATCTGTTTCAAACTGCACTT
GTTTTCCTTTCTTGCAGCAACTAACTTTGGTCCTGCCCCTTGTGCACCCG
CCCCCTTGTCAAAATGTTTACGTCTGTGGTCATTCCGCCGTCGACCAAAA
CAAATTGCAGGACAGCCAAAAACACGAGTTCCGCAGAATCGTTCAAGACC
GTCAAGCAGGCTCTTCAACAACAGCAAAAGGTGAGAGTTGTAGCCATCAG
AAGGAAAGCAGAATCTCGTGTGATGAAAGAGAACAAACCTATTGTTGTGT
GTTCAGTATGTAGTTGGTTGTTGGGGTGAACTCACCTCAAGCAGCAGAGT
GACATCTATCTCACTTTCTGCATGACCATTTTTTTATTCGATCGAGCCGT
CTTGACTCTACACACTGTACTGTAGTTCTGTTTCCAGTGTCGCATTCTTC
AACCTTCAACGACGACACGGTCATGATATGCTCTCTCAGTCTAGTAAGAC
GAGTTCAACGTGGTCGTCGTCGTTCTGATGTGACCGTCCGTATGAGTAGA
GAAGAGGAGACACCTTCTTTCTGACTTTGAACTTGATTTCTTCCCTCCCG
TCTGGGGGTCGAAGGTACCGTCTGTAACAGCTGGAAAGTGACCACGCGGA
CAGATCATGAGAAACGGCAGCCTTTTTCTTGACGTGGAAATTCGTTATCT
GCCTGCCCGCTGTGTGCTGCTGCTGCCCCGTCCCACGGGCGCCCTTGTTT
TTTAACCAATTCTCAGTCACACCCAAAAACAACCCCTGATCAGCCTCACG
ACCGAAGAGAAACAAAGATGGCGAAGCAGCAGGCGTCAGACACAGCACAC
CATAACCCCACTTTGACCGGTCGGGAACAGATGCCCCTATGGATGGACGG
AGTGCCGGAGACAGGCAGGGAACGGCGAGACAGAGCAATAGGGGACGCTG
CGGAATCTTCTACCGGGGTAGCCAGGGCAGAGGAGCCGGAGTTGTCAGCA
GAATTATCAGAAGTGCGAAGCAGGCATAGCTCTAGTCCAGTGAAGGTGGA
GCCCGACCCGGAGGAGGCTCGACATCCTTCTGCCGTCGTTGCCACCGCAG
GTGGCAGTCGTGAAACCAACGGTAATATGGCCACAGAAGAGGAGGAAGCT
AATATTACCGTTGGACCATCTGTGGACACCAAAATCAGCAACAAGGACAG
TAGTAACCGAAGTGGATCTCGAGGCGGAAGCGGCGGCGCTGCCATCCCTG
TTTCCCCGCCATCTTCCCCGGCCTATGTTGCGACGCAACACATGCCGGTA
CCAGAGGCGATGAAGGAAGCAAGAGGGGCCGGAGCTGAGACCGTGGGCGC
TGAGGAGGCGAAGGAGGATGTGTCTGTACTGCTTGTCTCTAACGTAACCA
AGGCCGAGGTCGAATCTTCGTCGGGCGTCGGAAAACCTGTCGCACCGACG
AAGCCGATAGGGGTCCCAGCAACGGCGATACCACCATCGGCAGGGGTGCC
GTCACCAGCAGCGGCGACAACGGTTAATACCGTAGTTGCAGCGACGGACG
CCGGGTCAACAGGGGACAGTTCTAAACAGACACAGGCATCCGCCATTGCC
GCCCCTGACACTACGACGAGGCCACCGCCGCCCGTCAAGCTCGGACGCGG
TCGAAAGCTCTGCCCAAACTGTCATGCCCTCACCAAGTCAGCCGTGAAGC
AGTGCCGAGAGTGCAATCACATTTTCAGCCCGGCGTGTTCCAGGCTGCGC
CCGGCCCCACGCGCAGACCCCAAGGAAATCGAGGACCTCACCGTTACCTC
GCGTCGACGGCTCAGGCCATCCCAGCGCCTTATCGAGTATGAGTGCGAAG
CCGTCGGACCATCTTCATTGGCGCCAACGGGCGCCTCGGGTGGGGCACCA
GGGGCGGTGGTGGCGACGGTGGCGACGGTGGCGGCGTCCTCAGAGGCGGG
GAAGGGCCCCGGTTTGGGGACTGCCACTCGACGGCCGCTTGCCACGAACA
TTATGAATGCAGGAGGGGGTGGAGCAAACCTGATTGCGGCCTCCGGCGTG
GGCGGGGGAGGGAAGCCGGCAGCCGCTGGTGGGGCGGGCGGCATGACCAA
GAAGTCACTCGCAGCGGGCACAGGTGGCAGCGGGGCAAAGAGTGCTGGGG
ACGGCGCTGCGGCACCTCCGAAGCGCAGTCACAAGCGAAAGGTACATGGC
ACTAGTTCTTGGATACTATGTCGTCAGTTTTTACTCCTGATTTCTTTGAA
CTATTGGTATATAGATGGTACACAGTTATGCCTGCCTCCATGCGCCACCC
CACTCGACCCTACTCAATGAAGCCCCTTTGTTGCGGATGACGCCGGCGAT
GTTTTGATAGACCTGTAGAGGTTGGTCGGGTTGGGCGCTGATATGATTCT
TTTTCAATCTGGCTGTACCCTATCTGTTTTTTTTTGTGTTGAAAGACATT
ATTTTTTTTCCAAACGTTACATGCTTGCGTTGGGTTGGCACGTGAATTTG
CCCTGAAACGGGACATTTCTCGCGGCAAAATGCGAGGGTGAGAATTTCAA
TCGCTCGTGTCAACACGGCATGTCTCATTGCTACTGGTCCAATCAATACG
CTTGGCTCTAAATACCACAACGTCCATTCTCTTATGGACACAAATTCTAC
GTTCCATTCATCACACGCTTCAACGAACTGCAGTAAAGCTTTCACACGTA
TCCTGACAACAATCAAACTCTCACGTACCCTCCGTGCCCGTCCTCTCTGT
CTTTTGACGTATTACCCTCCCCAACGTGAATGATCCCTCTTGTGCTTGCT
TCTCTCGTACGTTAGGTTCCCCTTCCGCCTGGCGTAGCACCGCCAAAGCG
CAAGAAGGGCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCCACGGCCG
CTGCCGGCCGACCGGTACCATCACCACCGACAAATGGACCAGACCGGACG
TTAATCGCGCGAAATCTGCTCGCGCAGGCTGAACCGAAGCTTGGCCCGGC
AATCGTTCCGACGGGCGGTCCTTCGCCGTCTGCCGTTGCCCCAGGTCCTC
TGTTGTTTTTGCCGTCTGCATCGACTCCGGATGATCACGACGCTTGGCCG
GCGCAATCTTCGTACCTGCCGTCGGGACACGACCAGCAGCAGTTGCGACA
GCAGGGGTTGGTTACGCCACCGGGGTCAGCGGAGGACTCAGCGGCGTCTG
TCGTTTGTCCTTCCAATGCGGCGGGGGCGGCGGCTTCTTGGCGCAGCCCC
ACCGCCGCTGCCGCTGATGAGGGTGATGACTTGTCGGCATCGTTTTCTTT
GGTACCGCAGCAACGCGGCGGCAGTGGCGGCGGCGACGTGATCGATTTGT
TGGCTGCCAGCCAGGACAAAGACCCCTTTGAGGGCGTTGAGCTTTGGCTG
GGGGACGAGCGGCGACTGCGGGAACAACAGCAAGGGTACGGTGGAGGCGG
CGGCGGTGGTGCCGGATATGTGCCGGCTGTTTCTCTTAGCTTGTCTCCTG
TGACTGGAGGGCTATCAGCTTTTCCTGTTGCAGTCACTGGTGGGAGCGTA
GGAGGAGGAGGAGGGGGAGGTGGAGGCTATGTGGCAGGAGGCGGGCCTAT
TGAGCAGGTAAAGGATGATGCCTACATAATAATCGAGGAAATAACTATTG
TTGTAGGGCGTTGAGAGAGAGGGAGGAGAAGCGTGGGCTGTTGCAGATTG
GACCAAGAGCCGGGGTTAGAGGGAGTAGTTTGTCTCTGTGGGGTCAATTA
ATCAACTTTTGGTTATCGCCCGTTTTTATTTAGTTTCTTGTGCTTCGATT
GCGTTGCATAGAGTGTGGTTGTGGATTTCCCTCTCTACTTATACACGCGT
AGCCCGCTATGTACCATCGAAAATCTGTACATTTGACGCGTGACGCTCTT
TTATTTCAAAATATCCAAATCGTGCGGGTATTTAATGAAAAAAATAGGAA
GCATGTAAGGGCAAGCCGTAATCCACAAAAACAGAGCACGAGTACGAAAA
TGAGCAGGGATCTCACATCGCCCGTCTTGTCAAAGCAGGGACGATACCCA
GGCACCTGAGTAAAACTCTGCCGAGGACACTTGTCTGTGTATGATATTTA
TAACTTTTACTGCACAGCGCTCGGCGTAATTAATTGTACTGTCATTGGCG
AAATAGTTTTTCCTTCGCCAAAATCTCGTCTCCTGTCCAATTCCCCCTCG
ATGGATCGTTCTTGGCTAATTTGTATGGCTAGCTCTCTGAAGAACTTTTT
CCCTCCCCTCTTTATGCCGCTTCTACAAGAATAATGCTGGTATCTAGGTT
ATCATGCTTGTTAATTAATTTTGCCGACAATATCACGTCCTGTGCCTAAC
CTTACACCGACTGCCCCCCCCCCCTCGTTCCCATCTTTCGTGGCTTGATG
CTTCTGGTTTTTCGTTTCTTTGTTTAAAATTTAAACCCCATAGCGTGCGC
TGTCATTGGAAGAAAGCATGGAACTCCTGGGCGACGGAGATCTAATGTGG
AGTCCTTCGAGAACAACTTCCGCCGAGTCCAGTTCCAACGCGAGCACCAA
TAGCACCAACAGTCTGTGGCAAGACGTTACCAGTACCGCCACCGGCATCA
ACTACTCACTGGTCGTATCCCGCGGCAGCCCCGCGCCGGAGTTCGATCGA
GTCGCGGCGCTTGCGTCCACCTCCACCGCCGACTTGCTCCCTCGCGCCTC
TAGCAACGCTGGCGGCGTCAGCTGCCTTGGCCGCAGCACCAGCTTGGATT
TGCACGGGTTGTTGGGCTACGGGAGCTCGAGCCCCTCGTCGAGTCTAGAG
CCGCTGGCGTTTGGTACCGCTGCGGGAATGTCCTTAGAAGGAGGCGGGTT
TAAGGAAAGTGCTATGGATGTTGCGGCAGACAGTAGCATGACGATCGGCG
GTGATTGGGGGGGGTCATCGGCCGCATGGGCCGTAGTCAACAGGGGGTGC
CCGTATAGCAATAGTCGGGTTGGGGAGGGGGGGGGTGGTAACGCTGCTCA
GCACCAGGAGGCGTTTGTCGGCGGTACCCCTTCGTCCTTCCCTGGTCCTT
CGGTCGTGGGAATGTGATATTTTGGGGGGTCGGCCTGATCCGGACTTGGC
CACGACCGTGCGTGAAGCGGTCCGCATCCGTACGGGGAGACTTTTCCTGA
AACCTGTTCAGCAGCCCCTTGTAGGGAGTATAAAGCAAGATAAGGAGGAC
ATGCGGAGGTTCGCAAGAAGGCTCGGGAAGGAAGGGAGCTGGGGAGTGGT
AGAAATGGAGCAATGACCTTCAAGTGTTGCTGAAGTTTGATGTTTTTTCG
ACGACACTGGGCGGAGCCACTGCTGTGTGTTTCGATTGTAGTGTGCTCTG
GAAGTCGGCCGAGGGAAAGTGTGAGGGACGGGGTTGTATATGAAGGAAGG
AGGAGGGGAGGGAAGGAAAGGAAGTTTGTGCTTGGAAGGCAGGCGATGGA
GGAAGACTGGTAGTTTATTACGAAGTCAGCTTGTTTGGTGATCTGCCCAA
CCATGTCAAGACTTCGATGTTCATTTATACAAGAAAAGGCCGCTAGCACT
ATTTGCTGTGCAGCGGAAAACAGGATGAGGGCGTGATGGCACATAAAAAC
CAAACTCGCACAAACAACGTGAATGTGGTGGCAATGGCGGCCGGCTGGCT
CGCTGGCTGGTGGGGAGCAATGGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig219:36521..43546+

>mRNA_H-paniculata_contig219.5785.1 ID=mRNA_H-paniculata_contig219.5785.1|Name=mRNA_H-paniculata_contig219.5785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5826bp|location=Sequence derived from alignment at H-paniculata_contig219:36521..43546+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATGACAGCCAAAAACACGAGTTCCGCAGAATCGTTCAAGACCGTCAAG
CAGGCTCTTCAACAACAGCAAAAGGACAGCCAAAAACACGAGTTCCGCAG
AATCGTTCAAGACCGTCAAGCAGGCTCTTCAACAACAGCAAAAGTCACAC
CCAAAAACAACCCCTGATCAGCCTCACGACCGAAGAGAAACAAAGATGGC
GAAGCAGCAGGCGTCAGACACAGCACACCATAACCCCACTTTGACCGGTC
GGGAACAGATGCCCCTATGGATGGACGGAGTGCCGGAGACAGGCAGGGAA
CGGCGAGACAGAGCAATAGGGGACGCTGCGGAATCTTCTACCGGGGTAGC
CAGGGCAGAGGAGCCGGAGTTGTCAGCAGAATTATCAGAAGTGCGAAGCA
GGCATAGCTCTAGTCCAGTGAAGGTGGAGCCCGACCCGGAGGAGGCTCGA
CATCCTTCTGCCGTCGTTGCCACCGCAGGTGGCAGTCGTGAAACCAACGG
TAATATGGCCACAGAAGAGGAGGAAGCTAATATTACCGTTGGACCATCTG
TGGACACCAAAATCAGCAACAAGGACAGTAGTAACCGAAGTGGATCTCGA
GGCGGAAGCGGCGGCGCTGCCATCCCTGTTTCCCCGCCATCTTCCCCGGC
CTATGTTGCGACGCAACACATGCCGGTACCAGAGGCGATGAAGGAAGCAA
GAGGGGCCGGAGCTGAGACCGTGGGCGCTGAGGAGGCGAAGGAGGATGTG
TCTGTACTGCTTGTCTCTAACGTAACCAAGGCCGAGGTCGAATCTTCGTC
GGGCGTCGGAAAACCTGTCGCACCGACGAAGCCGATAGGGGTCCCAGCAA
CGGCGATACCACCATCGGCAGGGGTGCCGTCACCAGCAGCGGCGACAACG
GTTAATACCGTAGTTGCAGCGACGGACGCCGGGTCAACAGGGGACAGTTC
TAAACAGACACAGGCATCCGCCATTGCCGCCCCTGACACTACGACGAGGC
CACCGCCGCCCGTCAAGCTCGGACGCGGTCGAAAGCTCTGCCCAAACTGT
CATGCCCTCACCAAGTCAGCCGTGAAGCAGTGCCGAGAGTGCAATCACAT
TTTCAGCCCGGCGTGTTCCAGGCTGCGCCCGGCCCCACGCGCAGACCCCA
AGGAAATCGAGGACCTCACCGTTACCTCGCGTCGACGGCTCAGGCCATCC
CAGCGCCTTATCGAGTATGAGTGCGAAGCCGTCGGACCATCTTCATTGGC
GCCAACGGGCGCCTCGGGTGGGGCACCAGGGGCGGTGGTGGCGACGGTGG
CGACGGTGGCGGCGTCCTCAGAGGCGGGGAAGGGCCCCGGTTTGGGGACT
GCCACTCGACGGCCGCTTGCCACGAACATTATGAATGCAGGAGGGGGTGG
AGCAAACCTGATTGCGGCCTCCGGCGTGGGCGGGGGAGGGAAGCCGGCAG
CCGCTGGTGGGGCGGGCGGCATGACCAAGAAGTCACTCGCAGCGGGCACA
GGTGGCAGCGGGGCAAAGAGTGCTGGGGACGGCGCTGCGGCACCTCCGAA
GCGCAGTCACAAGCGAAAGTCACACCCAAAAACAACCCCTGATCAGCCTC
ACGACCGAAGAGAAACAAAGATGGCGAAGCAGCAGGCGTCAGACACAGCA
CACCATAACCCCACTTTGACCGGTCGGGAACAGATGCCCCTATGGATGGA
CGGAGTGCCGGAGACAGGCAGGGAACGGCGAGACAGAGCAATAGGGGACG
CTGCGGAATCTTCTACCGGGGTAGCCAGGGCAGAGGAGCCGGAGTTGTCA
GCAGAATTATCAGAAGTGCGAAGCAGGCATAGCTCTAGTCCAGTGAAGGT
GGAGCCCGACCCGGAGGAGGCTCGACATCCTTCTGCCGTCGTTGCCACCG
CAGGTGGCAGTCGTGAAACCAACGGTAATATGGCCACAGAAGAGGAGGAA
GCTAATATTACCGTTGGACCATCTGTGGACACCAAAATCAGCAACAAGGA
CAGTAGTAACCGAAGTGGATCTCGAGGCGGAAGCGGCGGCGCTGCCATCC
CTGTTTCCCCGCCATCTTCCCCGGCCTATGTTGCGACGCAACACATGCCG
GTACCAGAGGCGATGAAGGAAGCAAGAGGGGCCGGAGCTGAGACCGTGGG
CGCTGAGGAGGCGAAGGAGGATGTGTCTGTACTGCTTGTCTCTAACGTAA
CCAAGGCCGAGGTCGAATCTTCGTCGGGCGTCGGAAAACCTGTCGCACCG
ACGAAGCCGATAGGGGTCCCAGCAACGGCGATACCACCATCGGCAGGGGT
GCCGTCACCAGCAGCGGCGACAACGGTTAATACCGTAGTTGCAGCGACGG
ACGCCGGGTCAACAGGGGACAGTTCTAAACAGACACAGGCATCCGCCATT
GCCGCCCCTGACACTACGACGAGGCCACCGCCGCCCGTCAAGCTCGGACG
CGGTCGAAAGCTCTGCCCAAACTGTCATGCCCTCACCAAGTCAGCCGTGA
AGCAGTGCCGAGAGTGCAATCACATTTTCAGCCCGGCGTGTTCCAGGCTG
CGCCCGGCCCCACGCGCAGACCCCAAGGAAATCGAGGACCTCACCGTTAC
CTCGCGTCGACGGCTCAGGCCATCCCAGCGCCTTATCGAGTATGAGTGCG
AAGCCGTCGGACCATCTTCATTGGCGCCAACGGGCGCCTCGGGTGGGGCA
CCAGGGGCGGTGGTGGCGACGGTGGCGACGGTGGCGGCGTCCTCAGAGGC
GGGGAAGGGCCCCGGTTTGGGGACTGCCACTCGACGGCCGCTTGCCACGA
ACATTATGAATGCAGGAGGGGGTGGAGCAAACCTGATTGCGGCCTCCGGC
GTGGGCGGGGGAGGGAAGCCGGCAGCCGCTGGTGGGGCGGGCGGCATGAC
CAAGAAGTCACTCGCAGCGGGCACAGGTGGCAGCGGGGCAAAGAGTGCTG
GGGACGGCGCTGCGGCACCTCCGAAGCGCAGTCACAAGCGAAAGGTTCCC
CTTCCGCCTGGCGTAGCACCGCCAAAGCGCAAGAAGGGCGCCGCCGCCGC
CGCCGCAGCAGCAGCAGCAGCCACGGCCGCTGCCGGCCGACCGGTACCAT
CACCACCGACAAATGGACCAGACCGGACGTTAATCGCGCGAAATCTGCTC
GCGCAGGCTGAACCGAAGCTTGGCCCGGCAATCGTTCCGACGGGCGGTCC
TTCGCCGTCTGCCGTTGCCCCAGGTCCTCTGTTGTTTTTGCCGTCTGCAT
CGACTCCGGATGATCACGACGCTTGGCCGGCGCAATCTTCGTACCTGCCG
TCGGGACACGACCAGCAGCAGTTGCGACAGCAGGGGTTGGTTACGCCACC
GGGGTCAGCGGAGGACTCAGCGGCGTCTGTCGTTTGTCCTTCCAATGCGG
CGGGGGCGGCGGCTTCTTGGCGCAGCCCCACCGCCGCTGCCGCTGATGAG
GGTGATGACTTGTCGGCATCGTTTTCTTTGGTACCGCAGCAACGCGGCGG
CAGTGGCGGCGGCGACGTGATCGATTTGTTGGCTGCCAGCCAGGACAAAG
ACCCCTTTGAGGGCGTTGAGCTTTGGCTGGGGGACGAGCGGCGACTGCGG
GAACAACAGCAAGGGTACGGTGGAGGCGGCGGCGGTGGTGCCGGATATGT
GCCGGCTGTTTCTCTTAGCTTGTCTCCTGTGACTGGAGGGCTATCAGCTT
TTCCTGTTGCAGTCACTGGTGGGAGCGTAGGAGGAGGAGGAGGGGGAGGT
GGAGGCTATGTGGCAGGAGGCGGGCCTATTGAGCAGGTTCCCCTTCCGCC
TGGCGTAGCACCGCCAAAGCGCAAGAAGGGCGCCGCCGCCGCCGCCGCAG
CAGCAGCAGCAGCCACGGCCGCTGCCGGCCGACCGGTACCATCACCACCG
ACAAATGGACCAGACCGGACGTTAATCGCGCGAAATCTGCTCGCGCAGGC
TGAACCGAAGCTTGGCCCGGCAATCGTTCCGACGGGCGGTCCTTCGCCGT
CTGCCGTTGCCCCAGGTCCTCTGTTGTTTTTGCCGTCTGCATCGACTCCG
GATGATCACGACGCTTGGCCGGCGCAATCTTCGTACCTGCCGTCGGGACA
CGACCAGCAGCAGTTGCGACAGCAGGGGTTGGTTACGCCACCGGGGTCAG
CGGAGGACTCAGCGGCGTCTGTCGTTTGTCCTTCCAATGCGGCGGGGGCG
GCGGCTTCTTGGCGCAGCCCCACCGCCGCTGCCGCTGATGAGGGTGATGA
CTTGTCGGCATCGTTTTCTTTGGTACCGCAGCAACGCGGCGGCAGTGGCG
GCGGCGACGTGATCGATTTGTTGGCTGCCAGCCAGGACAAAGACCCCTTT
GAGGGCGTTGAGCTTTGGCTGGGGGACGAGCGGCGACTGCGGGAACAACA
GCAAGGGTACGGTGGAGGCGGCGGCGGTGGTGCCGGATATGTGCCGGCTG
TTTCTCTTAGCTTGTCTCCTGTGACTGGAGGGCTATCAGCTTTTCCTGTT
GCAGTCACTGGTGGGAGCGTAGGAGGAGGAGGAGGGGGAGGTGGAGGCTA
TGTGGCAGGAGGCGGGCCTATTGAGCAGCGTGCGCTGTCATTGGAAGAAA
GCATGGAACTCCTGGGCGACGGAGATCTAATGTGGAGTCCTTCGAGAACA
ACTTCCGCCGAGTCCAGTTCCAACGCGAGCACCAATAGCACCAACAGTCT
GTGGCAAGACGTTACCAGTACCGCCACCGGCATCAACTACTCACTGGTCG
TATCCCGCGGCAGCCCCGCGCCGGAGTTCGATCGAGTCGCGGCGCTTGCG
TCCACCTCCACCGCCGACTTGCTCCCTCGCGCCTCTAGCAACGCTGGCGG
CGTCAGCTGCCTTGGCCGCAGCACCAGCTTGGATTTGCACGGGTTGTTGG
GCTACGGGAGCTCGAGCCCCTCGTCGAGTCTAGAGCCGCTGGCGTTTGGT
ACCGCTGCGGGAATGTCCTTAGAAGGAGGCGGGTTTAAGGAAAGTGCTAT
GGATGTTGCGGCAGACAGTAGCATGACGATCGGCGGTGATTGGGGGGGGT
CATCGGCCGCATGGGCCGTAGTCAACAGGGGGTGCCCGTATAGCAATAGT
CGGGTTGGGGAGGGGGGGGGTGGTAACGCTGCTCAGCACCAGGAGGCGTT
TGTCGGCGGTACCCCTTCGTCCTTCCCTGGTCCTTCGGTCGTGGGAATGT
GACGTGCGCTGTCATTGGAAGAAAGCATGGAACTCCTGGGCGACGGAGAT
CTAATGTGGAGTCCTTCGAGAACAACTTCCGCCGAGTCCAGTTCCAACGC
GAGCACCAATAGCACCAACAGTCTGTGGCAAGACGTTACCAGTACCGCCA
CCGGCATCAACTACTCACTGGTCGTATCCCGCGGCAGCCCCGCGCCGGAG
TTCGATCGAGTCGCGGCGCTTGCGTCCACCTCCACCGCCGACTTGCTCCC
TCGCGCCTCTAGCAACGCTGGCGGCGTCAGCTGCCTTGGCCGCAGCACCA
GCTTGGATTTGCACGGGTTGTTGGGCTACGGGAGCTCGAGCCCCTCGTCG
AGTCTAGAGCCGCTGGCGTTTGGTACCGCTGCGGGAATGTCCTTAGAAGG
AGGCGGGTTTAAGGAAAGTGCTATGGATGTTGCGGCAGACAGTAGCATGA
CGATCGGCGGTGATTGGGGGGGGTCATCGGCCGCATGGGCCGTAGTCAAC
AGGGGGTGCCCGTATAGCAATAGTCGGGTTGGGGAGGGGGGGGGTGGTAA
CGCTGCTCAGCACCAGGAGGCGTTTGTCGGCGGTACCCCTTCGTCCTTCC
CTGGTCCTTCGGTCGTGGGAATGTGA
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