prot_H-paniculata_contig2179.5761.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2179.5761.1
Unique Nameprot_H-paniculata_contig2179.5761.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length121
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2179.5761.1 vs. uniprot
Match: A0A836CNA7_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 5.890e-17
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:   43 LGPGERLRRVVCPEFFFPGAMIGPAGTLLDPEEGNNHRHTLFAVIPSVVLVIDREDMRSFSYANPGVFMAIHDLMFV 119
            +G GE  RRV CP  F PG +IG +G L+  E G  H+HTL    P+ VL+++R+ M  FS  NPGVF++IHDLMFV
Sbjct:  839 MGDGESRRRVRCPAEFHPGTLIGRSGPLISAE-GGTHKHTLRCKTPATVLLVERDRMHYFSINNPGVFLSIHDLMFV 914
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2179.5761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CNA7_9STRA5.890e-1751.95Cyclic nucleotide-binding domain-containing protei... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 2..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2179contigH-paniculata_contig2179:3677..7653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2179.5761.1mRNA_H-paniculata_contig2179.5761.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2179 1916..7679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2179.5761.1 ID=prot_H-paniculata_contig2179.5761.1|Name=mRNA_H-paniculata_contig2179.5761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MVWEVGSPVTHVVIVAEGRLRFHMNDEILPLMNGSCPQMGRRLGPGERLR
RVVCPEFFFPGAMIGPAGTLLDPEEGNNHRHTLFAVIPSVVLVIDREDMR
SFSYANPGVFMAIHDLMFVC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like