mRNA_H-paniculata_contig2188.5777.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2188.5777.1
Unique NamemRNA_H-paniculata_contig2188.5777.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 4.940e-52
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 1 
Query:   64 ATMAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDD 330
            ATMAA+RF++NRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASH+GHSDLL YFA AENNAVGR+RYQLLEKMLQPCGPPPA+DDDD
Sbjct:   33 ATMAADRFNMNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD 121
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: W7TXH4_9STRA (Splicing factor subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXH4_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.210e-41
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 1 
Query:   70 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDDD 333
            MAA+RF+INRSW+H+QNKYVGTGH D TK EW TNQHRD+ A+HLGH D L Y A A+N+AVGR+RYQLLEKMLQPCGPPPA  DD+D
Sbjct:    1 MAADRFNINRSWEHLQNKYVGTGHPDLTKHEWLTNQHRDTYATHLGHHDQLAYIAVAQNDAVGRVRYQLLEKMLQPCGPPPAAKDDED 88
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD)

HSP 1 Score: 148 bits (373), Expect = 2.250e-40
Identity = 62/86 (72.09%), Postives = 77/86 (89.53%), Query Frame = 1 
Query:   70 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 327
            MAA+RF+INR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGH D+L YFA AEN AVGR+++ +LEKMLQPCGPPP ++D+
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.150e-40
Identity = 60/85 (70.59%), Postives = 77/85 (90.59%), Query Frame = 1 
Query:   70 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDD 324
            MAA+RF+INR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+L YFA AEN ++GR+R+ +LEKMLQPCGPPP + D
Sbjct:    1 MAADRFNINRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 147 bits (372), Expect = 3.250e-40
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 1 
Query:   73 AANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 327
            AA+RF+INR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGHSD+L YFA AEN ++GR+RY +LEKMLQPCGPPP ++++
Sbjct:    3 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.890e-40
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 1 
Query:   73 AANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 327
            AA+RF++NR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGHSD+L +FA AEN A+GR+RY +LEKMLQPCGPPP +++D
Sbjct:   53 AADRFNVNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 146 bits (369), Expect = 8.710e-40
Identity = 59/86 (68.60%), Postives = 77/86 (89.53%), Query Frame = 1 
Query:   70 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 327
            MAA+RF+INR W+H+Q KYVGTGH+DT+KFEWA NQHRD++ASH+GH D+L YFA AEN ++GR+RY +LEKM+QPCGPPP +++D
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.180e-39
Identity = 61/85 (71.76%), Postives = 77/85 (90.59%), Query Frame = 1 
Query:   73 AANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDD 327
            AA+RF+INR W+H+Q KYVGTGH+DTTKFEWA NQHRD++ASHLGHSD+L YFA AEN ++GR+RY +LEKMLQPCGPPP ++++
Sbjct:   45 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: A0A835ZDN9_9STRA (Splicing factor subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN9_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.170e-39
Identity = 60/88 (68.18%), Postives = 79/88 (89.77%), Query Frame = 1 
Query:   70 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDDD 333
            MAA+RF+ N+SWDHIQ K+VGTGH DT+KFEWATNQHRD+IAS++GHSD++ Y++ A+N + GR+RY L+EKMLQPCGPPP +DD+D+
Sbjct:    1 MAADRFNFNKSWDHIQAKFVGTGHGDTSKFEWATNQHRDTIASNVGHSDIIDYYSVAQNLSQGRVRYNLMEKMLQPCGPPPPKDDEDE 88
[Close]
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Match: F0YCR2_AURAN (Splicing factor subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCR2_AURAN)

HSP 1 Score: 144 bits (363), Expect = 5.890e-39
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 1 
Query:   70 MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDLLCYFATAENNAVGRMRYQLLEKMLQPCGPPP 312
            MAA+R +INRSWDHIQ KYVGTGHSD TKFEWA+NQHRDSIASHLGH D++ YFA A+ +++GR RY LLEKMLQPCGPPP
Sbjct:    1 MAADRMNINRSWDHIQAKYVGTGHSDMTKFEWASNQHRDSIASHLGHGDIMTYFAVAQGDSIGRTRYALLEKMLQPCGPPP 81
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2188.5777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI4.940e-5291.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TXH4_9STRA3.210e-4175.00Splicing factor subunit n=2 Tax=Monodopsidaceae Ta... [more]
K3WSC6_GLOUD2.250e-4072.09Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4... [more]
A0A6G0XHV2_9STRA3.150e-4070.59Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
H3G531_PHYRM3.250e-4071.76Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
A0A662XDD1_9STRA3.890e-4071.76Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A1W0A9Q9_9STRA8.710e-4068.60Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
A0A8J5IQX8_9STRA1.180e-3971.76Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A835ZDN9_9STRA5.170e-3968.18Splicing factor subunit n=1 Tax=Tribonema minus Ta... [more]
F0YCR2_AURAN5.890e-3977.78Splicing factor subunit n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2188contigH-paniculata_contig2188:3689..10275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score176.0
Seed ortholog evalue7.8e-42
Seed eggNOG ortholog2880.D7FXA2
Preferred nameSF3B5
KEGG koko:K08790,ko:K12832,ko:K19485
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007276,GO:0007283,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019953,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032501,GO:0032504,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0045292,GO:0046483,GO:0048232,GO:0048609,GO:0050789,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097525,GO:0120114,GO:1901360,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG3485@1,KOG3485@2759
Ec32 ortholog descriptionSplicing factor 3B, subunit 5
Ec32 orthologEc-05_004600.1
EC2.7.11.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03000,ko03041
Exons4
Model size1277
Cds size270
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2188.5777.1prot_H-paniculata_contig2188.5777.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2188 4627..10206 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929596.7887166-UTR-H-paniculata_contig2188:3688..46261622929596.7887166-UTR-H-paniculata_contig2188:3688..4626Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 3689..4626 -
1691480929.1707811-UTR-H-paniculata_contig2188:3688..46261691480929.1707811-UTR-H-paniculata_contig2188:3688..4626Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 3689..4626 -
1622929596.8751762-UTR-H-paniculata_contig2188:10206..102751622929596.8751762-UTR-H-paniculata_contig2188:10206..10275Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 10207..10275 -
1691480929.23742-UTR-H-paniculata_contig2188:10206..102751691480929.23742-UTR-H-paniculata_contig2188:10206..10275Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2188 10207..10275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929596.8126228-CDS-H-paniculata_contig2188:4626..46831622929596.8126228-CDS-H-paniculata_contig2188:4626..4683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 4627..4683 -
1691480929.1909523-CDS-H-paniculata_contig2188:4626..46831691480929.1909523-CDS-H-paniculata_contig2188:4626..4683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 4627..4683 -
1622929596.825921-CDS-H-paniculata_contig2188:7558..76821622929596.825921-CDS-H-paniculata_contig2188:7558..7682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 7559..7682 -
1691480929.2051084-CDS-H-paniculata_contig2188:7558..76821691480929.2051084-CDS-H-paniculata_contig2188:7558..7682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 7559..7682 -
1622929596.8427858-CDS-H-paniculata_contig2188:8956..90421622929596.8427858-CDS-H-paniculata_contig2188:8956..9042Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 8957..9042 -
1691480929.2200766-CDS-H-paniculata_contig2188:8956..90421691480929.2200766-CDS-H-paniculata_contig2188:8956..9042Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 8957..9042 -
1622929596.8621933-CDS-H-paniculata_contig2188:10203..102061622929596.8621933-CDS-H-paniculata_contig2188:10203..10206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 10204..10206 -
1691480929.2289271-CDS-H-paniculata_contig2188:10203..102061691480929.2289271-CDS-H-paniculata_contig2188:10203..10206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2188 10204..10206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2188.5777.1

>prot_H-paniculata_contig2188.5777.1 ID=prot_H-paniculata_contig2188.5777.1|Name=mRNA_H-paniculata_contig2188.5777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MAANRFDINRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHLGHSDL
LCYFATAENNAVGRMRYQLLEKMLQPCGPPPARDDDDDA*
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mRNA from alignment at H-paniculata_contig2188:3689..10275-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2188.5777.1 ID=mRNA_H-paniculata_contig2188.5777.1|Name=mRNA_H-paniculata_contig2188.5777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6587bp|location=Sequence derived from alignment at H-paniculata_contig2188:3689..10275- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCCTGTCGTTTTTCCAACAAAAGAAAGTGCTGGGCAAATATCGGCTCT
AGCCTTGGATCTCGCAACAATGGTAAGTGAGGGTCCATTAGTACAAATAG
TGTATTTCGCATACCCAAAGCTAGAACATCCTAGATTCGCGACTGTAGTG
CTTACTGACTGTGGATGAGGCTTGTCGTTTTAGCTACTTGACTTCTGAGA
CGGCACAATCGCAAGGCCAAGATACACCGTCAGTAGGAACGACCAAATCA
CGGGCTGGGTTAGGCGCCTAAATTGTTTGTGCCTACTCAGAAAGATATCG
ACCCCGCCAACGCTGCTAATTGTCGAGAATCATCGGCTTCGTTGCTTTGT
GGTGCTACTGCTGTACAAACACACATAAAAATTTAGCTGCAGCATTACCG
TTACATGACGGTGTATAACACCCCCCCCCCCAGTGTTTCCCCTTGAATAT
CGCATGTCTCGTGCACCATATATATGTGCAATACAGACCTTCCTACGGCC
TGTAAAATGTATTCGAAAGCGGCCGCGTTCGGCATTGACACCCATTAGTA
GTGTCATAGTGTACCGCATAGCTCTTCTAGACGGTAGTCAGCACAAGGTA
GGCGTGGACAGCTTTGTAATTTGAAGGGCTGTGGACCGATCCATTTACGA
GATATATCGTCGATATGACGCATCAATTGGAGATCAAAACGATACCAGTA
TATTTTTTTGCCCCGCATGCTATAGTCATGGACCAATGTACGGCACACTG
AAGTCTTCACTCAGTGTAATTTTTTAGTTTGATGTTGAAAAGCGATAAAG
CCGAAAGGCGTATTTTTGGTGCCTCTGGCGGCACCTCCCTCAGCAGCCGG
CGGGAGGGGGGCGTACTAATTTTTGCATGTTGTTGTTGTTAGACTGTTGA
CCATGCGCCCTCGGCGGGGGGGAGGTCTTGCGCTTGCGCCAAAGCGCTTG
TATGGCACTTCGTGCTGTCGGCTCCCTTTGCTTGCACCAATACACACTCC
TGTTAACTTGCTGATTTTAACTCGTATTTTTCGGTGTTTGGAGTCACACC
GCTACTACAGCTGGAAAGTCGGTGGTGCCTAAGCGTGCTATAAAATCAAT
TGAGGTGCCCGCCAGTGACGCCTATTCGTCTAATGCCATAATTTTCACCA
TGACCAAGTATCTCTAATATTGCGATAGCTTCTTCCGTGTCTCTGTGCTT
GTTGTGTTGCATGTATGCCGTCCCTCGCGGTAGGCGGCGAATCGGTTCGA
CATCAACCGTAGCTGGGACCACATCCAGAACAAATATGTCGGGACAGGAC
ACTCAGACACGACCAAATTGTGAGCACACCACTATTCAGCTATCGGGGGG
GCGGTGTGGGGGAAATTTCCAAAAACTTTCAAGAAGTGGACGTTTTCCCG
TAAGAAGCGACTTCCCCGGATGTCAGAACCGTAATCCGAAACGCCTCTCT
AGAAACAGACGTCGGGTATTTTTAAGTTTCCCCTTTTTTTCTATGCCGAT
AAGAACGGCTGCCAAGCGATAATATTATTAGCGCTGGCCAACAATCTTGT
GGGCGTGGACTCTCCGTACTAGCGTGAGCGAGTGGGCAGACCGAACTTGA
TATCTTCTTCGCGTGGTAGGGCGTCAGACACGTGCCAGCATTAAATACAC
CGTTAGAACAGAACAGGGCCACAGGCAGGTGAGGTGGAAGACTGAACTGC
TCGTAGGAGGGTGCGAGGAGAGGCTCGCTCTCCTATTTCAGGAAAATGAC
AATTTACGCGGAAGAAGTTAAGCAACAATTTCGGGGAGAATGACCAAATA
GCGTGCAGAGAAGTGGGGGTGTCGGATAGAACCAGGGCTGTGAGTCACAG
TAGAAAACTTACTTCAAAGCGCATCGTATCCCTCCCTTTTCAAGTATATT
TTATTTCATGAGCGCTTCTAGCATCATGAAACAAAAGGCTGGAGGCCCCT
CAAAATGATTTGTTCGTGGCTCAAACGTATTTTATATGCGGTTCTGATGT
TGGGTTTATTCATCGCTCTATGTGGTGGTCACTGGTGTCACCAGTGTGAA
AACGAGGGTAACTGTCCTCGACAGACGTTGGGTAACTATTACCCCTTTTA
AGATGTTTTCCTCGTGTGGCCACCACATCTATCGTAGGTTTTGCACTGAT
GCATGGCTTAATCTGATCTGCGATTATTCCCTTCCTTTACAGCTATTTCC
TTTCATATTTGAAGTCTGCGACAGACGAGTGTGTGTAGTCTGTAATCGTG
AGCTACATAGCACCATTATGATATCATGTGTGTTGGAAACACTATAAATA
TCCCAAACTCATCAGATATGCGCAGACTGTTGTACTGGGATTCTAGGATG
GCTATCTGCATATTTTGTTAGTGTTCAGTGTTCTTTATATTGTCATGTTA
ATTATATGCGCGTTACACATACGAGTGATGCATGTATCCTCTCTGGTGGA
TGCAGTGATATAGAAGTCGACGTGCTCTCTCCATCCAAGCGATGCTCTTC
ATCTGGGTACTTGCCCTTGACCCCCCGCGTGCTCCCCTCTCCTGGACACA
CGTCCCACCGTGGCCGCTACCCCCTGCGCTCCCATCAACTCAGTGAATGG
GCAACAAACCAGCACCGAGACTCGATAGCGTCACATTTGGGGCACAGCGA
TCTTCTGTGCTACTTTGCGACGGCGGAAAACAACGCGGTCGGCCGCATGC
GTTACCAGCTGCTGGAGGTAACTAGTTTTTTATAAGTTACTATTTCAATA
CACTGGGGTCGTCGTCTTCGCCGTTTTGGAACATCTTTTCAAGTCTGTAC
TCAAGTAACTAGTGAAAAACGAATCTTCGTGCGAGCCCAGCGAGCCTTTG
TGGGTGGGCCGAGCACAAAGCATGGACTGCACGGATTAGCGTAGCCGTTA
CTCTACTGCCTGTGCTACATGGTGGTACAGCCATGGCCACGCTAATCCGT
GCAGTCCATGCTTTGTGCTGTTTTTCTCTTCTCTTCGTATCCATAATCCG
CATGAAACGGCTTTGCTAGATATAGACGTAATGTTAACGTAAGTTCGCTA
TTCAGTAGTTGCTTGATTTACAAAATCGAAAAACTGTTCGGAAGTAACTG
CCATCACGCTAGCGTATAAAGTTATTGAGATGAATTCAGTGCCTGTGCCG
TTCGTTTGGTACACGGCTACACCAATACAGTCTGATGAGTCGATATCCAT
GACAGGCAGGACTCATTGTGCGGTTTTTGGCTGGAAAGAAAAGAGATTAA
TAATGACAGAATAATAGCCGCTGATGAAAAACGGGAAGCAACTTTTTCGA
TGGGGACGAATTCCCACTGATTTTTCGTTAGCAACTTGGAAAATGGTGCG
ACCTGTGATGGTACATGCAGGGCTGATCGTTTCGAAGTTGTTGATGAAAA
ATCAACGACACTTCGGATCCACCGAAAAAATTGGTTGTCAATTTTCATGG
GCGACTGTTTGATGTGTATAAAATAGGAAGTTTTTATCAACCCTTTAACT
CCAATATTAACACGTTCAAGATTTTTACTGCAGGCTCACCGAATTTTGTA
AAGTAAGTCAAATGAAAACCAGGATCCGTCGATGATGAAGATACGCATGG
ACCGACCGACTGCTATCCGGGTGGCAAAATCTTATCAACCCGTAAAGACC
TCCCAATGACTACAGTTTACATTTTCTAACAATCAGTCACGAACAACGAC
ACCTGATGAACGTTATCTCAGATCCAAAACGGGGTTGGTTTCTAGGCGTT
TGGGCCTCGTTATCTTGGGTCCGGTGTAAAGTGATCACGGGCGAAGGAAG
ACCCCGGTTTATTCTAATTTTCTTAGGCCATGCACAGCTAATTAGGAGGC
CATAGGCTACTTAAGAATTCATATCGGAATAGTGGCAATTTCTTGCGATA
CTTTTCACATCCCTAATCATAATTATCAAATATTTTACTATTTTTATTAG
GTATTACTCGCTTCCAGCACGAAATGAAAAAAATCAGAATCACTCATGAT
TTCACGAAAATTATCAATTTTTAAACCTTTAGCTAAATTAGAGTTAAGTT
TGAATATTTGTTCGTTAATATAAGAACCCGAAAGCTTAAAATTAGCCAAA
CAAATGAGGCTAGACCCAATCCTGTTAATTAGAATGAAGGTCAGGGAAGA
TTGTCGCGAAATTTGGAATTATGACAGCACGAAAATACTTGGCGCTTTTC
CAAAATCCGTTCGAATCGATAGATAGCTGCATGTGAGTCATCCTGCGGTA
GGGGTGGGGTGAAGTGTTTAACTAAAGGCTACTTTGCAAAAGCGGTGCAA
AATTAACGCGAATTAAAAACATGTCATTTGCATGTGCTTATGCATCCCTA
AAGGTGTGCAATCCACAAGTTGAACTGGGACCTCTGTTTAAGGGGGGGCA
ACAGATGAAAAAAAAAAATGCGTGATCCCCATCTCAAGGGGACTCCTTCG
TTAAACAAAGTGGCTCAAATACCCCCCCCCCCCCCCCCCGTATACCGTAG
GATGACAGAGGTCTTCCACCCCTTCGTGAAGTGTTCCATTCTAGAGTAAG
AGCGCACCTCCGCATGTTTTTCTATTTTTGAGCATTCAGGTTCACTACAG
ATTGGAGGTTCGTTGAAGGTGTTTCTACTTTAAAATGGAACCTTCTTACG
AGCTGTGATATTTTTGCGCTACAGTGATGGTACGGTATGAGCACGGTTAC
CTCCGTGGAGTCATGCTTCAGTGCCTTTTCCTCGACCCAGCCACAACGAC
TCGCGTCGTGAGCTACACATGTTCAATTCGTAGTGGCTCGCTACGCCTGC
ACGAAAATTTCTCTTTTTGCACAAGTTACTTGCGTGCAGGACTTGACACC
GCTGTTTCGAGACGACGACGACGAGGACTTAGCCGTGTTGTCCCTTTCAG
AACCGGACTTCGTAACGGCCGACAGGTAGATTTGCCAGCGACCAATCGTA
AATTGTGACAAAGGCGTCGACAGAATGCCGCAACAAATTGTAGAGAACTG
GCTAGCGCACCCCGATTGCAGAGGGGGTCCGTTTTTTGCCATATTTGGGG
GTTCCATCTTGGATTTAGTGTGGAATGAGAACGGGCGCACCCTGGCTTTT
TTCGTGACGGTAAAACAATAAACGTGCATTTCACAGTTGATTAGGGGCTC
AAAAATCCCTAAGGAGTCAAGCAATTCGCATACTCTATTCCGTTATACCC
TAAAATTCTGTTGTCTAGCTACTAATACGAGTTGCATATCGAGTACTAAC
TGTTGGCCGCCGCGGGTACCCCCGTTCACAGGTTTGAGAAATTATTCTCC
TCGACGTGTATTGCTAGTTGATGCGATGTCAATGACCATTTCCTGTGCAC
GCCGTTAGACCGGGCGTCCCCGCCTGAGATATATTGAAATTTATTTACAA
GTATCGGGTCTGTCCTACAGCTGCTACCTCCGAGGTGTACCTGCTACTAG
AGGGGTGACGAATATTGTGCTCTTGTGCATGTCGGGCAGGCATTGCCTGT
GGGAACTTCTATCCGCTCAAGCGTTGGTTATTGAAATGCATCATTCCCTC
GCGCCCCGGCCCCCCATCGTTTTTCCTTTACTCTGGCCGCAGAAAATGCT
ACAGCCATGTGGACCCCCCCCGGCAAGGGACGACGACGATGATGCATGAT
GCTACTGTGCATCAGGCAACACAGCACTGAACTTCGTCGAGATCCGCGAG
AGAAGTCACTGTTTGTTTATCTCGGGGATATCTTGGTTTCGTGTTCTTGA
TTTTTCCCGTGGCTTTCGAATTATGTACTGTTTGCTTGGAAAGAGAGAGT
GTGATGAAAGACTCCCGGCTCCGGCTCCGGCTCCCCCCCCCCCCCCGGTC
CTGGGATTGCAAAAATAAGGCGATAGCAATATTAGGGGATGGAAAACGGC
GTGAATGGCGAGGGTTGGTGTAGATAGGATGGGGAAACCCTTCGTCGAGG
CACCTCTGGCAGAACAGGGAGGAGCGATTGACCATCGTCGATCGCTCCTG
TGAGAATAGCCCTTTTCTCGGTGGAGGACGCTTGATCAACGGTTTAACAA
CTAGGGCTGTCAACACCATAAAAATCATGGGTGCGCATCTCCCCTCACTC
AGTATACATACCAGTGTTGCATACCCCCTATAGGCCACTATTTTTGTACA
TCTCAGGGAGTAGCTGCCGCAGTAACAAGGAAAACATGGTTGTCGCAAAT
TCTTGCTGCCGAAAATGCCTTCCGTGCTATGGGGAATCAAGCATTTCCCC
GCATGCACCAGCCCATCCCGCCGTGGCTGTCGTGTGCTGGAACATGATAT
TTTCGAGACTTTCCCGATAGTAGTATAACTGTAGTTGCAGTATTTAGTAC
CGGATGGATGGTGCTGTAATATACAGCCCGTTAGCTCGCCCCCCAACGAT
TGCGCAGCGAGTGCGAATACGTTGTGCCAGGGCACGTCGACAATCCTCTT
CCCCCTTCTACGAGGATGATACGCACTACAGTGTCATGGTCGATTCGTTT
TCTTCCTGTAATTCCATGTCAGATAGCTATATTTCCATTACAAAGAAATA
GTTCACCGGAAATCGACTACGTACGCAAAAATGGCAC
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Coding sequence (CDS) from alignment at H-paniculata_contig2188:3689..10275-

>mRNA_H-paniculata_contig2188.5777.1 ID=mRNA_H-paniculata_contig2188.5777.1|Name=mRNA_H-paniculata_contig2188.5777.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig2188:3689..10275- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGCGGCGAATCGGTTCGACATCAACCGTAGCTGGGACCACATCCA
GAACAAATATGTCGGGACAGGACACTCAGACACGACCAAATTGCGGCGAA
TCGGTTCGACATCAACCGTAGCTGGGACCACATCCAGAACAAATATGTCG
GGACAGGACACTCAGACACGACCAAATTTGAATGGGCAACAAACCAGCAC
CGAGACTCGATAGCGTCACATTTGGGGCACAGCGATCTTCTGTGCTACTT
TGCGACGGCGGAAAACAACGCGGTCGGCCGCATGCGTTACCAGCTGCTGG
AGTGAATGGGCAACAAACCAGCACCGAGACTCGATAGCGTCACATTTGGG
GCACAGCGATCTTCTGTGCTACTTTGCGACGGCGGAAAACAACGCGGTCG
GCCGCATGCGTTACCAGCTGCTGGAGAAAATGCTACAGCCATGTGGACCC
CCCCCGGCAAGGGACGACGACGATGATGCATGAAAAATGCTACAGCCATG
TGGACCCCCCCCGGCAAGGGACGACGACGATGATGCATGA
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