prot_H-paniculata_contig219.5785.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig219.5785.1
Unique Nameprot_H-paniculata_contig219.5785.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length971
Homology
BLAST of mRNA_H-paniculata_contig219.5785.1 vs. uniprot
Match: A0A6H5KU46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU46_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.350e-25
Identity = 215/649 (33.13%), Postives = 270/649 (41.60%), Query Frame = 0
Query:  184 IPVSPPSSPAYVATQHMPVPEAMKEARGAGAETVGAEEAKEDVSVLLVSNVTKAEVESSSGVGKPVAPTKPIGVPATAIPPSAGVPSPAAATTVNTVVAATDAGSTGDSSKQTQASAIAAXXXXXXXXXPVKLGRGRKLCPNCHALTKSAVKQCRECNHIFSPACSRLRPAPRADPKEIEDLTVTSRRRLRPSQRLIEYEC--EAVGPSSLAPTGASGGAXXXXXXXXXXXXASSEAGKGPGLGTATRRPLATNIMNAGGGGANLIAASGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSHKRKVPLPPGVAXXXXXXXXXXXXXXXXXXXXXAGR---PVPSPPTNGP----------DRTLIARNLLAQAEPKL-----GPAIVPTGGPSPSAVAPGPLLFLPSASTPDDHDAWPAQSSYLPSGHDQQQLRQQGLVTPPGSA-----------EDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLSASFSLVPQQRGXSGGGDV-IDLLAASQDKDPFEGVEL-WLGDERRLREQQXXXXXXXXXXXGYVPAVSLSLSPVTGGLSAFPVAVTGGSVGXXXXXXXXXXXGGGPIEQR--ALSLEESMELLGDGD--LMWSPSRTTSAESSSN 795
            IP+SPPSSP +VA   +P                 A EA+E V+ ++     K E  +     +           A   PP+ G+P+ A A  V   V          SS    A+A+           PV+LGRGRKLCP+C ALTKSAVKQCR C+H+F+P  SR+R A   +PKE ED  V  RRR RPSQRL+E      A GP   APTG                          G   + RRPLA  +   GGG  N   ASG                                         KRSHKRKVPLPPGV  XXXXXXXXXXXXXXXXXXXX      P  +    GP          +R  +A +L+A   P        P + PT  P+      GPLLF+  A  P    A P+ +S      D + L   G++  P +A              X X                         ++  A  +L P +R  SGGG++ +DL A  QD+DPF GVE+ WL +        XXXXXXXXXXX   P V             FP+    G+                 +EQ        +S ELLGD D  LMW+P RT S  + +N
Sbjct:  108 IPISPPSSPTHVAPTRLPA----------------AAEAQEVVAAVV--EAPKPETAAXXXXXQ-----------ALPSPPAPGLPASAVAEGVGGPV----------SSSGPPAAAV-----------PVRLGRGRKLCPSCKALTKSAVKQCRLCHHVFNPV-SRMR-AQHREPKENEDAPVLPRRRHRPSQRLLESRVVSAAAGPQEAAPTGGEAAV---------------------GRAASGRRPLAAFM---GGGDTNQRVASGAMAATPVATNKTGAVSASGEQAP------------------KRSHKRKVPLPPGVVPXXXXXXXXXXXXXXXXXXXXXXXXXAPAAASEVTGPHGILPRLSLPERQRVAEDLVASPAPSHVLVPESPELAPTATPA------GPLLFI--APPP----ASPSSNSPSSLEDDPEWLPHSGVIVSPAAAFVQQHQERXXXXXXXWXNQQNQLYLAGAATSLTGLLLGDNQEEEEEAELAL-PVRRHESGGGEIDLDLSADCQDRDPFAGVEITWLENGXXXXXXXXXXXXXXXXXXXXAPTV-------------FPLVSRDGTT----------------MEQHRSVFPSAQSTELLGDADDALMWNPLRTPSVGADAN 620          
BLAST of mRNA_H-paniculata_contig219.5785.1 vs. uniprot
Match: D8LSG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.260e-19
Identity = 81/196 (41.33%), Postives = 91/196 (46.43%), Query Frame = 0
Query:  313 PVKLGRGRKLCPNCHALTKSAVKQCRECNHIFSPACSRLRPAPRADPKEIEDLTVTSRRRLRPSQRLIEYEC--EAVGPSSLAPTGASGGAXXXXXXXXXXXXASSEAGKGPGLGTATRRPLATNIMNAGGGGANLIAASGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSHKRKVPLPPGV 506
            PV+LGRGRKLCP+C ALTKSAVKQCR C+H+F+P  SR+R A   +PKE +D  V  RRR RPSQRL+E      A GP   AP G  G                       G   + RRPLA    N GGG  N   ASG                                         KRSHKRKVPLPPGV
Sbjct:   93 PVRLGRGRKLCPSCKALTKSAVKQCRLCHHVFNPV-SRMR-AQHREPKENDDAPVLPRRRHRPSQRLLESRVVSAAAGPQEGAPAGGEGAV---------------------GGAASARRPLAA--FN-GGGDTNQRVASGAMAATAVATKKTGAVSASGEQAP------------------KRSHKRKVPLPPGV 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig219.5785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU46_9PHAE4.350e-2533.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSG9_ECTSI3.260e-1941.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig219contigH-paniculata_contig219:37527..42937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig219.5785.1mRNA_H-paniculata_contig219.5785.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig219 36521..43546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig219.5785.1 ID=prot_H-paniculata_contig219.5785.1|Name=mRNA_H-paniculata_contig219.5785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=971bp
MTAKNTSSAESFKTVKQALQQQQKSHPKTTPDQPHDRRETKMAKQQASDT
AHHNPTLTGREQMPLWMDGVPETGRERRDRAIGDAAESSTGVARAEEPEL
SAELSEVRSRHSSSPVKVEPDPEEARHPSAVVATAGGSRETNGNMATEEE
EANITVGPSVDTKISNKDSSNRSGSRGGSGGAAIPVSPPSSPAYVATQHM
PVPEAMKEARGAGAETVGAEEAKEDVSVLLVSNVTKAEVESSSGVGKPVA
PTKPIGVPATAIPPSAGVPSPAAATTVNTVVAATDAGSTGDSSKQTQASA
IAAPDTTTRPPPPVKLGRGRKLCPNCHALTKSAVKQCRECNHIFSPACSR
LRPAPRADPKEIEDLTVTSRRRLRPSQRLIEYECEAVGPSSLAPTGASGG
APGAVVATVATVAASSEAGKGPGLGTATRRPLATNIMNAGGGGANLIAAS
GVGGGGKPAAAGGAGGMTKKSLAAGTGGSGAKSAGDGAAAPPKRSHKRKV
PLPPGVAPPKRKKGAAAAAAAAAAATAAAGRPVPSPPTNGPDRTLIARNL
LAQAEPKLGPAIVPTGGPSPSAVAPGPLLFLPSASTPDDHDAWPAQSSYL
PSGHDQQQLRQQGLVTPPGSAEDSAASVVCPSNAAGAAASWRSPTAAAAD
EGDDLSASFSLVPQQRGGSGGGDVIDLLAASQDKDPFEGVELWLGDERRL
REQQQGYGGGGGGGAGYVPAVSLSLSPVTGGLSAFPVAVTGGSVGGGGGG
GGGYVAGGGPIEQRALSLEESMELLGDGDLMWSPSRTTSAESSSNASTNS
TNSLWQDVTSTATGINYSLVVSRGSPAPEFDRVAALASTSTADLLPRASS
NAGGVSCLGRSTSLDLHGLLGYGSSSPSSSLEPLAFGTAAGMSLEGGGFK
ESAMDVAADSSMTIGGDWGGSSAAWAVVNRGCPYSNSRVGEGGGGNAAQH
QEAFVGGTPSSFPGPSVVGM*
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