prot_H-paniculata_contig2188.5777.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2188.5777.1
Unique Nameprot_H-paniculata_contig2188.5777.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 2.990e-54
Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDD 87
            MAA+RF++NRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASH+GHSDLL YFA AENNAVGR+RYQLLEKMLQPCGPPPA+DDDD
Sbjct:   35 MAADRFNMNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD 121          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: W7TXH4_9STRA (Splicing factor subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXH4_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.530e-44
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDDD 88
            MAA+RF+INRSW+H+QNKYVGTGH D TK EW TNQHRD+ A+HLGH D L Y A A+N+AVGR+RYQLLEKMLQPCGPPPA  DD+D
Sbjct:    1 MAADRFNINRSWEHLQNKYVGTGHPDLTKHEWLTNQHRDTYATHLGHHDQLAYIAVAQNDAVGRVRYQLLEKMLQPCGPPPAAKDDED 88          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD)

HSP 1 Score: 145 bits (366), Expect = 9.430e-44
Identity = 62/86 (72.09%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 86
            MAA+RF+INR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGH D+L YFA AEN AVGR+++ +LEKMLQPCGPPP ++D+
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 9.430e-44
Identity = 60/85 (70.59%), Postives = 77/85 (90.59%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDD 85
            MAA+RF+INR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+L YFA AEN ++GR+R+ +LEKMLQPCGPPP + D
Sbjct:    1 MAADRFNINRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 145 bits (365), Expect = 1.380e-43
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 0
Query:    2 AANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 86
            AA+RF+INR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGHSD+L YFA AEN ++GR+RY +LEKMLQPCGPPP ++++
Sbjct:    3 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.560e-43
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 0
Query:    2 AANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 86
            AA+RF++NR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGHSD+L +FA AEN A+GR+RY +LEKMLQPCGPPP +++D
Sbjct:   53 AADRFNVNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.840e-43
Identity = 59/86 (68.60%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 86
            MAA+RF+INR W+H+Q KYVGTGH+DT+KFEWA NQHRD++ASH+GH D+L YFA AEN ++GR+RY +LEKM+QPCGPPP +++D
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.970e-43
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 0
Query:    2 AANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 86
            AA+RF+INR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGHSD+L YFA AEN ++GR+RY +LEKMLQPCGPPP ++++
Sbjct:   45 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: F0YCR2_AURAN (Splicing factor subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCR2_AURAN)

HSP 1 Score: 142 bits (359), Expect = 9.790e-43
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPP 81
            MAA+R +INRSWDHIQ KYVGTGHSD TKFEWA+NQHRDSIASHLGH D++ YFA A+ +++GR RY LLEKMLQPCGPPP
Sbjct:    1 MAADRMNINRSWDHIQAKYVGTGHSDMTKFEWASNQHRDSIASHLGHGDIMTYFAVAQGDSIGRTRYALLEKMLQPCGPPP 81          
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: F0W9E9_9STRA (Splicing factor subunit n=2 Tax=Albugo TaxID=65356 RepID=F0W9E9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.490e-42
Identity = 57/86 (66.28%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 86
            MAA+RF++NR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASH+GH+D+L YFA AEN ++ R+RY +LE+MLQPCGPPP ++++
Sbjct:    1 MAADRFNVNRQWEHLQAKYVGTGHADTTKFEWALNQHRDTLASHIGHADMLLYFAVAENESIARVRYNMLERMLQPCGPPPQKEEE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI2.990e-5490.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TXH4_9STRA2.530e-4475.00Splicing factor subunit n=2 Tax=Monodopsidaceae Ta... [more]
K3WSC6_GLOUD9.430e-4472.09Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4... [more]
A0A6G0XHV2_9STRA9.430e-4470.59Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
H3G531_PHYRM1.380e-4371.76Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
A0A662XDD1_9STRA1.560e-4371.76Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A1W0A9Q9_9STRA3.840e-4368.60Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
A0A8J5IQX8_9STRA4.970e-4371.76Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
F0YCR2_AURAN9.790e-4377.78Splicing factor subunit n=1 Tax=Aureococcus anopha... [more]
F0W9E9_9STRA4.490e-4266.28Splicing factor subunit n=2 Tax=Albugo TaxID=65356... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017089Splicing factor 3B, subunit 5PIRSFPIRSF037010SF3B5coord: 1..87
e-value: 1.4E-34
score: 114.5
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PFAMPF07189SF3b10coord: 4..81
e-value: 1.2E-35
score: 121.4
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PANTHERPTHR20978FAMILY NOT NAMEDcoord: 3..84
NoneNo IPR availablePANTHERPTHR20978:SF0SPLICING FACTOR 3B SUBUNIT 5coord: 3..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2188contigH-paniculata_contig2188:4627..10206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2188.5777.1mRNA_H-paniculata_contig2188.5777.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2188 3689..10275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2188.5777.1 ID=prot_H-paniculata_contig2188.5777.1|Name=mRNA_H-paniculata_contig2188.5777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDL
LCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDDDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017089Splicing_factor_3B_subunit_5
IPR009846SF3b5/RDS3-10