mRNA_H-paniculata_contig21790.5763.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21790.5763.1
Unique NamemRNA_H-paniculata_contig21790.5763.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.610e-58
Identity = 115/214 (53.74%), Postives = 135/214 (63.08%), Query Frame = 3
Query:  141 RGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            R + EE    DVPF EVV SLMWIA  TR+ ISNAV+AV RHSHE K  HW AA KIL  L  TAHL L F R  S+DV   +    +VDA FA +  DRRSV GA +     LV W  R QK V+ ST E EY+AM DG+KEAL+V G+L   RP +K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:   23 RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLV----YVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 232          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JTP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP8_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.110e-55
Identity = 113/221 (51.13%), Postives = 136/221 (61.54%), Query Frame = 3
Query:  114 ITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTE 764
            I  SP  + R V E+    DVPF EVV  LMWIA  TR   SNAV+ V RHSHE K   W AA KIL  L+ TAHL L + +  ++DV   +    +VDA FA +  DRRSV GA +   G LV+WF   QK V+LST E EY+AM DG+KEAL+V G+L   RP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++
Sbjct:   46 IPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLV----YVDADFASKATDRRSVSGALVRVAGCLVSWFAWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSK 262          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.800e-55
Identity = 114/223 (51.12%), Postives = 138/223 (61.88%), Query Frame = 3
Query:  114 ITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            I  SP  + R V E+    DVPF EVV  LMWIA  TR   SNAV+ V RHSHE K   W AA KIL  L+ TAHL L + +  ++DV   +    +VDA FA +  DRRSV GA +L  G LV+WF   QK V+LST E EY+AM DG+KEA +V G+L   RP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:  141 IPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLV----YVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 359          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.190e-55
Identity = 112/211 (53.08%), Postives = 130/211 (61.61%), Query Frame = 3
Query:  150 NEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLSS-KHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            NEE    DVPF EVV  LMWIA  TR  ISNAV+AV RHSHE K  HW AA KIL  L  TAHL LNF R  S+DV   +    +V A FA +  DRRSV GA +   G LV W  R QK V  ST E EY+AM DG+KEAL+  G+L   RP  K   I   EDN+GA  L +NPLS    KHID++HHFLR L     I + HVS++E+
Sbjct:    3 NEEAG--DVPFREVVGCLMWIACQTRPDISNAVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLV----YVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQ 207          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 4.890e-54
Identity = 113/223 (50.67%), Postives = 134/223 (60.09%), Query Frame = 3
Query:  114 ITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            I  SP  + R V E+    DVPF EVV SLMWIA  TR  ISNA++AVVRHSHE K  HW AA KIL  L  TAHL L F   +S+D    +    +VDA FA + NDRRSV GA +L     V W  + QK V+ S  E EY AM DG+K+AL+V G+L   RP      I   EDN+ A  L  NPLS S SKHID++HHFLR L     I V HV +EE+
Sbjct:   85 IPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNALRAVVRHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLV----YVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSISEAEYFAMGDGVKKALFVNGMLQFLRPSANPRKIDVLEDNEEAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQ 303          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.020e-54
Identity = 115/223 (51.57%), Postives = 139/223 (62.33%), Query Frame = 3
Query:  114 ITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWG---ILRPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            I  SP  + R V E+    DVPF EVV  LMWIA  TR   SNAV+ V RHSHE K   W AA KIL  L+ TAHL L + +  ++DV   +    +VDA FA +  DRRSV GA +L  G LV+WF   QK V+LST E EY+AM DG+KEAL+V G   +LRP  K   I  FEDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:  481 IPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLV----YVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 699          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 1.420e-53
Identity = 122/265 (46.04%), Postives = 154/265 (58.11%), Query Frame = 3
Query:    9 IGCDSYLRSAPIHLLPLSWDN-------KDTFIHHRGLPARIITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            +GC+ Y+R      + +S ++       +   +    +PA +         R + EE    DVPF EVV SLMWIA  TR+ ISNAV+AV RHSHE K  HW AA KIL  L  TAHL L F R  S+DV   +    +VDA FA +  DRRSV GA +     LV W  R QK V+ ST E+EY+AM DG+KEAL+V G+L   RP +K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct:  911 LGCE-YIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDD-----RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLV----YVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 1165          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.660e-53
Identity = 100/215 (46.51%), Postives = 136/215 (63.26%), Query Frame = 3
Query:  132 LELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALY---VWGILRPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTE 764
            ++L   +E     DVPF E+V SLMW+A  TR  I+NAV+AV R+    K +HW AA  IL  ++ T+ +G+ F R     V   + +  FVDA +A +  DRRSV G  ++CGG  VTWF R QK VTLST E EYVA+AD LKE L+   VW  + P      I  FEDN+GA ++ +NP++ S SKHID++HHF+RELV  ++I + HV T+
Sbjct:  139 VKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFER----GVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQ 349          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.740e-53
Identity = 117/223 (52.47%), Postives = 137/223 (61.43%), Query Frame = 3
Query:  114 ITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            I  SP  + R V E+    DVPF EVV SLMWIA  TR  ISNAV+AV RHSHE K  HW AA KIL  L  TAHL L F   +S+D    +    +VDA FA + NDRRSV GA +L     V W  + QK V+ ST E EY+AM DG+KEAL+V G+L   RP  K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV +EE+
Sbjct:  716 IPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLV----YVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQ 934          
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 2.030e-53
Identity = 122/265 (46.04%), Postives = 153/265 (57.74%), Query Frame = 3
Query:    9 IGCDSYLRSAPIHLLPLSWDN-------KDTFIHHRGLPARIITHSPLLELRGVNEEGTVVDVPF*EVVASLMWIAELTRSHISNAVQAVVRHSHESKGIHWIAACKILECLQATAHLGLNFSRRDSLDVEVKLELDTFVDAGFA*RTNDRRSVLGASILCGGALVTWFFRKQKSVTLSTIETEYVAMADGLKEALYVWGIL---RPKMKFLGISAFEDNKGAKELTNNPLSLS-SKHIDIQHHFLRELVANEDIMVKHVSTEEE 770
            +GC+ Y+R      + +S ++       +   +    +PA +         R + EE    DVPF EVV SLMWIA  TR+ ISNAV+AV RHSHE K  HW AA KIL  L  TAHL L F R  S+DV   +    +VDA FA +  DRRSV GA +     LV W  R QK V+ ST E EY+AM DG+KEAL+V G+L   RP +K   I   EDN+GA  L  NPLS S SKHID++HHFLR L     I V HV ++E+
Sbjct: 1121 LGCE-YIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDD-----RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLV----YVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQ 1375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21790.5763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCG6_9PHAE1.610e-5853.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTP8_9PHAE1.110e-5551.13Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE1.800e-5551.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JW47_9PHAE3.190e-5553.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBM6_9PHAE4.890e-5450.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE5.020e-5451.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3I1_9PHAE1.420e-5346.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.660e-5346.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE1.740e-5352.47Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KZH7_9PHAE2.030e-5346.04Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21790contigH-paniculata_contig21790:3..827 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size825
Cds size237
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21790.5763.1prot_H-paniculata_contig21790.5763.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21790 551..787 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929594.5919328-UTR-H-paniculata_contig21790:2..5501622929594.5919328-UTR-H-paniculata_contig21790:2..550Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21790 3..550 +
1691480928.0289946-UTR-H-paniculata_contig21790:2..5501691480928.0289946-UTR-H-paniculata_contig21790:2..550Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21790 3..550 +
1622929594.618727-UTR-H-paniculata_contig21790:787..8271622929594.618727-UTR-H-paniculata_contig21790:787..827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21790 788..827 +
1691480928.0544531-UTR-H-paniculata_contig21790:787..8271691480928.0544531-UTR-H-paniculata_contig21790:787..827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21790 788..827 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929594.6047144-CDS-H-paniculata_contig21790:550..7871622929594.6047144-CDS-H-paniculata_contig21790:550..787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21790 551..787 +
1691480928.0417843-CDS-H-paniculata_contig21790:550..7871691480928.0417843-CDS-H-paniculata_contig21790:550..787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21790 551..787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21790.5763.1

>prot_H-paniculata_contig21790.5763.1 ID=prot_H-paniculata_contig21790.5763.1|Name=mRNA_H-paniculata_contig21790.5763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
MADGLKEALYVWGILRPKMKFLGISAFEDNKGAKELTNNPLSLSSKHIDI
QHHFLRELVANEDIMVKHVSTEEESLIL*
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mRNA from alignment at H-paniculata_contig21790:3..827+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21790.5763.1 ID=mRNA_H-paniculata_contig21790.5763.1|Name=mRNA_H-paniculata_contig21790.5763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=825bp|location=Sequence derived from alignment at H-paniculata_contig21790:3..827+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCGATAAATTGGGTGTGACTCATATTTGCGGAGTGCACCGATTCACTTG CTTCCTCTCTCCTGGGATAATAAAGACACGTTCATCCACCACCGCGGCCT ACCGGCCAGAATTATCACACACTCCCCGTTGCTGGAACTTAGGGGAGTAA ACGAGGAGGGGACCGTGGTGGATGTGCCGTTCTGAGAGGTGGTCGCGAGC CTTATGTGGATCGCCGAACTGACTCGATCCCACATATCTAACGCAGTGCA AGCGGTGGTGCGACATTCTCATGAATCCAAGGGTATCCATTGGATTGCAG CCTGTAAGATCTTGGAGTGTCTGCAGGCAACGGCACATCTCGGTCTGAAC TTTTCACGGAGGGATAGTTTGGATGTAGAGGTAAAACTCGAGCTGGACAC TTTTGTAGACGCAGGTTTTGCCTAGAGGACGAATGATCGGCGTTCGGTAT TAGGGGCTTCTATTTTATGTGGAGGAGCTTTAGTAACCTGGTTTTTTAGG AAACAGAAAAGTGTGACATTGTCTACTATAGAGACGGAGTACGTAGCAAT GGCAGATGGATTAAAGGAAGCTCTGTATGTTTGGGGTATTTTGAGGCCGA AAATGAAATTTTTAGGAATTTCGGCTTTCGAGGATAACAAGGGTGCAAAA GAACTGACGAACAATCCGCTGAGCTTGTCGAGCAAACATATTGATATTCA ACACCACTTCTTGCGCGAGTTGGTGGCGAACGAAGATATTATGGTAAAGC ACGTTTCAACGGAAGAGGAATCGCTGATACTCTGACGAAGGCATGCGGGA GAAAGAACTTCGAGTTACACCGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig21790:3..827+

>mRNA_H-paniculata_contig21790.5763.1 ID=mRNA_H-paniculata_contig21790.5763.1|Name=mRNA_H-paniculata_contig21790.5763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig21790:3..827+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAGATGGATTAAAGGAAGCTCTGTATGTTTGGGGTATTTTGAGGCC
GAAAATGAAATTTTTAGGAATTTCGGCTTTCGAGGATAACAAGGGTGCAA
AAGAACTGACGAACAATCCGCTGAGCTTGTCGAGCAAACATATTGATATT
CAACACCACTTCTTGCGCGAGTTGGTGGCGAACGAAGATATTATGGTAAA
GCACGTTTCAACGGAAGAGGAATCGCTGATACTCTGAATGGCAGATGGAT
TAAAGGAAGCTCTGTATGTTTGGGGTATTTTGAGGCCGAAAATGAAATTT
TTAGGAATTTCGGCTTTCGAGGATAACAAGGGTGCAAAAGAACTGACGAA
CAATCCGCTGAGCTTGTCGAGCAAACATATTGATATTCAACACCACTTCT
TGCGCGAGTTGGTGGCGAACGAAGATATTATGGTAAAGCACGTTTCAACG
GAAGAGGAATCGCTGATACTCTGA
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